Sarvenaz Sarabipour
@ssarabipour.bsky.social
Computational Systems Biologist | Assistant Professor at UConn School of Medicine
Reposted by Sarvenaz Sarabipour
HELP! Please suggest a cool paper/preprint in your field in the last year or so.
For a course I teach, I am collecting papers on: cell/dev bio, microbio, neuro, maths/stats/CS/chem/phys applied to biology.
1/2
For a course I teach, I am collecting papers on: cell/dev bio, microbio, neuro, maths/stats/CS/chem/phys applied to biology.
1/2
December 11, 2025 at 1:19 PM
HELP! Please suggest a cool paper/preprint in your field in the last year or so.
For a course I teach, I am collecting papers on: cell/dev bio, microbio, neuro, maths/stats/CS/chem/phys applied to biology.
1/2
For a course I teach, I am collecting papers on: cell/dev bio, microbio, neuro, maths/stats/CS/chem/phys applied to biology.
1/2
Reposted by Sarvenaz Sarabipour
bioRxiv, medRxiv, openRxiv stickers, pens, camera covers, window clings, magnets and one remaining T-shirt at booth 1134 at #cellbio2025 - last chance today!
December 9, 2025 at 3:00 PM
bioRxiv, medRxiv, openRxiv stickers, pens, camera covers, window clings, magnets and one remaining T-shirt at booth 1134 at #cellbio2025 - last chance today!
Reposted by Sarvenaz Sarabipour
openRxiv is Amazing 🤩 read and post preprints, read and offer feedback on preprints on bioRxiv/medRxiv website at the speed of science.
with 8-10 million daily views of the website, your work is sure to be found, read and cited, even more than many journal websites!
with 8-10 million daily views of the website, your work is sure to be found, read and cited, even more than many journal websites!
December 8, 2025 at 5:01 PM
openRxiv is Amazing 🤩 read and post preprints, read and offer feedback on preprints on bioRxiv/medRxiv website at the speed of science.
with 8-10 million daily views of the website, your work is sure to be found, read and cited, even more than many journal websites!
with 8-10 million daily views of the website, your work is sure to be found, read and cited, even more than many journal websites!
OpenRxiv presentation & panel by John Inglis & Sam Hindle #CellBio2025
over 348,000 preprints on bioRxiv/medRxiv, 11,000 have open peer reviews, 3,000 have community reviews on preprint dashboard.
over 348,000 preprints on bioRxiv/medRxiv, 11,000 have open peer reviews, 3,000 have community reviews on preprint dashboard.
December 8, 2025 at 4:40 PM
OpenRxiv presentation & panel by John Inglis & Sam Hindle #CellBio2025
over 348,000 preprints on bioRxiv/medRxiv, 11,000 have open peer reviews, 3,000 have community reviews on preprint dashboard.
over 348,000 preprints on bioRxiv/medRxiv, 11,000 have open peer reviews, 3,000 have community reviews on preprint dashboard.
Reposted by Sarvenaz Sarabipour
#LivingArchitectures
We put cells and cytoskeleton filaments on the architecture of the musée d'Orsay.
www.musee-orsay.fr/fr/agenda/ev...
Scientists of the #CytoMorphoLab adapted their protocols to illustrate the questions that keep them awake at night.
-> Two shows on the 24th and 25th of January.
We put cells and cytoskeleton filaments on the architecture of the musée d'Orsay.
www.musee-orsay.fr/fr/agenda/ev...
Scientists of the #CytoMorphoLab adapted their protocols to illustrate the questions that keep them awake at night.
-> Two shows on the 24th and 25th of January.
December 5, 2025 at 4:11 PM
#LivingArchitectures
We put cells and cytoskeleton filaments on the architecture of the musée d'Orsay.
www.musee-orsay.fr/fr/agenda/ev...
Scientists of the #CytoMorphoLab adapted their protocols to illustrate the questions that keep them awake at night.
-> Two shows on the 24th and 25th of January.
We put cells and cytoskeleton filaments on the architecture of the musée d'Orsay.
www.musee-orsay.fr/fr/agenda/ev...
Scientists of the #CytoMorphoLab adapted their protocols to illustrate the questions that keep them awake at night.
-> Two shows on the 24th and 25th of January.
Reposted by Sarvenaz Sarabipour
Today, our animation synthesizing decades of research on actin-mediated endocytosis in budding yeast was published:
journals.biologists.com/jcs/article/...
The result of a fantastic Iwasa-Drubin lab collaboration.
@margotriggi.bsky.social @jiwasa.bsky.social
movie.biologists.com/video/10.124...
journals.biologists.com/jcs/article/...
The result of a fantastic Iwasa-Drubin lab collaboration.
@margotriggi.bsky.social @jiwasa.bsky.social
movie.biologists.com/video/10.124...
December 2, 2025 at 9:02 PM
Today, our animation synthesizing decades of research on actin-mediated endocytosis in budding yeast was published:
journals.biologists.com/jcs/article/...
The result of a fantastic Iwasa-Drubin lab collaboration.
@margotriggi.bsky.social @jiwasa.bsky.social
movie.biologists.com/video/10.124...
journals.biologists.com/jcs/article/...
The result of a fantastic Iwasa-Drubin lab collaboration.
@margotriggi.bsky.social @jiwasa.bsky.social
movie.biologists.com/video/10.124...
Reposted by Sarvenaz Sarabipour
We mapped the whole human fallopian tube in 3D and at single-cell resolution via our CODA workflow.
More about this work here: biorxiv.org/content/10.1...
More about this work here: biorxiv.org/content/10.1...
December 3, 2025 at 2:24 AM
We mapped the whole human fallopian tube in 3D and at single-cell resolution via our CODA workflow.
More about this work here: biorxiv.org/content/10.1...
More about this work here: biorxiv.org/content/10.1...
Reposted by Sarvenaz Sarabipour
Our next extraordinary biologist is the columnist who writes under the pseudonym ‘Mole', a regular contributor to @jcellsci.bsky.social for over 20 years. #100biologists
December 2, 2025 at 12:49 PM
Our next extraordinary biologist is the columnist who writes under the pseudonym ‘Mole', a regular contributor to @jcellsci.bsky.social for over 20 years. #100biologists
Reposted by Sarvenaz Sarabipour
THIS. In all the discussions about Publish-Review-Curate, alt peer review models, etc., too often the other things (good) journals (should) do are often omitted. Information verification and many other checks are as, if not more important, journals.plos.org/plosbiology/...
November 3, 2025 at 2:26 PM
THIS. In all the discussions about Publish-Review-Curate, alt peer review models, etc., too often the other things (good) journals (should) do are often omitted. Information verification and many other checks are as, if not more important, journals.plos.org/plosbiology/...
Reposted by Sarvenaz Sarabipour
IT'S HAPPENING! 💥 I'm psyched to launch the collaboration between @qedscience.bsky.social & @openrxiv.bsky.social @biorxivpreprint.bsky.social! Preprint + q.e.d = your science is out there, and anyone can appreciate it. Let's care about making discoveries, and not on “getting published” (1/3) 👇
November 6, 2025 at 2:49 PM
IT'S HAPPENING! 💥 I'm psyched to launch the collaboration between @qedscience.bsky.social & @openrxiv.bsky.social @biorxivpreprint.bsky.social! Preprint + q.e.d = your science is out there, and anyone can appreciate it. Let's care about making discoveries, and not on “getting published” (1/3) 👇
Reposted by Sarvenaz Sarabipour
We have written two reviews providing a practical guide and fundamentals of cell migration:
(1) How to select an optimal cell migration assay,
(2) How to analyze cell migration data.
We also added a perspective on AI methods of analysis.
Coming out soon in Nature Methods.
(1) How to select an optimal cell migration assay,
(2) How to analyze cell migration data.
We also added a perspective on AI methods of analysis.
Coming out soon in Nature Methods.
November 8, 2025 at 6:17 PM
We have written two reviews providing a practical guide and fundamentals of cell migration:
(1) How to select an optimal cell migration assay,
(2) How to analyze cell migration data.
We also added a perspective on AI methods of analysis.
Coming out soon in Nature Methods.
(1) How to select an optimal cell migration assay,
(2) How to analyze cell migration data.
We also added a perspective on AI methods of analysis.
Coming out soon in Nature Methods.
Reposted by Sarvenaz Sarabipour
Excited to launch an openRxiv partnership with the scientist-run AI review service qed (@qedscience.bsky.social), the brainchild of @odedrechavi.bsky.social 1/n
openrxiv.org/enabling-rev...
openrxiv.org/enabling-rev...
Enabling options for review: from training and transparency to author-centered AI tools - openRxiv
Peer review is widely viewed as a critical aspect of biomedical communication. Ideally, it provides authors with feedback so they can improve manuscripts and gives readers, particularly nonspecialists...
openrxiv.org
November 6, 2025 at 2:32 PM
Excited to launch an openRxiv partnership with the scientist-run AI review service qed (@qedscience.bsky.social), the brainchild of @odedrechavi.bsky.social 1/n
openrxiv.org/enabling-rev...
openrxiv.org/enabling-rev...
Reposted by Sarvenaz Sarabipour
Evidence from 14 research funding programmes confirms that early winners tend to keep winning (Matthew effect). But the idea that an early setback makes you stronger later doesn’t replicate widely.
buff.ly/UEtcRd4
buff.ly/UEtcRd4
November 5, 2025 at 11:28 PM
Evidence from 14 research funding programmes confirms that early winners tend to keep winning (Matthew effect). But the idea that an early setback makes you stronger later doesn’t replicate widely.
buff.ly/UEtcRd4
buff.ly/UEtcRd4
Reposted by Sarvenaz Sarabipour
Always great to see peer review experiments with actual data. SolvingForScience distinguish Quality (Q) & Impact (I) scores for papers. Q scores are based on a peer-improvement phase, followed by an I assessment by a different group. Unsurprisingly I varies more than Q 1/2
doi.org/10.1101/2025...
doi.org/10.1101/2025...
November 5, 2025 at 10:59 PM
Always great to see peer review experiments with actual data. SolvingForScience distinguish Quality (Q) & Impact (I) scores for papers. Q scores are based on a peer-improvement phase, followed by an I assessment by a different group. Unsurprisingly I varies more than Q 1/2
doi.org/10.1101/2025...
doi.org/10.1101/2025...
Reposted by Sarvenaz Sarabipour
Where Parisians post their preprints…
October 31, 2025 at 6:28 PM
Where Parisians post their preprints…
Reposted by Sarvenaz Sarabipour
Calling all #Membrane enthusiasts!
Our #MembraneTrafficking online seminar series is back for the 2025-26 season: 8 fantastic speakers from Nov'25 to Feb'26.
The first talks are already next Thursday (Nov 6, 5pm CET) with @agatawitkowska.bsky.social and @abdourachidthiam.bsky.social !
Our #MembraneTrafficking online seminar series is back for the 2025-26 season: 8 fantastic speakers from Nov'25 to Feb'26.
The first talks are already next Thursday (Nov 6, 5pm CET) with @agatawitkowska.bsky.social and @abdourachidthiam.bsky.social !
October 27, 2025 at 5:02 PM
Calling all #Membrane enthusiasts!
Our #MembraneTrafficking online seminar series is back for the 2025-26 season: 8 fantastic speakers from Nov'25 to Feb'26.
The first talks are already next Thursday (Nov 6, 5pm CET) with @agatawitkowska.bsky.social and @abdourachidthiam.bsky.social !
Our #MembraneTrafficking online seminar series is back for the 2025-26 season: 8 fantastic speakers from Nov'25 to Feb'26.
The first talks are already next Thursday (Nov 6, 5pm CET) with @agatawitkowska.bsky.social and @abdourachidthiam.bsky.social !
Reposted by Sarvenaz Sarabipour
We're hiring several tenure-track biomedical engineering faculty (at open rank) at IU Bloomington! Come join me in a very multidisciplinary, forward-focused culture that integrates cutting-edge engineering, computing, and artificial intelligence. 🧪
indiana.peopleadmin.com/postings/30517
indiana.peopleadmin.com/postings/30517
Multiple, Open Rank, Tenure-Track/Tenured Faculty Positions in Biomedical Engineering
Indiana University Bloomington (IUB) is engaged in a multi-year initiative to increase the breadth and scope of its faculty in biomedical engineering. We are inviting applications for multiple tenure-...
indiana.peopleadmin.com
October 3, 2025 at 6:58 PM
We're hiring several tenure-track biomedical engineering faculty (at open rank) at IU Bloomington! Come join me in a very multidisciplinary, forward-focused culture that integrates cutting-edge engineering, computing, and artificial intelligence. 🧪
indiana.peopleadmin.com/postings/30517
indiana.peopleadmin.com/postings/30517
Reposted by Sarvenaz Sarabipour
Our latest ‘call for preLighters’ closes tonight!
Interested, but didn’t find the time to write an application? Expressions of interest are also welcome – just email us at prelights@biologists.com
Why join? See what other preLighters have to say…⬇️👀
Interested, but didn’t find the time to write an application? Expressions of interest are also welcome – just email us at prelights@biologists.com
Why join? See what other preLighters have to say…⬇️👀
September 30, 2025 at 12:25 PM
Our latest ‘call for preLighters’ closes tonight!
Interested, but didn’t find the time to write an application? Expressions of interest are also welcome – just email us at prelights@biologists.com
Why join? See what other preLighters have to say…⬇️👀
Interested, but didn’t find the time to write an application? Expressions of interest are also welcome – just email us at prelights@biologists.com
Why join? See what other preLighters have to say…⬇️👀
Reposted by Sarvenaz Sarabipour
I and other participants of the Novel Approaches to Preventing Publication Bias Workshop, hosted by the NINDS Office of Research Quality in May 2024, have published a framework to encourage the publication of null results in science: 🧪
journals.plos.org/plosbiology/...
journals.plos.org/plosbiology/...
Ending publication bias: A values-based approach to surface null and negative results
Sharing knowledge is a fundamental principle within the scientific community, yet null and negative results are still being underreported. This Consensus View discusses the problem of such publication...
journals.plos.org
September 24, 2025 at 6:21 PM
I and other participants of the Novel Approaches to Preventing Publication Bias Workshop, hosted by the NINDS Office of Research Quality in May 2024, have published a framework to encourage the publication of null results in science: 🧪
journals.plos.org/plosbiology/...
journals.plos.org/plosbiology/...
Reposted by Sarvenaz Sarabipour
Let's get negative about scholarly publishing – a new paper (first in a long time for me!) on proposals to tackle the problem of publication bias that emerged from a NINDS workshop held in May last year.
occamstypewriter.org/scurry/2025/... [Direct link to paper: journals.plos.org/plosbiology/...
occamstypewriter.org/scurry/2025/... [Direct link to paper: journals.plos.org/plosbiology/...
Let’s get negative about scholarly publishing | Reciprocal Space
occamstypewriter.org
September 24, 2025 at 6:16 PM
Let's get negative about scholarly publishing – a new paper (first in a long time for me!) on proposals to tackle the problem of publication bias that emerged from a NINDS workshop held in May last year.
occamstypewriter.org/scurry/2025/... [Direct link to paper: journals.plos.org/plosbiology/...
occamstypewriter.org/scurry/2025/... [Direct link to paper: journals.plos.org/plosbiology/...
Reposted by Sarvenaz Sarabipour
bioRxiv partners with Dryad to enable easier, better linking to curated datasets connect.biorxiv.org/news/2025/09...
Dryad partnership brings easier data sharing to bioRxiv
bioRxiv - the preprint server for biology, operated by Cold Spring Harbor Laboratory, a research and educational institution
connect.biorxiv.org
September 18, 2025 at 7:43 PM
bioRxiv partners with Dryad to enable easier, better linking to curated datasets connect.biorxiv.org/news/2025/09...
Reposted by Sarvenaz Sarabipour
Next Thursday Sept 25 (4-6pm CET) we have our first #FocalPlaneFeatures together with our #membranetrafficking community! Thanks to all who submitted such exciting abstracts. The final program is out, featuring a keynote by Gillian Griffiths. Register here: focalplane.biologists.com/2025/09/16/f...
September 16, 2025 at 4:03 PM
Next Thursday Sept 25 (4-6pm CET) we have our first #FocalPlaneFeatures together with our #membranetrafficking community! Thanks to all who submitted such exciting abstracts. The final program is out, featuring a keynote by Gillian Griffiths. Register here: focalplane.biologists.com/2025/09/16/f...
Reposted by Sarvenaz Sarabipour
openRxiv response to the NIH RFI: adopt Plan U connect.biorxiv.org/news/2025/09...
openRxiv response to NIH Request for Information on Maximizing Research Funds by Limiting Allowable Publishing Costs
bioRxiv - the preprint server for biology, operated by Cold Spring Harbor Laboratory, a research and educational institution
connect.biorxiv.org
September 15, 2025 at 4:32 PM
openRxiv response to the NIH RFI: adopt Plan U connect.biorxiv.org/news/2025/09...
Reposted by Sarvenaz Sarabipour
To expand the Fast & Fair peer review experiment to more subject areas, we are inviting our community members to join the Biology Open peer reviewer pool. Your participation and commitment are key to the success of this initiative. Apply at bit.ly/428Cszt
#fastandfairpeerreview
#fastandfairpeerreview
September 8, 2025 at 9:40 AM
To expand the Fast & Fair peer review experiment to more subject areas, we are inviting our community members to join the Biology Open peer reviewer pool. Your participation and commitment are key to the success of this initiative. Apply at bit.ly/428Cszt
#fastandfairpeerreview
#fastandfairpeerreview
Reposted by Sarvenaz Sarabipour
🚨 New call for preLighters!🚨
Help us highlight the most exciting biological #preprints. Share your insights, build your profile, and be part of a supportive community! 🌍
Interested? Apply today & help shape the future of science publishing! 📢
More info: prelights.biologists.com/news/join-th...
Help us highlight the most exciting biological #preprints. Share your insights, build your profile, and be part of a supportive community! 🌍
Interested? Apply today & help shape the future of science publishing! 📢
More info: prelights.biologists.com/news/join-th...
September 1, 2025 at 8:59 AM
🚨 New call for preLighters!🚨
Help us highlight the most exciting biological #preprints. Share your insights, build your profile, and be part of a supportive community! 🌍
Interested? Apply today & help shape the future of science publishing! 📢
More info: prelights.biologists.com/news/join-th...
Help us highlight the most exciting biological #preprints. Share your insights, build your profile, and be part of a supportive community! 🌍
Interested? Apply today & help shape the future of science publishing! 📢
More info: prelights.biologists.com/news/join-th...