Kalika Prasad
kalikaprasad.bsky.social
Kalika Prasad
@kalikaprasad.bsky.social
Professor, Indian Institute of Science Education and Research (IISER), Pune

http://thelabofregeneration.in/Kalika_Prasad/index.html
Pinned
Our new paper is out!
1/14 How does an organ rebuild its shape after injury? It's not just about making new cells, but aligning them in the right direction — like bricks shaping a structure. We show that it's all driven by Cell Geometry!

www.cell.com/current-biol...
Wound repair in plants guided by cell geometry
Mathew et al. show that growth conflicts reshape cells after injury, forming rhomboidal geometries that trigger diagonal divisions. This reorients cell files to restore tapered morphology. A two-step ...
www.cell.com
Reposted by Kalika Prasad
By combining molecular genetics with cell-ablation experiments, we found that vascular cambium stem cells and xylem-identity cells form an interchangeable unit, a stem cell niche. Meticulous work by @xixizhang9001.bsky.social, Ondrej Smetana, Jing Zhang & Xiaoyu Wang 1/x www.pnas.org/doi/10.1073/...
Auxin transport positions stem cells in the vascular cambium during normal development and regeneration | PNAS
The vascular cambium contains bifacial stem cells producing secondary phloem in one and secondary xylem to the opposite direction. In Arabidopsis r...
www.pnas.org
November 14, 2025 at 9:30 AM
Reposted by Kalika Prasad
Here’s an example showing how you can reproduce a classic Scheres-type RAM stem-cell ablation experiment using Bax.
November 14, 2025 at 10:03 AM
Very nice work from @apmahonen.bsky.social
lab.. when vascular cambial stem cells are lost, neighbouring xylem cells, divide to replace them Auxin transport drive this remarkable positioning of stem cells in vascular cambium during development and regeneration.

www.pnas.org/doi/abs/10.1...
November 14, 2025 at 8:00 AM
Reposted by Kalika Prasad
How are the intervals of periodic pattern formation regulated during plant morphogenesis? Our latest study now published in @natcomms.nature.com proposes that the mutual inhibition between EPFL2 and auxin modulates the periodicity🌿

www.nature.com/articles/s41...
Mutual inhibition between EPFL2 and auxin extends the intervals of periodic leaf morphogenesis - Nature Communications
Plant development is characterized by periodic morphogenesis, yet regulatory mechanisms underlying the periodicity remain unknown. Tameshige et al. reveal that bistable cellular status modulates the s...
www.nature.com
November 13, 2025 at 10:52 AM
Reposted by Kalika Prasad
What a glorious day--waking up to see this lovely preprint that does it all--a comprehensive scRNAseq atlas of leaf development, hints at the txn of new cell types, and great hypotheses about how GRNs may differ among related TFs

(and in other news, some hope for American Democracy)
1/ Preprint alert:

🌾 The developing leaf of the wild grass Brachypodium distachyon at single-cell resolution

👉 doi.org/10.1101/2025...
A 70k-cell single-cell RNA-seq atlas of the developing grass leaf—from the shoot meristem to mature leaf tissues. @cerealcell.bsky.social @lbmountain.bsky.social
November 5, 2025 at 2:16 PM
Reposted by Kalika Prasad
Excited to announce our paper is out! Congrats to @pauformosa.bsky.social, @gweissbart.bsky.social, Frances Clark, and Xihang Wang on this fun and beautiful story. We answered a question about the randomness of giant cell spacing that I have had for at least 15 years.
How are #plant #leaf epidermal cells patterned? @roederlab.bsky.social &co show that the pathway controlling #GiantCell formation in #sepals also controls cell size in #Arabidopsis leaves, via cell-autonomous & stochastic specification @plosbiology.org 🧪 plos.io/491F1qQ
November 6, 2025 at 2:35 AM
Reposted by Kalika Prasad
Our work on mapping the dynamics of phospholipids during lateral root formation is now published in @jxbotany.bsky.social We show that PI(4,5)P₂ plays a key role: targeted reduction in pericycle promotes LR development.
academic.oup.com/jxb/advance-...
November 4, 2025 at 9:19 AM
Reposted by Kalika Prasad
Our lab studies how animals regenerate their body, e.g. how crustaceans regenerate broken legs. One of our aims is to understand if regeneration re-uses the gene networks that built the legs in the first place. Arthur Monternier, an artist in our team, captured the question in this cartoon.
October 27, 2025 at 3:25 PM
Reposted by Kalika Prasad
Join us in one of the most supportive and collaborative departments, led by an equally supportive chair!
Please repost!!:
We are searching for new AI-Bio faculty at Duke to be part of a new Discovery AI center. Looking for faculty who focus on pushing boundaries in ML model development in a highly interactive environment. DEADLINE for applications- Nov 1st!!

www.nature.com/naturecareer...
Tenure-Track Assistant Professor Position –AI/ML for Cell Biology - Durham, North Carolina (US) job with Duke University School of Medicine | 12844591
Tenure-Track Assistant Professor Position –AI/ML for Cell Biology
www.nature.com
October 25, 2025 at 6:25 PM
Reposted by Kalika Prasad
What are these?

You are looking at embryos of a sea squirt. Each of the 'soap bubbles' is a living cell, about a fourtieth of a millimetre in size. The outlines of the cells are visible thanks to fluorescent markers identified by Hitoyoshi Yasuo @hitoyas.bsky.social

see doi.org/10.1101/2024... 🧵
October 26, 2025 at 8:55 AM
Reposted by Kalika Prasad
The “Art of Longevity” — is it by any chance left-handed DNA?
October 26, 2025 at 11:46 AM
Reposted by Kalika Prasad
These are embryos of a jellyfish, made up of cells that are about a fiftieth of a millimetre in size. Their outlines are visible thanks to fluorescent markers identified by Sarah Asaf and @clytia-vlfr.bsky.social

see doi.org/10.1101/2024...

🧵
October 26, 2025 at 2:12 PM
Reposted by Kalika Prasad
Understanding #microtubule dynamics: The synergy of technology, theory, and experiment. New Perspective from Richard McIntosh @colorado.edu: rupress.org/jcb/article/...

#Cytoskeleton #Biophysics #Microtubules
October 22, 2025 at 8:15 PM
Reposted by Kalika Prasad
Nice!

How do your conclusions regarding paralog expression divergence compare to the ones from the recent Solanum paralog paper?

www.nature.com/articles/s41...
Solanum pan-genetics reveals paralogues as contingencies in crop engineering - Nature
Gene duplication and subsequent paralogue diversification are major obstacles to genotype-to-phenotype predictability.
www.nature.com
October 18, 2025 at 9:03 AM
Reposted by Kalika Prasad
Latest from ours: www.cell.com/cell-reports...

This is two stories in one: a case study/cautionary tale on developing genetic tools in new organisms, and the first hint at a gene regulatory network for choanoflagellate multicellular development (which turn out to involve a Hippo/YAP/ECM loop!) A 🧵
October 5, 2025 at 10:35 AM
Reposted by Kalika Prasad
Webinar on Quantitative Approaches to Cellular Aspects of Plant Ion Homeostasis on Thursday October 16th: 3-4pm BST
www.cambridge.org/core/journal...
October 1, 2025 at 10:34 AM
Reposted by Kalika Prasad
It's official! We are moving to Stowers!
Very exciting opportunity to expand our studies of insect-plant interactions. We have many opportunities available in biochemistry, development, behavior, genetics, evolution, genomics, AI, and even pest control. Interested in any of these things? Reach out!
NEWS🎉 We’re excited to announce @hhmijanelia.bsky.social Investigator David Stern will join the Institute from Janelia Research Campus. His lab studies how aphids transform plants at the genetic level, uncovering secrets of #evolution & new strategies for pest control. @hhmi.org bit.ly/4np96Fb
Stowers Institute recruits renowned developmental and evolutionary…
David Stern, Ph.D., brings groundbreaking research on insect–plant interactions for next-generation pest control to the Institute.
bit.ly
September 30, 2025 at 8:15 PM
Reposted by Kalika Prasad
How do plants regenerate after wounding? Our new work shows that HSFA1 transcription factors are among the earliest wound-activated regulators of cellular reprogramming in plants!
Wounding activates the HSFA1 transcription factors to promote cellular reprogramming in Arabidopsis https://www.biorxiv.org/content/10.1101/2025.09.29.679115v1
October 1, 2025 at 6:26 AM
Reposted by Kalika Prasad
I really like the series of profiles @newphyt.bsky.social is currently publishing.

The new one is on @stanfordstomata.bsky.social:

nph.onlinelibrary.wiley.com/doi/10.1111/...

#PlantScience #PlantLuminaries
September 29, 2025 at 8:27 AM
Humbled to be a part of Indian Science Academies, @ IAScBng, @nasi_academy, and Now @insa_academy
Such moments remind me how fortunate I am to work with talented lab members (past and present), collaborators, colleagues and mentors all along. Thank you for this opportunity 🙏
September 29, 2025 at 8:39 AM
Reposted by Kalika Prasad
I'm looking forward to chairing this webinar. Congrats to the Dissemination of Arabidopsis Knowledge awardees!
RSVP to join the Dec 16th webinar and hear from the 2025 Arabidopsis Community Dissemination of Arabidopsis Knowledge Awardees! bit.ly/naascawards
@bar-plantbio.bsky.social
@natanellae.bsky.social
September 23, 2025 at 1:44 AM
Reposted by Kalika Prasad
Congrats to the Arabidopsis Lifetime Achievement Awardees!
Please share & RSVP to join the November 25th webinar!
Hear from the 2025 Philip N. Benfey Arabidopsis Community Lifetime Achievement Awardees! bit.ly/naascawards
@plantevolution.bsky.social
September 23, 2025 at 1:45 AM
Reposted by Kalika Prasad
Development does not happen in isolation! Material properties, geometry, stiffness, fluid flows...can all steer how development unfolds. If you’re exploring these kinds of questions, we’d love to see your work @dev-journal.bsky.social
More info below ⬇️
📢Call for papers. Submit your latest research to our upcoming special issue – The Extracellular Environment in Development, Regeneration and Stem Cells

Guest Editors: Alex Hughes and Rashmi Priya

📅 Deadline: 1 March 2026

journals.biologists.com/dev/pages/ex...

#DevBio
September 19, 2025 at 9:48 AM
Reposted by Kalika Prasad
If you are leading a team, you have a responsibility to be a “pragmatic optimist”. Otherwise, you risk being disloyal to the amazing young people you work with. #FridayThoughts
a cartoon of two girls with the words " it 's all about which way you look "
ALT: a cartoon of two girls with the words " it 's all about which way you look "
media.tenor.com
September 19, 2025 at 6:09 AM