Kelvin (Zewen) Tuong
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kelvintuong.bsky.social
Kelvin (Zewen) Tuong
@kelvintuong.bsky.social
81 followers 160 following 9 posts
Senior Research Fellow, Computational Immunology, The University of Queensland
https://www.github.com/zktuong/dandelion
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Reposted by Kelvin (Zewen) Tuong
xuehan-lu.bsky.social
Proud to share our review with colleagues across UQFI, IMB, QIMR, AIBN, Child Health Research Centre, and KIRAMS.
We discuss how cell–cell interaction in TME guide precision oncology
🔗https://genomemedicine.biomedcentral.com/articles/10.1186/s13073-025-01518-5
#PrecisionOncology #SpatialOmics
October 13, 2025 at 9:48 AM
Reposted by Kelvin (Zewen) Tuong
samstehbens.bsky.social
Fantastic talk from @kelvintuong.bsky.social at IMB #UQ this morning. Importantly …another scientist who uses #cats in their talk. #CatsOfAcademia #IMB-alumni
July 23, 2025 at 12:18 AM
kelvintuong.bsky.social
dandelionR: Single-cell immune repertoire trajectory analysis in R is out! www.sciencedirect.com/science/arti...

Checkout our package at github.com/tuonglab/dan... and on Bioconductor 3.21 onwards!

Thanks to everyone involved! @thehumanborch.bsky.social
dandelionR: Single-cell immune repertoire trajectory analysis in R
Integration of single-cell RNA-sequencing (scRNA-seq) and adaptive immune receptor (AIR) sequencing (scVDJ-seq) is extremely powerful in studying lymp…
www.sciencedirect.com
July 1, 2025 at 12:19 AM
kelvintuong.bsky.social
Data standards for single‐cell RNA‐sequencing of paediatric cancer - Xu - 2025 - Clinical & Translational Immunology - Wiley Online Library onlinelibrary.wiley.com/doi/10.1002/...
<em>Clinical & Translational Immunology</em> | ASI Journal | Wiley Online Library
Publicly available scRNA-seq data can support new research ideas, especially in resource-limited settings, but the lack of standards complicates data validation and analysis. In this article, we revi....
onlinelibrary.wiley.com
May 23, 2025 at 9:29 PM
kelvintuong.bsky.social
New research out from the Belz lab! Very happy to have played a small role in this amazing work!
May 15, 2025 at 11:19 AM
Reposted by Kelvin (Zewen) Tuong
djhelam1.bsky.social
Glad that the first thing that I share on here is our (@efronhofer.bsky.social , Vasilis Dakos and Oliver Kaltz) work from my PhD thesis at @isemevol.bsky.social on host parasite eco-evolution in spatial networks out now in Evolution Letters @evolletters.bsky.social !

doi.org/10.1093/evle...
Landscape structure as a driver of eco-evolution in host–parasite systems
Abstract. Spatial network structure of biological systems drives ecology and evolution by distributing organisms and their genes. The ubiquitous host–paras
doi.org
April 6, 2025 at 6:54 PM
Reposted by Kelvin (Zewen) Tuong
linterman.bsky.social
Great to have our paper out in @pnas.org showing that lung B cells in ectopic germinal centers undergo affinity maturation.

@smguillaume.bsky.social @wsfoster.bsky.social @sanmarti92.bsky.social @emae-watson.bsky.social Silvia Innocentin, Grant Kennedy & Alice Denton. doi.org/10.1073/pnas...
Lung B cells in ectopic germinal centers undergo affinity maturation | PNAS
The lungs are constantly exposed to the external environment and a myriad of antigenic challenges within the air. Chronic exposure to allergens and...
doi.org
April 3, 2025 at 3:03 AM
Reposted by Kelvin (Zewen) Tuong
labwaggoner.bsky.social
Lung B cells in ectopic germinal centers undergo affinity maturation
www.pnas.org/doi/10.1073/...
@linterman.bsky.social
@smguillaume.bsky.social
@wsfoster.bsky.social
@sanmarti92.bsky.social
@emae-watson.bsky.social
April 3, 2025 at 8:28 PM
kelvintuong.bsky.social
CellPhoneDB v5 is officially published!
nature.com/articles/s41...

Very happy to have played a small role in it by developing some tools to help visualise the complex cell-cell interaction data!

#SingleCell
CellPhoneDB v5: inferring cell–cell communication from single-cell multiomics data - Nature Protocols
CellPhoneDB combines a curated database of receptor–ligand interactions with methods to infer cell–cell communication from single-cell expression data. This protocol update describes an expanded datab...
nature.com
March 31, 2025 at 11:56 PM
Reposted by Kelvin (Zewen) Tuong
benjhogan.bsky.social
We are recruiting a group leader in laboratory research at Peter Mac Cancer Centre in
Melbourne, Australia 🔬🦘💥

Work in a cutting edge research environment in a vibrant world city!

We value research excellence, creativity and diversity.

Join us!

careers.petermac.org/job/MELBOURN...
Group Leader
Group Leader
careers.petermac.org
March 5, 2025 at 8:04 AM
Reposted by Kelvin (Zewen) Tuong
aixbiobot.bsky.social
TEDDY: A Family Of Foundation Models For Understanding Single Cell Biology [new]
Foundation models trained on a large single-cell dataset with biological annotations enhance disease state identification, with improvements scaling with size.
TEDDY: A Family Of Foundation Models For Understanding Single Cell Biology Figure 1 Figure 2 Figure 4
March 6, 2025 at 4:47 AM
kelvintuong.bsky.social
Very happy to share that I got lucky this round and was successful in my #NHMRC Investigator Grant!
February 25, 2025 at 4:08 AM
Reposted by Kelvin (Zewen) Tuong
labwaggoner.bsky.social
Disease diagnostics using machine learning of B cell and T cell receptor sequences @science.org
www.science.org/doi/10.1126/...
@zazius.bsky.social
@anshulkundaje.bsky.social
@scottboydlab.bsky.social
February 20, 2025 at 8:20 PM
Reposted by Kelvin (Zewen) Tuong
shihcheng.bsky.social
B cells are crucial in infection, inflammation & cancer, acting at inflammation sites & forming tissue-resident memory. Impact on therapy & outcomes is profound. #BcellPower PMID:39910240, Nat Rev Immunol 2025, @NatRevImmunol https://doi.org/10.1038/s41577-025-01137-6
February 13, 2025 at 10:10 AM
Reposted by Kelvin (Zewen) Tuong
labwaggoner.bsky.social
NKG7 is a stable marker of cytotoxicity across immune contexts and within the tumor microenvironment
www.biorxiv.org/content/10.1...
@eomesodermin.bsky.social @nsssusanna.bsky.social @rturiello.bsky.social
February 9, 2025 at 9:25 PM
kelvintuong.bsky.social
#single-cell Immune Repertoire Trajectory analysis in R www.biorxiv.org/content/10.1...
dandelionR: Single-cell immune repertoire trajectory analysis in R
Integration of single-cell RNA-sequencing (scRNA-seq) and adaptive immune receptor (AIR) sequencing (scVDJ-seq) is extremely powerful in studying lymphocyte development. A python-based package, Dandel...
www.biorxiv.org
February 8, 2025 at 11:24 AM
Reposted by Kelvin (Zewen) Tuong
petterbrodin.bsky.social
Thanks for highlighting! Great session
payalyokota.bsky.social Payal Yokota @payalyokota.bsky.social · Feb 5
Phenomenal talk by Dr. Petter Brodin about Early life imprinting if human immune system. #KSinnateimmune25 @petterbrodin.bsky.social
February 5, 2025 at 7:45 PM
Reposted by Kelvin (Zewen) Tuong
labwaggoner.bsky.social
Review @natrevimmunol.bsky.social @laurenrodda.bsky.social @georgecelis.bsky.social
B cells in non-lymphoid tissues
www.nature.com/articles/s41...
B cells in non-lymphoid tissues - Nature Reviews Immunology
B cells are major drivers of systemic immunity, but they also act locally in non-lymphoid organs. This Review highlights new insights into mechanisms of tissue B cell function as well as efforts to le...
www.nature.com
February 6, 2025 at 2:03 AM
Reposted by Kelvin (Zewen) Tuong
labwaggoner.bsky.social
Temporal profiling of human lymphoid tissues reveals coordinated defense against SARS-CoV-2 challenge
@natimmunol.bsky.social
www.nature.com/articles/s41...
www.nature.com/articles/s41...
January 31, 2025 at 11:13 PM
Reposted by Kelvin (Zewen) Tuong
labwaggoner.bsky.social
Mapping pre-existing immune landscapes to predict vaccine responses
doi.org/10.1101/2025...
January 24, 2025 at 4:12 PM
Reposted by Kelvin (Zewen) Tuong
jem.org
Our new #immunology collection highlights recent studies on barrier immunity, microbiota, molecular immunology, neuroimmunology, and stem cells and regeneration. Explore new research from JEM to accompany the @midwinter-immun.bsky.social Conference! 📚👉 https://buff.ly/4geAP6W
January 23, 2025 at 3:15 PM
Reposted by Kelvin (Zewen) Tuong
stephenturner.us
Mapping cells through time and space with moscot https://www.nature.com/articles/s41586-024-08453-2 🧬🖥️🧪 https://github.com/theislab/moscot
January 23, 2025 at 9:00 PM
Reposted by Kelvin (Zewen) Tuong
labwaggoner.bsky.social
A gut protozoan plays a key role in shaping the immunological steady state of the lung
@cellcellpress.bsky.social
Preview by @benjmarsland.bsky.social
www.cell.com/cell/fulltex...
Manuscript from @theonlylabever.bsky.social
www.cell.com/cell/fulltex...
January 23, 2025 at 7:17 PM
Reposted by Kelvin (Zewen) Tuong
reinacampos.bsky.social
It turns out the immune system is playing 4D chess while we thought it was just playing checkers. Using #spatialtranscriptomics from @10xgenomics.bsky.social and @vizgen.bsky.social we were able to peek into the secret lives of tissue resident T cells in the gut as they form after infection 1/n
Tissue-resident memory CD8 T cell diversity is spatiotemporally imprinted - Nature
Profiling of the location and transcriptome of tissue-resident memory&nbsp;CD8 T cell formation at single-transcript resolution&nbsp;finds regionalized signalling as the basis of immune diversity in t...
www.nature.com
January 22, 2025 at 5:37 PM
Reposted by Kelvin (Zewen) Tuong
labwaggoner.bsky.social
seq2PRINT framework applied to scATAT-seq human bone marrow data reveals organization of Cis-regulatory elements across differentiation and ageing
@nature.com
www.nature.com/articles/s41...
January 22, 2025 at 7:10 PM