Julieth Murillo
dynamicnetworks.bsky.social
Julieth Murillo
@dynamicnetworks.bsky.social
Computational Biologist.

Cambridge, UK
Reposted by Julieth Murillo
If anyone lost a bag of books from LRB Bookshop on the Metropolitan Line between Baker St- Watford, I handed it to a cleaner when the train terminated at Watford tube station. And if you have far more followers than me, please share this status. LRB bookshop is not cheap!
November 1, 2025 at 5:05 PM
Reposted by Julieth Murillo
Innate immunity of the lungs in homeostasis and disease www.mucosalimmunology.org/article/S193...
September 26, 2025 at 1:04 PM
Reposted by Julieth Murillo
How do parasites strategically organise their genomes to influence gene expression? If you’re curious, check our latest review in @cp-trendsparasitol.bsky.social !

@biologyatyork.bsky.social @ybri-uoy.bsky.social @pasteur.fr

www.sciencedirect.com/science/arti...
August 11, 2025 at 6:40 AM
Reposted by Julieth Murillo
Applying skills gained in one context to different situations enables efficient #learning, even from limited data. This Primer explores a @plosbiology.org study which shows that the #DefaultModeNetwork plays a key role in this ability 🧪 Paper: plos.io/41LOAWf Primer: plos.io/417aTpd
August 18, 2025 at 4:47 PM
Reposted by Julieth Murillo
Early immune education mechanisms remain poorly understood. This Primer explores a @plosbiology.org study which uses math modeling to provide mechanistic insights into how the infant #ImmuneSystem learns to distinguish beneficial & harmful #microbes 🧪 Paper: plos.io/4lsJ8i5 Primer: plos.io/4oHrDNI
August 18, 2025 at 4:47 PM
Reposted by Julieth Murillo
New video summary 🎥 from Leddy et al. @thebrysonlab.bsky.social (rupress.org/jem/article/... ) on a new workflow called PathMHC that helps find pathogen-derived antigens presented on MHCs by infected cells that could be targets for T cell priming vaccines:
Targeting infection-specific peptides in immunopeptidomics studies for vaccine target discovery
Original paper: https://rupress.org/jem/article/222/10/e20250444/278135/Targeting-infection-specific-peptides-in Video summary by Owen Leddy (Massachusetts Institute of Technology) Description: One…
youtu.be
August 18, 2025 at 6:15 PM
Reposted by Julieth Murillo
My PhD student @leonielorenz.bsky.social (with Eva Geissen) has made this nice (free) online course to introduce mathematical modelling for biology:
www.ebi.ac.uk/training/onl...

Including both molecular and epidemiological examples
Mathematical modelling for biologists - Modelling concepts in biological research
Mathematical modelling for biologists - Modelling concepts in biological research
www.ebi.ac.uk
August 15, 2025 at 10:39 AM
Reposted by Julieth Murillo
This paper took the scenic route to publication: paused for maternity leave, rerouted by other work priorities, and finally dusted off like a forgotten treasure in the attic when my brilliant student Amy came on board.
The role of environmentally mediated drug resistance in facilitating the spatial distribution of residual disease
Communications Biology - Mechanistic modelling of tumour-stroma crosstalk sheds light on how targeted drug dynamics and microenvironmental heterogeneity shape residual disease through distinct...
rdcu.be
August 14, 2025 at 8:50 AM
Reposted by Julieth Murillo
Please sign this Parliamentary petition calling for comprehensive trade sanctions on Israel - the limited sanctions on specific members of the Israeli Government by the UK do not go far enough: petition.parliament.uk/petitions/72...
Petition: Review all trade ties with Israel, suspend 2030 roadmap & impose trade sanctions
We call on the Government to review existing trade ties with Israel, suspend the 2030 Roadmap for UK-Israel bilateral relations and impose trade sanctions upon Israel.
petition.parliament.uk
August 5, 2025 at 6:09 PM
Reposted by Julieth Murillo
Mathematical models are essential tools for exploring the complex interplay between #cancer cells and their environment, but require expertise and abundant data to develop. Lance Munn & Rakesh Jain suggest that #AI is leading the way towards the next wave of tumor models 🧪 plos.io/4ofREUk
Challenges and opportunities for the next generation of computational tumor models
Mathematical models have become essential tools for exploring the complex interplay between cancer cells and their microenvironment, but require multidisciplinary expertise and abundant biological dat...
plos.io
August 5, 2025 at 4:15 PM
Reposted by Julieth Murillo
Job ads for TWO postdoctoral positions available in our group are now online. Deadline August 25th.
🧪Immunologists, apply in link below.
🍄Microbiologists- please follow link in next post.
edzz.fa.em3.oraclecloud.com/hcmUI/Candid...
Research Fellow - Department of Immunology and Immunotherapy - 106119 - Grade 7
The successful candidate will make extensive use of a range of in vivo models of fungal infection and will have access to the wide range of transgenic tools and in vivo immunology techniques establish...
edzz.fa.em3.oraclecloud.com
July 30, 2025 at 12:15 PM
Reposted by Julieth Murillo
I'm excited about a new @biorxivpreprint.bsky.social story that just went live! This one takes a #computational #immunology approach to understanding #tissueresident lymphocytes. The story highlights the extra value mathematical modelling can bring to biology. 🧵1/10

www.biorxiv.org/content/10.1...
Probabilistic migration events drive transient tissue residency of lymphocytes during homeostasis
Tissue-resident lymphocytes form a phenotypically and functionally distinct analog to the corresponding circulatory lymphocyte populations. Residential CD8 T cells, in particular, are identified as having prolonged residence in the tissues and key functions in recall responses at tissue-environmental interfaces, although the dwell time in individual tissues has yet to be resolved. Residential CD4 T cells, regulatory T cells, B cells, and NK cells have been demonstrated to share phenotypic properties with residential CD8 T cells, but the migratory kinetics are even more poorly defined. Here we used probabilistic modelling on a large parabiosis dataset, covering multiple time-points and tissues, to calculate migration kinetics and dwell times of multiple lymphocyte subsets across a diverse set of tissues. Markov chain modelling identified distinct cell type-specific and tissue-specific residency patterns. The liver and gut were prone to prolonged residency compared to other tissue types, and a hierarchy of residency was observed with CD8 T cells and NK cells demonstrating longer residency than CD4 conventional T cells and regulatory T cells, which in turn resided in tissues longer than B cells. With few exceptions, however, average residency was at least an order of magnitude shorter than the life-span of the mouse, indicating a more dynamic form of steady-state tissue residency than usually assumed. Together these data provide a comprehensive model of a pan-tissue shared program in lymphocyte tissue residence, as well as identifying cell type- and organ-specific modification of the migratory kinetics. ### Competing Interest Statement The authors have declared no competing interest. Wellcome Trust, https://ror.org/029chgv08, 222442/Z/21/Z European Research Council, TissueTreg
www.biorxiv.org
July 9, 2025 at 8:17 AM
Reposted by Julieth Murillo
Amidst the blizzard of news, this is hardly being reported but will make the biggest difference in peoples' lives www.bbc.co.uk/news/article...
Family hubs to open in every council in England
Government says £500m plan aims to support an extra half a million more children.
www.bbc.co.uk
July 6, 2025 at 6:19 AM
Reposted by Julieth Murillo
“The NHS waiting list has fallen to its lowest level in two years, the first April drop since 2008”

www.england.nhs.uk/2025/06/nhs-...
NHS England » NHS waiting list hits two-year low as staff work to ‘turn the tide’
The NHS waiting list has fallen to its lowest level in two years, the first April drop since 2008*, as health chiefs hailed staff for continuing to tackle demand and drive progress for patients. New d...
www.england.nhs.uk
July 6, 2025 at 11:33 AM
Reposted by Julieth Murillo
From the same team that made vanilla for ice cream using E.coli that digest plastic waste.
This is wild!
Engineering E. coli bacteria to turn plastic waste into paracetamol (Tylenol)
www.nature.com/articles/s41...
www.nature.com/articles/s41...
June 24, 2025 at 11:42 AM
Reposted by Julieth Murillo
🔬 Day 1 of the EMBO Practical Course on Computational Modelling of Multicellular Systems kicks off at the Collaboratorium!

Participants were welcomed by @jamesasharpe.bsky.social, setting the stage for a week of exploring how computational tools help us understand tissue and organ dynamics. 💻🧬
June 14, 2025 at 3:27 PM
Reposted by Julieth Murillo
Polygenic scores (PGS) offer insights into a person’s inherited risk of disease.

GeneticScores.org is a new platform that enables secure, cloud-based calculation of polygenic scores to make genomic risk prediction more accessible.

www.ebi.ac.uk/about/news/u...

🖥️🧬
June 9, 2025 at 11:21 AM
Reposted by Julieth Murillo
I've just heard our group of runners for @scotrefugeecouncil.bsky.social have almost raised a collective £15K!!!

We are just under £500 off our target!

My JustGiving page closes on Sunday... can we do it before?!!

All shares/donations count!

Thank you!! ❤️❤️❤️

www.justgiving.com/page/amy-mci...
May 30, 2025 at 11:46 AM
Reposted by Julieth Murillo
🚨New vacancy at @cam.ac.uk🚨

The Department of Medicine at the University of Cambridge is looking for an Assistant Teaching Professor and Course Director for the new MPhil in Translational Medical Research.

📩 Apply by 22 June:
Assistant Teaching Professor and Course Director, MPhil in Translational Medical Research (Fixed Term) - Job Opportunities - University of Cambridge
Assistant Teaching Professor and Course Director, MPhil in Translational Medical Research (Fixed Term) in the Department of Medicine at the University of Cambridge.
buff.ly
May 28, 2025 at 10:01 AM
Reposted by Julieth Murillo
🚨 Abstract Deadline - Friday 30th May

There are 10 days left to submit your abstract for EMDS2025. We have >20 selected talk slots - so submit an abstract today!

All details & programme: www.emds2025.com

@britsocimm.bsky.social @societymucosalimm.bsky.social @cytokinesociety.bsky.social
May 20, 2025 at 5:36 AM
Reposted by Julieth Murillo
Big news for health data research and population diversity: The Mexico City Prospective Study data are now available securely to approved researchers worldwide. www.ndph.ox.ac.uk/news/latin-a...

Cohort description: www.ctsu.ox.ac.uk/research/pro...
Latin-American genetic data available securely to approved researchers worldwide/Datos genéticos latinoamericanos disponibles para investigadores de todo el mundo
www.ndph.ox.ac.uk
May 2, 2025 at 9:05 AM
Reposted by Julieth Murillo
⚠️ Course deadline extension ⚠️

The last day to apply for the AI@MBL course this summer is now April 30!
📲 Read more and apply: bit.ly/43vIT0u

#ScienceStartsHere
April 16, 2025 at 10:26 PM
Reposted by Julieth Murillo
Tissue-specific improvements in CD4+ T cell responses after treatment for visceral leishmaniasis. https://www.biorxiv.org/content/10.1101/2025.04.13.648617v1
April 14, 2025 at 4:15 AM
Reposted by Julieth Murillo
Join us for this @dgz.bsky.social seminar online with very cool talks about the Cell biology of the immune system

There will be of course some #CellMigration of leukocytes ;)

Speakers: @liz-kurtz.bsky.social, #ZahraaA, @labliston.bsky.social and #StefanU
The next #DGZ Focus Workshop on #CellBiology of the #ImmuneSystem will take place on April 29, organized by @pjsaez.bsky.social & Evi Kiermaier – join us! 🧑‍🔬🧑‍🔬🧬
April 11, 2025 at 2:49 PM
Reposted by Julieth Murillo
📆 Don't forget to join us TOMORROW, Friday, April 11, for a special MBL Falmouth Forum with Paul Catanzaro!

His talk will begin at 7:30 p.m. in the MBL's Lillie Laboratory. Can't make it in person? That's okay, we'll be streaming live! mbl.edu/falmouth-forum
April 10, 2025 at 7:11 PM