Emily Kolenbrander Ho
banner
emkolen.bsky.social
Emily Kolenbrander Ho
@emkolen.bsky.social
New asst prof at Claremont McKenna College | postdoc at Princeton, PhD from Stanford | devbio, signaling, and undergrad education
Pinned
Have you ever wanted to *see* receptor activity in embryos? If so, our new preprint is for you! In it, we showcase a new live-cell biosensor for visualizing receptor tyrosine kinase activity in living embryos – pYtags!

www.biorxiv.org/content/10.1...
Reposted by Emily Kolenbrander Ho
Thrilled to share our work using live imaging to understand how Epiblast (future embryo proper) and Primitive Endoderm (future extraembryonic tissues) cell fates segregate in the preimplantation mouse embryo. Gargantuan effort led by amazing @rpkimyip.bsky.social, David Denberg and Denis Faerberg!
August 2, 2025 at 7:31 PM
pYtags - our in vivo biosensors for receptor tyrosine kinases - in all their beauty on the cover of Cell Reports! Read more here: www.cell.com/cell-reports...
July 22, 2025 at 8:52 PM
Excited to share that our work building in vivo biosensors for receptor tyrosine kinases (pYtags!) is now out www.cell.com/cell-reports...
July 1, 2025 at 1:58 PM
Reposted by Emily Kolenbrander Ho
Excited to share the bulk of my postdocotoral work from the @ditalialab.bsky.social on how cells interpret dynamic morphogen signaling during development! Many thanks to our collaborators & coauthors @shelbyflies.bsky.social, Massimo Vergassola, Jacqueline Janssen, and Anna Chao.
June 10, 2025 at 3:58 PM
Reposted by Emily Kolenbrander Ho
Website and registration will open soon for the West Coast SDB meeting, Aug 14–17 at Cal-Poly SLO! Abstract deadline for talks is July 7. Final deadline for abstracts (posters) and registration is July 31. We will have prizes for best undergrad, grad, and post doc presentations! #wcsdb2025 1/4
May 29, 2025 at 11:19 PM
Reposted by Emily Kolenbrander Ho
I'd like to share a little bit of happy lab news in these chaotic times: a new preprint, driven by the brilliant Qinhao Cao!
www.biorxiv.org/content/10.1...
We address a big challenge in synbio: If you give me a protein "X", how can I give you a version of X whose activity is controlled by a kinase?
April 21, 2025 at 4:07 PM
Reposted by Emily Kolenbrander Ho
Happy to share a new preprint from my lab! We characterize the on/off kinetics, light dosage-dependence, and more for a suite of optogenetic signaling activators in zebrafish embryos 💡 www.biorxiv.org/content/10.1...
An optogenetic toolkit for robust activation of FGF, BMP, and Nodal signaling in zebrafish
Cell signaling regulates a wide range of biological processes including development, homeostasis, and disease. Accessible technologies to precisely manipulate signaling have important applications in ...
www.biorxiv.org
April 21, 2025 at 1:47 PM
Reposted by Emily Kolenbrander Ho
New(ish) preprint! 📰What whole-cell patterns emerge from the arrangement, morphologies, and interactions of organelles in the 3D space of the cell? What would we see if we could gather ALL the whole-cell reconstruction data that's out there in one place? www.biorxiv.org/content/10.1...
🧵 1/11
A scoping study of the whole-cell imaging literature: a foundational corpus, potential for mesoscale data synthesis, and implications for standardization of an emerging field
The level of cellular organization bridging the mesoscale and whole-cell scale is coming into focus as a new frontier in cell biology. Great progress has been made in unraveling the complex physical a...
www.biorxiv.org
April 19, 2025 at 3:58 PM
Reposted by Emily Kolenbrander Ho
I'm so happy to report that our preprint on light-induced collective cell migration has now been published in Cell Systems! This project was a lot of fun and will be the basis for a lot of our ongoing & future work.
Large-scale control over collective cell migration using light-activated epidermal growth factor receptors
Programmable control over tissue movement is a fundamental challenge for tissue engineering and wound healing. Suh, Thornton, et al. discovered that a light-controlled EGF receptor controls long-range...
www.cell.com
March 25, 2025 at 6:29 PM
Reposted by Emily Kolenbrander Ho
How many cells do you need to establish PCP? The magic number is 3! Beautiful work by Lena Basta in Danelle Devenport's lab. Happy to have contributed. www.science.org/doi/10.1126/...
Epithelial polarization by the planar cell polarity complex is exclusively non–cell autonomous
For cells to polarize collectively along a tissue plane, asymmetrically localized planar cell polarity (PCP) complexes must form intercellular contacts between neighboring cells. Yet, it is unknown wh...
www.science.org
March 22, 2025 at 1:47 AM
Reposted by Emily Kolenbrander Ho
Developmental systems have regions that deform actively or passively from their active neighbors. We use a ring of tissue as a model to investigate this boundary-driven morphogenesis in its biological context, learning something about gastrulation and possibly blastopore geometries in the process!
New #preprint: "A model for boundary-driven tissue morphogenesis" arxiv.org/abs/2503.03688.

A great collaboration with @danielalber.bsky.social @zhaoshh.bsky.social, Alexandre Jacinto, Eric Wieschaus, Stas Shvartsman.

@flatironinstitute.org @mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social
March 6, 2025 at 2:12 PM
Reposted by Emily Kolenbrander Ho
A duo of preprints on the dynamics of the first cell fate decision in mouse by Madeleine Chalifoux (first grad student in the lab!) and Maria Avdeeva (Flatiron).

We use quantitative live imaging of key cell fate determinants to follow the segregation of inner cell mass and trophectoderm lineages.
March 5, 2025 at 2:54 AM
Reposted by Emily Kolenbrander Ho
The Society for Developmental Biology has released a statement on the Unprecedented Disruptions to Biomedical Research in the United States.
January 29, 2025 at 10:08 PM
Have you ever wanted to *see* receptor activity in embryos? If so, our new preprint is for you! In it, we showcase a new live-cell biosensor for visualizing receptor tyrosine kinase activity in living embryos – pYtags!

www.biorxiv.org/content/10.1...
January 7, 2025 at 5:46 PM
Reposted by Emily Kolenbrander Ho
New preprint from Alex Long, Tim Stearns, Jessica Feldman, Lillian Fritz-Laylin and colleagues! Chytrids are neat, understudied and ecologically important as frog pathogens. Shown here, they also remodel their centrioles during cilia disassembly prior to mitosis:
www.biorxiv.org/content/10.1...
Dynamic remodeling of centrioles and the microtubule cytoskeleton in the lifecycle of chytrid fungi
Cells reorganize in space and time to move and divide - complex behaviors driven by their internal cytoskeleton. While we have substantial knowledge of the molecular parts and rules of cytoskeletal as...
www.biorxiv.org
January 6, 2025 at 12:20 AM
Reposted by Emily Kolenbrander Ho
Wishing you all the best for 2025 ! ...and a little late thread on our recent preprint studying how tissue growth is affected by mild induction of apoptosis. Drosophila wing disc readjusts global tissue size by modulating dev. time without local proliferation boost.
www.biorxiv.org/content/10.1...
Developmental delay ensures global tissue size robustness upon local induction of apoptosis
The capacity of our tissues to cope with external and internal stress relies on the tight coupling between cell proliferation, cell growth and cell death. This coupling is assumed to be based on compe...
www.biorxiv.org
January 5, 2025 at 10:07 PM
Can’t wait for all the amazing things to come from the Ramm lab!
Thrilled to announce that in January I will be opening my own lab at the Friedrich Miescher Laboratory @mpi-bio-fml.bsky.social of the Max Planck Society @maxplanck.de in lovely Tübingen, Germany!
December 23, 2024 at 6:07 PM
Reposted by Emily Kolenbrander Ho
Thrilled to announce that in January I will be opening my own lab at the Friedrich Miescher Laboratory @mpi-bio-fml.bsky.social of the Max Planck Society @maxplanck.de in lovely Tübingen, Germany!
December 22, 2024 at 10:41 PM