Zerina Balic
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zerinabalic.bsky.social
Zerina Balic
@zerinabalic.bsky.social
Weill Cornell PhD Student studying cranial neural crest development in the Tommy Vierbuchen Lab (@tvierbuchen.bsky.social) at MSK Cancer Center
Reposted by Zerina Balic
📣 Paper alert!

I am delighted that our paper exploring the impact of Neanderthal-derived variants on the activity of a disease-associated craniofacial enhancer has been published in Development today!
journals.biologists.com/dev/article/...
November 10, 2025 at 11:11 AM
Reposted by Zerina Balic
Epithelial-to-mesenchymal transition or EMT is an integral part of development in animals. In this beautifully illustrated review from the lab of Magali Suzanne, they describe and compare and contrast the cellular mechanism of EMT across the different model organisms.
doi.org/10.1016/j.cd...
September 12, 2025 at 4:15 PM
Reposted by Zerina Balic
I'm really happy to announce that my two main postdoctoral works have been published in the same issue of Developmental Cell! First, the final form of the mouse cortical organoid protocol (tinyurl.com/bddfmx8n), which I recently presented at Development presents (tinyurl.com/36udcpme) and…
tinyurl.com
August 27, 2025 at 4:25 PM
Reposted by Zerina Balic
A mouse organoid platform for modeling cerebral cortex development and cis-regulatory evolution in vitro: Developmental Cell www.cell.com/developmenta...
August 27, 2025 at 3:09 PM
Reposted by Zerina Balic
Excited to share our new study in @cp-devcell.bsky.social dissecting how the brain-associated transcription factor OTX2 drives anteriorization of the mammalian gut by enhancer remodeling using stem cell-based models. #development #enhancers #patterning #stemcells

www.cell.com/developmenta...
Enhancer remodeling by OTX2 directs specification and patterning of mammalian definitive endoderm
Correct patterning of emerging tissues in the developing embryo is essential for the formation of functional organ systems. Using genetic tools for controlled protein depletion, Ee et al. identify the...
www.cell.com
August 19, 2025 at 6:14 PM
Reposted by Zerina Balic
Thrilled to share that our latest work on marsupial heterochrony is now online at @cp-devcell.bsky.social @cellpress.bsky.social @lab-turner.bsky.social @crick.ac.uk We used scRNAseq to understand the asynchronous progression of developmental programmes in marsupials www.cell.com/developmenta...
Marsupial single-cell transcriptomics identifies temporal diversity in mammalian developmental programs
Menchero et al. generate a single-cell transcriptomic atlas in the opossum and show rapid progression of transcriptional programs in specific tissues relative to morphological landmarks. This shift in...
www.cell.com
July 24, 2025 at 5:07 PM
Reposted by Zerina Balic
🐣✨ TUJ1 staining reveals the forming trigeminal ganglion in a chick embryo! Image taken by Rocio Márquez from @pstrobl.bsky.social lab, where they investigate how neural crest and placode cells communicate during the formation of this sensory structure 🔬🧪
#FluorescenceFriday
July 18, 2025 at 1:27 PM
Reposted by Zerina Balic
I gave in! After students asking for it, I now made a simple figure design checklist.
To help all scientists w/o graphic skills create clear, accessible, and truthful charts!
-> Out in @nature Cell Biology: rdcu.be/erwl4

#DataVisualization #PhD #SciComm

Thx for review @bethcimini.bsky.social + 2
A checklist for designing and improving the visualization of scientific data
Nature Cell Biology - Creating clear and engaging scientific figures is crucial to communicate complex data. In this Comment, I condense principles from design, visual perception and data...
rdcu.be
June 18, 2025 at 8:33 AM
Reposted by Zerina Balic
New paper from my group is out. We demonstrate that cranial neural crest (CNCC) induction requires the transcription factor SALL4 to physically recruit the BAF chromatin remodeller at CNCC-induction enhancers as early as at the neuroectodermal stage:
www.biorxiv.org/content/10.1...
Neural crest induction requires SALL4-mediated BAF recruitment to lineage specific enhancers
Neural crest induction begins early during neural plate formation, requiring precise transcriptional control to activate lineage-specific enhancers. Here, we demonstrate that SALL4, a transcription fa...
www.biorxiv.org
June 10, 2025 at 7:25 PM
Reposted by Zerina Balic
Super fun to se my photo on the cover of the latest issue of Developmental Dynamics. Sox10 expression in a common wall lizard embryo in somite stage 37 visualized with in situ hybridization. #EvoDevo #NeuralCrest #DevBio
Read the paper here: doi.org/10.1002/dvdy...
June 7, 2025 at 2:36 PM
Reposted by Zerina Balic
A RUNX2 GFP reporter is expressed prior to osteochondral differentiation and models Metaphyseal Dysplasia with Maxillary Hypoplasia and Brachydactyly (MDMHB) https://www.biorxiv.org/content/10.1101/2025.05.15.654100v1
May 15, 2025 at 1:31 PM
Reposted by Zerina Balic
Excited to share our latest manuscript, a collaboration with @justinperryphd.bsky.social led by Weill Cornell Neuroscience PhD student @annbaako.bsky.social. Ann developed a new, improved mouse PSC model for studying tissue-resident macrophage differentiation.

www.biorxiv.org/content/10.1...
Modeling tissue-resident macrophage development from mouse pluripotent stem cells
Tissue-resident macrophages (TRMs) are innate immune cells that participate in tissue development, homeostasis, and immune surveillance. Extensive efforts have been made to recapitulate TRM developmen...
www.biorxiv.org
May 13, 2025 at 7:37 PM
Reposted by Zerina Balic
Modeling tissue-resident macrophage development from mouse pluripotent stem cells https://www.biorxiv.org/content/10.1101/2025.05.01.651743v1
May 5, 2025 at 1:30 PM
Big congratulations to my amazing lab mate Rachel on her successful thesis defense!!
March 26, 2025 at 10:43 PM
Reposted by Zerina Balic
New study shows genetic variation affects DNA #hypomethylation & imprint deregulation in naïve PSCs. Genetic variants may be potential biomarkers for epigenetically stable PSCs. ow.ly/aCVY50VilVY

@isscr.org @gairdnerawards.bsky.social @sickkidsvs.bsky.social
March 14, 2025 at 7:21 PM
Reposted by Zerina Balic
Our collaborative project with Matthias Stadtfeld and Jason Mezey labs has now been published. We examined how genetic variation impacts regulation of DNA methylation at the control regions of imprinted genes in naive pluripotent stem cells.

www.cell.com/stem-cell-re...
Genetic variation modulates susceptibility to aberrant DNA hypomethylation and imprint deregulation in naive pluripotent stem cells
Pluripotent stem cells are susceptible to acquiring detrimental epigenetic abnormalities, posing a hurdle to their safe use in biomedical applications. Using pluripotent cells with defined genetic backgrounds, Stadtfeld and colleagues show that genetic variation is a major driver of epigenome stability and identify candidate regulators. These findings will enable novel approaches to stabilize the epigenome of pluripotent cells in culture.
www.cell.com
March 13, 2025 at 8:01 PM
Reposted by Zerina Balic
You know how until recently drugs were mostly tested only in men? And they had to change regulations to include women (and btw they are trying to turn those back...)

Turns out? Same is true for CATS and dogs! Most vet work is in DOGS. www.nytimes.com/2025/03/11/s... by @emilyanthes.bsky.social
Why Are Cats Such a Medical Black Box?
Many aspects of feline health remain a mystery, even to experts. Our cat-owning reporter learned this the hard way.
www.nytimes.com
March 12, 2025 at 1:35 PM
Reposted by Zerina Balic
In Science, researchers detail a nanoscale-resolution reconstruction of a millimeter-scale fragment of human cerebral cortex, giving an unprecedented view into the structural organization of brain tissue at the supracellular, cellular, and subcellular levels. scim.ag/3FvpAKy #BrainAwarenessWeek
March 11, 2025 at 2:08 PM
Reposted by Zerina Balic
Agree and thank you for doing this important work, @labonnelab.bsky.social!

Listen here: podcasts.apple.com/us/podcast/o...
March 8, 2025 at 11:00 PM
Reposted by Zerina Balic
NEW HUBBLE IMAGE SHOWING TWO GALAXIES INTERACTING 🤩
March 9, 2025 at 7:11 PM
Reposted by Zerina Balic
March 7, 2025 at 5:16 PM
Reposted by Zerina Balic
When you've been in the cell culture hood all day and finally get to take off your gloves:
March 6, 2025 at 8:21 PM
Reposted by Zerina Balic
Researchers have developed a model to study why sensory neuron axons regenerate differently.
buff.ly/4ijksHC
March 1, 2025 at 9:21 AM
Reposted by Zerina Balic
Paper out !!🥳big thanks to all authors @marliesoomen.bsky.social @diego-rt.bsky.social @kaessmannlab.bsky.social @jonathangoeke.bsky.social @lorenzamottes.bsky.social & 'bluesky-less'

Lots of interesting new TE (& genes) biology

Data fully browsable💻 👉 embryo.helmholtz-munich.de/shiny_embryo/
February 21, 2025 at 3:50 PM