Morgan Feeney
morganella.bsky.social
Morgan Feeney
@morganella.bsky.social
Microbiologist and teaching fellow. Fond of the cool things bacteria do. Likes baking, shape-note singing, crafts, earrings, shiny things. Was @mostlymicrobia on Twitter. She/her.
Reposted by Morgan Feeney
Come and work with me and @ariannebabina.bsky.social on #Streptomyces evolution and antibiotic production

Origins of a tangled bank: Adaptation and evolution in antibiotic-producing Streptomyces

www.gla.ac.uk/postgraduate...

please repost
University of Glasgow - Postgraduate study - Centres for Doctoral Training - NorthWest Biosciences - Our Projects - Underpinning Bioscience - Paul A Hoskisson
www.gla.ac.uk
September 30, 2025 at 11:02 AM
What a lovely way to brighten up the day!!!
September 2, 2025 at 12:59 PM
Super super super recommend Grace Petrie's Fringe show - two nights left!!! Absolutely brilliant!! www.edfringe.com/tickets/what...
Wheelchair Access, Wheelchair Accessible Toilets
www.edfringe.com
August 12, 2025 at 4:53 PM
Reposted by Morgan Feeney
Our new preprint is out! EEC1 is a massive 4.2 Mb secondary chromosome from Embleya australiensis. Conserved across Embleya, these are the first replicons of their kind in Actinobacteria and the largest secondary replicons in bacteria identified to-date!

1/6 🦠🧪🧬🔬

www.biorxiv.org/content/10.1...
Evidence supporting the first secondary chromosome in actinobacteria as a hallmark of the Embleya genus
Embleya is a genus within the family Streptomycetaceae, a group of actinobacteria with outstanding capacity for production of specialised metabolites and a strikingly complex life cycle. In this work, we sequenced the complete genome of the new species Embleya australiensis MST-11070 and validated the assembly using optical mapping. The genome of E. australiensis MST-11070 consists of a 7.1 Mb linear chromosome and three additional replicons, including a 4.2 Mb linear replicon, EEC1, significantly larger than all previously described secondary replicons from bacteria. EEC1 is typified by its similar composition to the chromosome in terms of GC-content, codon usage and gene functions. It also carries terminal inverted repeats identical to the chromosome. EEC1 is enriched in biosynthetic gene clusters (BGCs), including the only copy of the BGCs for the spore pigment and the surfactant peptide SapB, metabolites essential for the organism's lifecycle. EEC1 contains an origin of replication with at least some chromosomal properties, and its replication is likely to depend on functions provided by chromosomally located genes. Further comparison of Embleya spp. genomes suggests that EEC1-like replicons are conserved across the genus, in contrast to other known large linear extrachromosomal replicons (megaplasmids) in the order. EEC1 is thus a hallmark of the Embleya genus and is central to its evolution within the Streptomycetaceae family. We propose EEC1 as a secondary chromosome, distinct from previously described secondary chromosomes that utilise plasmid-like replication mechanisms (chromids) and the largest secondary replicon reported in bacteria, to date. ### Competing Interest Statement Ernest Lacey is a Founder, Board Member, and the Managing Director of Microbial Screening Technology Pty. Ltd. The authors declare no competing financial interests. Biotechnology and Biological Sciences Research Council, https://ror.org/00cwqg982, BB/P021506/1, BBS/E/J/000PR9790, BB/X01097X/1, BB/M011216/1 Novo Nordisk Foundation, https://ror.org/04txyc737, NNF22OC0078997
www.biorxiv.org
July 9, 2025 at 11:56 AM
Reposted by Morgan Feeney
“Changing how many chromosomes your host has?? Phages shouldn’t have that power” — my labmate
One of my favourite serendipitous results from the lab came about because we were long-read sequencing bacterial:

Vibrio cholerae, which is "supposed to" have TWO circular chromosomes (3 + 1 million base pairs) often has just ONE fused chromosome (4 Mbp).

www.nature.com/articles/s41...

(1/n)
Prevalent chromosome fusion in Vibrio cholerae O1 - Nature Communications
The pathogenic bacterium Vibrio cholerae typically has two circular chromosomes. Here, Cuénod et al. analyse 467 clinical isolates and identify several independent chromosome fusion events that are li...
www.nature.com
July 1, 2025 at 6:01 PM
Reposted by Morgan Feeney
Great news - this work is now published!! Big congrats to @yeowjiang.bsky.social - amazing that he mastered cryo-EM and now solved his 2nd set of strs! And kudos to Chee Geng (& Nadege) for non-trivial homogeneous purification of TolQRA!

pubs.acs.org/doi/10.1021/...

#MicroSky #SGBUG 1/4
July 2, 2025 at 5:58 AM
Reposted by Morgan Feeney
I'm excited to share the final version of some fun work from our lab. A few interesting phenotypes - depleting host glutathione causes intracellular Rickettsia to form long chains and get restricted by antibacterial autophagy. Congrats to the team!

urldefense.com/v3/__https:/...
Host glutathione is required for Rickettsia parkeri cell division and intracellular survival
Nature Communications - Rickettsia species are bacterial pathogens that obligately reside in the host cell cytosol. Here, Sun et al. report that Rickettsia use host glutathione as a nutrient source...
urldefense.com
July 1, 2025 at 5:03 PM
Reposted by Morgan Feeney
Thank you to everyone who has used pyani over the years (I know it's thousands of people!) but we have now archived the repository.

But we have replaced it with a completely rewritten and extended implementation: pyani-plus!

github.com/pyani-plus/p...

1/
han solo from star wars is pointing at the camera in a room .
ALT: han solo from star wars is pointing at the camera in a room .
media.tenor.com
July 1, 2025 at 2:04 PM
Reposted by Morgan Feeney
Just learned that Frank Stahl (of the Meselson and Stahl DNA replication experiment ("the most beautiful experiment in biology") died at the beginning of April, to no fanfare. Here's a lovely video of them reminiscing: www.youtube.com/watch?v=7-tn...
The Most Beautiful Experiment: Meselson and Stahl
YouTube video by Science Communication Lab
www.youtube.com
June 26, 2025 at 10:01 AM
Reposted by Morgan Feeney
Thanks so much for everyone who came out in person or online to hear me talk about our LLM course today at UNSW.

thebullshitmachines.com
June 25, 2025 at 6:54 AM
Reposted by Morgan Feeney
Extended Shine-Dalgarno motifs govern translation initiation in Staphylococcus aureus. On non-canonical start codons, leader peptide, codon rarity, ribosome pausing 🦠 #microsky #rnasky #ribosome www.biorxiv.org/content/10.1...
Extended Shine-Dalgarno motifs govern translation initiation in Staphylococcus aureus
Regulation of translation initiation is central to bacterial adaptation, but species-specific mechanisms remain poorly understood. We present high-resolution mapping of translation start sites in S. a...
www.biorxiv.org
June 25, 2025 at 7:19 AM
Reposted by Morgan Feeney
Reposted by Morgan Feeney
A bacterial regulatory uORF senses multiple classes of ribosome-targeting antibiotics
elifesciences.org/articles/101...
A bacterial regulatory uORF senses multiple classes of ribosome-targeting antibiotics
An upstream open-reading frame in Escherichia coli regulates expression of the downstream genes in response to diverse translation stresses.
elifesciences.org
June 3, 2025 at 7:05 AM
Reposted by Morgan Feeney
How does your favorite species elongate? 🧵 "Phenotypic plasticity in bacterial elongation among closely related species". Happy to see this paper in print @natcomms.nature.com. Nice work by @mariedelaby.bsky.social, Liu Yang et al. See original 🧵, different colours, same data and conclusions.
June 2, 2025 at 3:54 PM
Reposted by Morgan Feeney
Ahem (clears throat). We are pleased to announce:

✨ 🧑🏾‍🔬 Black In Micro Week Returns 🦠
Get ready for October 2025!! Stay tuned for *abstract* submissions and full *program* info released this summer. COMING SOON.

We're Baaaaaack #BlackInMicro #BiM2025 #BlackInMicrobiology
May 13, 2025 at 3:14 PM
Reposted by Morgan Feeney
One of my favorite history of science books: "Brave Genius"

It's about Jacques Monod, discoverer of the lac operon, who risked everything to fight fascism/Nazis as a part of the French Resistance, along with his buddy Albert Camus.

Be like Jacques.

www.penguinrandomhouse.com/books/213596...
Brave Genius by Sean B. Carroll: 9780307952349 | PenguinRandomHouse.com: Books
The never-before-told account of the intersection of some of the most insightful minds of the 20th century, and a fascinating look at how war, resistance, and friendship can catalyze genius.  ...
www.penguinrandomhouse.com
May 13, 2025 at 5:08 AM
Reposted by Morgan Feeney
"Researchers recruited to work in the UK have to fund a £1,035 annual immigration health surcharge, which must be paid in full in advance, as well as up to £1,519 in visa fees. For a family of four, the upfront costs can total almost £30,000."
“The visa fees are so exceedingly high that it makes coming here very difficult for some people. We are fishing for the best scientists in the world. They want to come and work here because we are such an effective country at science, but if we have these high costs, they can and will go elsewhere.”
Is the UK paying the price for world’s most expensive visas? | The Observer
Competing political and economic goals on immigration are resulting in the loss of valuable skills and talent in the UK
observer.co.uk
May 12, 2025 at 10:05 AM
Reposted by Morgan Feeney
I am extremely pleased to share this feature articulating why I have lost my sanity lately. www.science.org/content/arti...
U.S. scientists’ lives and careers are being upended. Here are five of their stories
As the second Trump administration sends U.S. science into upheaval, countless researchers are fighting for their futures
www.science.org
May 3, 2025 at 10:23 PM
Reposted by Morgan Feeney
"That telomere phages are so prevalent means that they are a selective force, one that we know little about. We now want to understand how the telomere-toxin is secreted and also understand how this ‘telocin’ wheedles its way into unsuspecting bacterial neighbors”

www.science.org/doi/10.1126/...
Telomere bacteriophages are widespread and equip their bacterial hosts with potent interbacterial weapons
Klebsiella host strains infected with telomere phages can grow to be the dominant lineage in mixed populations.
www.science.org
May 1, 2025 at 10:04 PM
Reposted by Morgan Feeney
The public won't feel the effects of this for years to decades, so it's hard to garner broad support as the other issues do. But the damage will be lasting and far less reversible, and will affect people's daily lives.
The destruction of American science by Trump and the GOP is a far more important story and will be remembered in history far longer than his screw-ups on the economy with tariffs.
April 28, 2025 at 4:16 PM
Reposted by Morgan Feeney
There's an open call for editors (5-year terms) at Applied and Environmental Microbiology, for those of you who might be interested:

journals.asm.org/journal/aem/...
journals.asm.org
April 28, 2025 at 6:49 AM
Reposted by Morgan Feeney
Long-range #genome interactions in #bacteria. In #Ecoli, 6 out of 7 rRNA #operons cluster by an unknown mechanism. This study shows that high expression of sigma factors σH or FecI, localized in the inner membrane, disrupts clustering, an effect suppressed by σD @plosbiology.org 🧪 plos.io/44b4vQd
April 23, 2025 at 11:23 AM