Aaron Vogan
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fungage-lab.bsky.social
Aaron Vogan
@fungage-lab.bsky.social
Researches fungal evolution/genetics/genomics. Associate professor at the University of Uppsala, investigating accessory genomes and giant TEs in Fungi.
Pinned
We did it! We caught Starship #transposons moving between #fungal species in the lab, including between species separated by ~100my. We think Starships are a mediator of HGT in fungi, akin to conjugative elements in bacteria. Check out the preprint. www.biorxiv.org/content/10.1...
We're looking for a PhD student! If you're interested in #fungal #genomics & #TEs, meiotic drive, or pathogens, please consider applying. The project is about toxin/antidote genes in the human fungal pathogen A. fumigatus. uu.varbi.com/en/what:job/...
November 19, 2025 at 9:20 AM
Reposted by Aaron Vogan
Our latest pre-print on TE-mediated tandem duplication of the ToxB effector is now online...still a puzzle for us but we think it is in a Helitron! Together with amazing collaborators, Reem Aboukhaddour and Ryan Gourlie #TE #fungi
www.biorxiv.org/content/10.1...
The virulence gene ToxB is both amplified and disrupted by transposons in the wheat pathogen Pyrenophora tritici-repentis
### Competing Interest Statement The authors have declared no competing interest. Agriculture and Agri-Food Canada, https://ror.org/051dzs374 Alberta Grain Saskatchewan Wheat Development Commissio...
www.biorxiv.org
November 18, 2025 at 4:22 PM
Reposted by Aaron Vogan
We are looking for a PhD student to work on an exciting plastid endosymbiosis in microbial eukaryotes. This position involves sampling, exciting microscopy such as CARDFISH, ExM and FIBSEM, single-cell transcriptomics and more. #protistsonsky 1/2
November 12, 2025 at 9:50 AM
Reposted by Aaron Vogan
Exciting news! I have two positions open in my lab at the UoManchester: one PDRA and one Research Tech.
Join our team to study evolutionary mycology and help us understand antifungal resistance in fungal pathogens. A fantastic opportunity to join the brilliant Manchester Fungal Infection Group!
November 5, 2025 at 3:35 PM
Reposted by Aaron Vogan
New research in #GENETICS suggests accessory chromosomes in #fungi #fusarium might be maintained because of Spok genes and not because of their beneficial effects on virulence.

Learn more about this work from @fungage-lab.bsky.social and colleagues: buff.ly/R2CRa3O
November 4, 2025 at 9:02 PM
Reposted by Aaron Vogan
We are inviting applications for a postdoctoral researcher to support the Laboratory of Fungal Ecology and Evolution, and join our project studying obligatory multitrophic interactions. jobs.bc.cas.cz/en/detail/266 #LFEE #LuminaQuaeruntur #postdoc #hiring
October 31, 2025 at 5:28 AM
Reposted by Aaron Vogan
1/ Ever needed to annotate TEs in a fungal genome, but didn't know where to start?

We have released #MycoMobilome, a community-focused non-redundant database of transposable element consensus sequences for the fungal kingdom, constructed from >4,000 fungal genomes!

www.biorxiv.org/content/10.1...
October 29, 2025 at 9:02 AM
Reposted by Aaron Vogan
@prczhaoyansong.bsky.social’s deep dive into the dark matter of compost communities is now out 🎉 Genomic islands hijack jumbo phages—whose capsids enable transfer of large tracts of DNA—shedding new light on the scale & scope of phage-mediated gene flow 😎

www.pnas.org/doi/10.1073/...
Jumbo phage–mediated transduction of genomic islands | PNAS
Bacteria acquire new genes by horizontal gene transfer, typically mediated by mobile genetic elements (MGEs). While plasmids, bacteriophages, and c...
www.pnas.org
October 28, 2025 at 6:36 PM
Reposted by Aaron Vogan
📣 I’m excited to share two open positions in my lab @leibniz-hki.de. For this interdisciplinary project with @luziagyr.bsky.social, I’m seeking (1) an enthusiastic PhD student interested in fungal natural product research and genetic engineering, as well as (2) a technical assistant 👇🏻
October 21, 2025 at 2:48 PM
Reposted by Aaron Vogan
Including a position in my group to work on Evolutionary Genomics of Fungal pathogens
📢 EvoMG-DN PhD applications are now open!
Join our EU-funded MSCA network and explore evolution, ageing, and disease.
👉 www.evomg-dn.eu

📅 Apply by 30 November 2025

#PhD #DoctoralTraining #MSCA #HorizonEurope #Genomics #EvolutionaryBiology #BiomedicalResearch#EarlyCareerResearchers
October 10, 2025 at 4:00 PM
Reposted by Aaron Vogan
Want to understand how entire fungal chromosomes can be horizontally transferred?
Join us to unravel the mechanism/consequences of horizontal chromosome transfer in a fungal pathogen as part of an ERC-funded project. Postdoc/PhD positions available.
fungal-evolutionary-genetics.de/open-positio...
Open Positions
ERC-funded project on the mechanism of horizontal transfer of entire fungal chromosomes PhD PostDoc
fungal-evolutionary-genetics.de
October 13, 2025 at 9:39 AM
Reposted by Aaron Vogan
New opportunity to undertake a PhD in my group ⁦‪at the John Innes Centre - if you’re interested in plant immunity and evolution check out the link!
Understanding Host Compatibility in the Marchantia-Phytophthora System (CARELLA_J26DTP) | Doctoral Training Partnership
The fossil record demonstrates that filamentous microbes invaded ancient plant cells with intracellular hyphal structures over 450 million years ago. To this day, a rich diversity of extant land plant...
biodtp.norwichresearchpark.ac.uk
October 12, 2025 at 5:30 PM
Reposted by Aaron Vogan
My department at UC Davis is hiring a mycologist, broadly interpreted. Please repost, share, and consider applying. recruit.ucdavis.edu/JPF07339
Assistant Professor of Plant Pathology
University of California, Davis is hiring. Apply now!
recruit.ucdavis.edu
September 22, 2025 at 5:36 PM
Excited to see the final version of our paper on toxin/antidote genes and accessory chromosomes in Fusarium published! Now with new and improved figures! We think that many #fungal ACs might be maintained not because of benefits to virulence, but because of Spok genes. doi.org/10.1093/gene...
September 22, 2025 at 8:51 AM
Reposted by Aaron Vogan
I’m super happy to present the first discoveries of the RIKEN-Cambridge Joint Crop Symbiosis Research Team, based in Japan 🇯🇵

doi.org/10.1101/2025...

A thread 👇
Reductive evolution of the DNA replication machinery in endosymbiotic fungi
The molecular machinery for replicating and repairing DNA accurately is critically important for life and highly conserved across the Tree of Life. Here we show that two major lineages of fungi, Glome...
doi.org
September 3, 2025 at 3:21 PM
Reposted by Aaron Vogan
An opportunity of a lifetime for budding lichenologists. The National Trust and the Royal Botanics, Edinburgh are offering a PAID lichen traineeship in #Scotland! The work programme looks fascinating and a great opportunity to develop skills. Deadline: 3/10/2025. www.asva.co.uk/jobs/trainee...
September 5, 2025 at 1:32 PM
Reposted by Aaron Vogan
We have several open positions in my group, funded from the ERC Grant on the Early Sequestered Germline of Fungi. We search broadly for applicants at both PhD and master-level, with a dedicated interest in fungal evolutionary biology. Please forward and RT!
Find the positions here: su.varbi.com
Lediga jobb vid Stockholms universitet
Jobb
su.varbi.com
September 7, 2025 at 1:13 PM
Reposted by Aaron Vogan
Delighted that our work on the Sanctuary Starship #transposon is now published! A big thanks to all co-authors, especially to the ever-amazing @mcdonaldmeganc.bsky.social for her mentorship!

doi.org/10.1128/mbio...
Sanctuary: a Starship transposon facilitating the movement of the virulence factor ToxA in fungal wheat pathogens | mBio
The work presented here expands our understanding of a novel group of mobile genetic elements called Starships that facilitate the horizontal exchange of numerous genes between fungal pathogens. Our a...
doi.org
September 6, 2025 at 1:11 PM
Reposted by Aaron Vogan
Thrilled and honoured to have received an #ERCStG from @erc.europa.eu for my project MobiChrom on horizontal chromosome transfer in fungal pathogens. We’ll explore key questions: What is the mechanism? How is specificity regulated? Are these selfish elements? Exciting times ahead - job ads soon!
📣 The ERC Starting Grant call results are out!

Find out which early-career researchers will receive funding this year, what they will be investigating, where they will be based... plus lots of other #ERCStG facts & figures for 2025!

➡️ buff.ly/IsafuFh

#FrontierResearch 🇪🇺#EUfunded #HorizonEurope
September 5, 2025 at 6:51 AM
Reposted by Aaron Vogan
Check out our new paper on adopting a trait-based framework for protist diversity! We make the case for a unified protist trait database, how to build it, and how it could transform research on protist ecology and evolution.
#protistsonsky
Hello there 🦋
Happy to share our piece "Towards a trait-based framework for protist ecology and evolution" in @cp-trendsmicrobiol.bsky.social

Let's build a unified trait 📏 database to unlock transformative insights into protist 🔬 ecology 🌍 and evolution ⏳

▶️ doi.org/10.1016/j.ti...

#protistsonsky
September 3, 2025 at 8:47 AM
Reposted by Aaron Vogan
*Postdoc in Evolutionary genomics at Stockholm University*
We are recruiting a postdoc for a large interdisciplinary project to investigate evolutionary drivers and genomic consequences of pollen evolution in response to pollination mode shifts in flowering plants. 1/5

su.varbi.com/what:job/job...
September 2, 2025 at 2:20 PM
Reposted by Aaron Vogan
Assistant/ Associate Professor of Mycology at UGA - Go be part of a Legendary Fungal Group fungi.franklinresearch.uga.edu and dept of plant pathology plantpath.caes.uga.edu www.ugajobsearch.com/postings/445...
Assistant or Associate Professor - Fungal Biology/Mycology
The Department of Plant Pathology in the College of Agricultural and Environmental Sciences (CAES) at the University of Georgia is recruiting for the position of Assistant or Associate Professor in Fu...
www.ugajobsearch.com
August 21, 2025 at 7:51 PM
Reposted by Aaron Vogan
📣🍄🦇🍄🦇🍄📣
I am looking for a postdoctoral researcher for my lab in Ceske Budejovice, Czechia. We study biodiversity monitoring, ecology, conservation, and microbiology. Some of our work deals with bats, most with fungi! Email at danny dot haelewaters at gmail dot com if interested. #TeamLaboul #newPI
August 14, 2025 at 8:40 PM
Reposted by Aaron Vogan
It started as a master thesis project by Markus Hiltunen, and ended up in this publication in Science. What a fun project to work on! Thanks Markus - and all other coauthors, too, for a great team work! www.science.org/doi/10.1126/...
Early germline sequestration in a basidiomycete fungus
In sexual organisms, inheritance of new mutations is highly dependent on the timing of germline definition. Here, we used the fairy ring–forming fungus Marasmius oreades to challenge the general assum...
www.science.org
August 14, 2025 at 7:55 PM