Yoann Santin
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ysantin.bsky.social
Yoann Santin
@ysantin.bsky.social
Ph.D. in Microbiology, post-doc at @UCLouvain_be in the @LalouxLab @EMBO fellow #Bdellovibrio, former in @CascalesLab #T6SS
Reposted by Yoann Santin
I am thrilled to share with you the outcome of the first collaboration with Albesa-Jove's lab (albesalab.org), in which we characterised the molecular mechanisms underlying the binding of a T6SS adaptor-effector pair in P. putida, Tap3–Tke5. (🧵1/9). Read the full paper here: doi.org/10.1038/s443...
January 14, 2026 at 11:38 AM
Reposted by Yoann Santin
🚨L'ENS de Lyon recrute un.e maître de conférence qui rejoindra le CIRI pour développer ses recherches sur l'immunité bactérienne, les transferts horizontaux et les MGE.

📖 Une très belle opportunité d'enseigner à des étudiants brillants tout en menant des recherches excitantes !
📢 Recruitment of an Associate Professor (Maître de conférences) in Bacteriology at CIRI and ENS de Lyon.
Research at @ciri-lyon.bsky.social @francoisrousset.bsky.social
@labxc.bsky.social
Anti-phage Immunity, Horizontal gene/ MGE transfer
📚 Teaching at ENS de Lyon within the Department of Biology.
January 14, 2026 at 5:02 PM
Reposted by Yoann Santin
New bioRxiv preprint from our Lesterlin lab
How early gene expression coupled to DNA processing boosts resistance plasmid spread.
With @nfrk92.bsky.social in collab with Y. Yamaichi lab
👉 doi.org/10.64898/202...
Coupling DNA processing to early gene expression drives antibiotic resistance plasmid dissemination
The rapid global spread of antibiotic resistance is mediated by conjugative plasmids, yet how these elements establish immediately after entering new bacterial hosts remains poorly understood. Here we...
doi.org
January 12, 2026 at 8:56 AM
Reposted by Yoann Santin
We have an open POSTDOC position to explore Marchantia immune receptor biology that is closing on the 18th of Jan. Apply using the link below, and/or email me for more details. www.jic.ac.uk/vacancies/po...
Postdoctoral Researcher (Carella Group) | John Innes Centre
An exciting opportunity has arisen for a Postdoctoral Researcher to join the Carella Group at the John Innes Centre, working on cutting-edge science in the field of Evo-MPMI (Evolutionary Molecular…
www.jic.ac.uk
January 13, 2026 at 11:31 AM
Reposted by Yoann Santin
💊 We are excited to share our preprint that describes an inhibitor of the widespread and highly conserved Two-Partner Secretion (TPS) system that is critical for Gram-negative pathogens to export a multitude of diverse virulence factors.

(1/6)

www.biorxiv.org/content/10.6...
First inhibitor of a bacterial two-partner secretion system.
Two-partner secretion system transporter proteins (TpsB) are widely conserved across Gram-negative pathogens. TpsB family proteins secrete exoprotein virulence factors that perform a myriad of functions such as adhesion and immune modulation. Despite their incredible importance in bacterial infectious disease, TpsB inhibitors have not yet been discovered. Here, we describe a potent inhibitor of FhaC, a TpsB protein produced by Bordetella spp . FhaC secretes the exoprotein FhaB that is essential for the establishment of whooping cough. We designed a peptide called P1 that we predicted would prevent substrate binding and lock FhaC in a secretion-inactive state. Simulations and biochemical assays supported our hypothesis and identified interactions important for P1 binding to FhaC. Strikingly, we observed that the peptide strongly inhibited FhaB secretion from clinical isolates and broadly reduced correlates of virulence. Together, this work provides a strong case for further development of a novel class of anti-TpsB anti-virulence compounds. ### Competing Interest Statement The authors have declared no competing interest. National Institute of Allergy and Infectious Diseases, R21AI180112
www.biorxiv.org
January 13, 2026 at 7:02 AM
Reposted by Yoann Santin
Une opportunité unique de former des étudiants talentueux à la biologie des bactéries à l'ENS Lyon et mener des recherches sur les phages, l'immunité bactérienne, le transfert génétique horizontal (HGT) et/ou les éléments génétiques mobiles au sein du département de bactériologie du CIRI.
📢 Recruitment of an Associate Professor (Maître de conférences) in Bacteriology at CIRI and ENS de Lyon.
Research at @ciri-lyon.bsky.social @francoisrousset.bsky.social
@labxc.bsky.social
Anti-phage Immunity, Horizontal gene/ MGE transfer
📚 Teaching at ENS de Lyon within the Department of Biology.
January 13, 2026 at 2:01 PM
Reposted by Yoann Santin
I am beyond excited to announce that the Bisson Lab has a new home!!! Starting January 2026, I will join the Biology Department at Indiana University Bloomington as Associate Professor with tenure.

I am actively recruiting scientists across all levels. More in our website: bissonlab.com/join

[1/4]
December 24, 2025 at 5:10 PM
Reposted by Yoann Santin
We are looking for a team leader to join the cryo-EM facility work at the new Ernst Ruska-Centre 2.0 at the Forschungszentrum Jülich. We have a series of microscopes used by (@irene-vercellino.bsky.social, Schröder, @sachsegroup.bsky.social) and external users.
www.fz-juelich.de/de/karriere/...
Team Leader – Life Science Cryo-Electron Microscopy (Cryo-EM) Facility
Ernst Ruska-Centre for Microscopy and Spectroscopy with Electrons (ER-C) at Forschungszentrum Jülich houses some of the world`s most advanced electron microscopes and tools for nanocharacterisation. U...
www.fz-juelich.de
December 23, 2025 at 9:42 AM
Reposted by Yoann Santin
Preprint alert📢! 
Ever wondered how much bacterial parasites influence evolutionary outcomes of their host?
➡️ We co-evolved two bacterial strains in conditions in which the costs and benefits of prophage carriage varied

Here is what we found. 
www.biorxiv.org/content/10.6...
#MicroSky #PhageSky
🧵
Environment-dependent evolution drives divergent adaptive strategies and parasite dynamics in a minimal community
Prophages, phage genomes integrated into bacterial chromosomes, are widespread, yet, the extent to which these resident parasites contribute to host fitness and shape evolutionary trajectories, partic...
www.biorxiv.org
December 18, 2025 at 2:11 PM
Reposted by Yoann Santin
"The changing roles of Escherichia coli" -- a short essay by yours truly.

rdcu.be/eVtXT
The changing roles of Escherichia coli
Nature Microbiology - Richard Lenski traces the legacy of Escherichia coli and how science is evolving to use this model organism in new ways.
rdcu.be
December 19, 2025 at 1:57 PM
Reposted by Yoann Santin
What is better than one? Two connected papers!

#NewResearch

S protein of Streptococcus pneumoniae activates PBP1a and coordinates with a wider GpsB-associated multi-protein complex to regulate peptidoglycan remodelling and cell division.

#MicroSky 🦠

www.nature.com/articles/s41...
December 19, 2025 at 2:06 PM
Reposted by Yoann Santin
Final version is out! Our large-scale cryo-ET dataset 🔬 of Chlamydomonas reinhardtii 🦠 is now published in @cp-molcell.bsky.social

Huge collaborative effort! So glad to see the community already using it to develop new resources & tools.

Check it out here: shorturl.at/z4i4c
#CryoEM #CryoET
December 19, 2025 at 4:45 PM
Reposted by Yoann Santin
Happy to share the last work of @jmartinkus.bsky.social, led by @dukasju.bsky.social
Immunity arrays associated with Rhs and CDI toxins and linked to a novel genetic element (XPC cassette) confer protection against competitors. @currentbiology.bsky.social
Kudos !!
www.cell.com/current-biol...
Poly-immunity arrays associated with Rhs toxins confer wide protection against competitors
Martinkus et al. show that Photorhabdus and Xenorhabdus species encode arrays of immunity genes whose protein products neutralize toxins secreted by competitors. These arrays, often linked to Xer pass...
www.cell.com
December 15, 2025 at 5:02 PM
Reposted by Yoann Santin
Our new paper on DusB’s role in redox metabolism in V. cholerae is now out in @narjournal.bsky.social linking tRNAmodif enzymes and metabolic adaptation.

Beyond RNA modification: a tRNA-modifying enzyme shaping oxidative stress resilience and metabolism in V. cholerae #rnasky #rnabiology

😊🦠💫
Beyond RNA modification: a novel role for tRNA modifying enzyme in oxidative stress response and metabolism
Abstract. RNA modifications play a fundamental role in regulating essential cellular processes, including translation fidelity and stress adaptation. While
academic.oup.com
December 13, 2025 at 8:57 PM
Reposted by Yoann Santin
Temporal and spatial coordination of DNA segregation and cell division in an archaeon
#microbiology #DNA #archaea
@pnas.org
www.pnas.org/doi/abs/10.1...
Temporal and spatial coordination of DNA segregation and cell division in an archaeon | PNAS
Cells must coordinate DNA segregation with cytokinesis to ensure that each daughter cell inherits a complete genome. Here, we explore how DNA segre...
www.pnas.org
December 14, 2025 at 10:30 AM
Reposted by Yoann Santin
In two-week time, it will be 10 years of our group. I have not regretted once joining Mol Micro Dept and more widely the John Innes Centre.
Molecular Microbiology Dept Christmas lunch at the assembly House in Norwich 12/12/25. Blessed to work with great scientists who are also great people. This photo only shows the group leaders but every person in the department is wonderful. #microsky
December 13, 2025 at 12:19 PM
Reposted by Yoann Santin
Health effects of ultra-processed food:
uncovering causal mechanisms

"Multiple factors are suspected to explain detrimental effects of UPFs, beyond their nutritional profile, including food additives."

www.nature.com/articles/s41...
December 12, 2025 at 11:24 PM
Reposted by Yoann Santin
📣 2nd meeting of France-BioImaging Mechanobiology Working Group

📆 March 26-27th, 2026
📍Institut Jacques Monod, Buffon amphitheater

Registration are open until December 31st 🔗 buff.ly/cVzaoId

@upcite.bsky.social @sbcf.bsky.social @gdraqv.bsky.social @cnrsbiologie.bsky.social @psl-univ.bsky.social
2nd meeting of France-BioImaging Mechanobiology Working Group
The second meeting of the FBI Mechanobiology WG will take place on the 26 and 27 of March 2026 at the Institut de Biologie Paris Seine and the Institut Jacques Monod in Paris. The programme will in…
france-bioimaging.org
November 27, 2025 at 3:26 PM
Reposted by Yoann Santin
Just got word that we are a go for the Bacterial Cell Biology and Development GRS and GRC at Southern New Hampshire University!

GRS will be on June 5-6, 2027

GRC will be from June 6-11, 2027

Block off your calendars Prokaryotic Cell Biologists!

More details to come! Please repost!
December 12, 2025 at 2:58 PM
Reposted by Yoann Santin
An article about @qedscience.bsky.social this time in @lemonde.fr 🍷 Would you prefer to get feedback on your paper in French? Lots of scientists in France are q.e.ding❤️https://www.lemonde.fr/sciences/article/2025/12/10/l-evaluation-des-articles-scientifiques-bouleversee-par-l-ia_6656706_1650684.html
December 12, 2025 at 5:18 PM
Reposted by Yoann Santin
🚨PhD position alert🚨

🔬Cryo-EM? ✅ 🧫Membrane proteins? - we've got 165 TMs for you! ✅

Join me and the team👥 in beautiful Amsterdam🚴 to untangle the amazing mycobacterial protein secretion machinery!

📝Apply here: tinyurl.com/mmxnfpnw

📆Deadline: 23 January

#PhDstudent #T7SS #cryoEM #newPI
Vacature — PhD candidate; Mechanism and assembly of type VII secretion system machineries
We are looking for an enthusiastic and motivated PhD candidate to join Dr. Catalin Bunduc’s team in the Molecular Microbiology Section of the Amsterdam Institute for Life and Environment (A-LIFE).
tinyurl.com
December 12, 2025 at 3:06 PM
Reposted by Yoann Santin
Subcellular organization of the archaeal cell
#archaea #microbiology sciencedirect.com/science/arti...
December 9, 2025 at 8:56 AM
Reposted by Yoann Santin
🔬 Call to create junior research groups at the Institut Pasteur

Focus: Infectious diseases, host-microbe interactions, vaccines
Special interest: AI methodologies

📅 Deadline: Feb 9, 2026
👥 2-12 years post-PhD

Apply now 📝 research.pasteur.fr/en/call/crea...

#JobOpportunity #Research
Creation of new junior research groups at the Institut Pasteur - Call for applications 2026 - Research
The Institut Pasteur is launching an international call to recruit new junior research group leaders leveraging cutting-edge transdisciplinary approaches to exploring infectious diseases, host-microbe...
research.pasteur.fr
December 8, 2025 at 8:53 AM
Reposted by Yoann Santin