Daniel Alber
@danielalber.bsky.social
Postdoc, Hughes Lab @ UPenn | PhD, Shvartsman Lab @ Princeton
Pinned
Daniel Alber
@danielalber.bsky.social
· Sep 18
A ring of cells deforms into a triangular keyhole in just 15 minutes. Meet the hindgut, a model for boundary-driven morphogenesis!
Out now in @pnas.org at doi.org/10.1073/pnas... with @zhaoshh.bsky.social, Alex Jacinto, Eric Wieschaus, Stas Shvartsman, @lepuslapis.bsky.social (1/8)
Out now in @pnas.org at doi.org/10.1073/pnas... with @zhaoshh.bsky.social, Alex Jacinto, Eric Wieschaus, Stas Shvartsman, @lepuslapis.bsky.social (1/8)
Reposted by Daniel Alber
See this? This = implanting mouse embryo. Usually this happens inside its mother and is invisible to us, but we can actually watch implantation ex vivo with the hope of understanding why implantation goes awry in embryos of older women. A 🧵...
October 1, 2025 at 6:21 PM
See this? This = implanting mouse embryo. Usually this happens inside its mother and is invisible to us, but we can actually watch implantation ex vivo with the hope of understanding why implantation goes awry in embryos of older women. A 🧵...
Reposted by Daniel Alber
How do cells navigate up gradients of adhesive proteins?
🤔
Termed "Haptotaxis", this effect is ubiquitous in cell migration, but it's mechanism was poorly understood
We show that passive friction directs cells & explains complex trajectories on gradients
👉 www.nature.com/articles/s41...
🤔
Termed "Haptotaxis", this effect is ubiquitous in cell migration, but it's mechanism was poorly understood
We show that passive friction directs cells & explains complex trajectories on gradients
👉 www.nature.com/articles/s41...
September 27, 2025 at 8:48 AM
How do cells navigate up gradients of adhesive proteins?
🤔
Termed "Haptotaxis", this effect is ubiquitous in cell migration, but it's mechanism was poorly understood
We show that passive friction directs cells & explains complex trajectories on gradients
👉 www.nature.com/articles/s41...
🤔
Termed "Haptotaxis", this effect is ubiquitous in cell migration, but it's mechanism was poorly understood
We show that passive friction directs cells & explains complex trajectories on gradients
👉 www.nature.com/articles/s41...
Reposted by Daniel Alber
🧵1/14 Preprint thread! Can we predict a cell’s fate based on its dynamics? 🔮 Our new study unveils a framework for watching development unfold in real-time, revealing how a cell's shape and movement encode info about its future fate. 🔬📄 Preprint: tinyurl.com/4shf8v4x
September 22, 2025 at 9:37 AM
🧵1/14 Preprint thread! Can we predict a cell’s fate based on its dynamics? 🔮 Our new study unveils a framework for watching development unfold in real-time, revealing how a cell's shape and movement encode info about its future fate. 🔬📄 Preprint: tinyurl.com/4shf8v4x
Reposted by Daniel Alber
Peer pressure shapes the gut: latest publication in @pnas.org by @lepuslapis.bsky.social, @zhaoshh.bsky.social from @mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social with colleagues from @flatironinstitute.org and Princeton University. www.mpi-cbg.de/news-outreac...
Peer pressure shapes the gut
International research team develops mechanical model to explain the shaping of the fruit fly hindgut by forces from neighbouring tissues
www.mpi-cbg.de
September 19, 2025 at 10:29 AM
Peer pressure shapes the gut: latest publication in @pnas.org by @lepuslapis.bsky.social, @zhaoshh.bsky.social from @mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social with colleagues from @flatironinstitute.org and Princeton University. www.mpi-cbg.de/news-outreac...
Reposted by Daniel Alber
Now #published @pnas.org: "A model for boundary-driven tissue morphogenesis", a great #biophysics #devbio collaboration led by @danielalber.bsky.social @zhaoshh.bsky.social:
doi.org/10.1073/pnas.2505160122
@mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social @flatironinstitute.org
doi.org/10.1073/pnas.2505160122
@mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social @flatironinstitute.org
New #preprint: "A model for boundary-driven tissue morphogenesis" arxiv.org/abs/2503.03688.
A great collaboration with @danielalber.bsky.social @zhaoshh.bsky.social, Alexandre Jacinto, Eric Wieschaus, Stas Shvartsman.
@flatironinstitute.org @mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social
A great collaboration with @danielalber.bsky.social @zhaoshh.bsky.social, Alexandre Jacinto, Eric Wieschaus, Stas Shvartsman.
@flatironinstitute.org @mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social
September 19, 2025 at 7:52 AM
Now #published @pnas.org: "A model for boundary-driven tissue morphogenesis", a great #biophysics #devbio collaboration led by @danielalber.bsky.social @zhaoshh.bsky.social:
doi.org/10.1073/pnas.2505160122
@mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social @flatironinstitute.org
doi.org/10.1073/pnas.2505160122
@mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social @flatironinstitute.org
Reposted by Daniel Alber
📣 New preprint: Mechanochemical feedback, tissue geometry & rigid-body dynamics initiate rotational migration in Drosophila via spontaneous chiral symmetry breaking. A mechanism generalizable to closed epithelia.
@sreejithsanthosh.bsky.social
biorxiv.org/content/10.1...
@sreejithsanthosh.bsky.social
biorxiv.org/content/10.1...
September 19, 2025 at 6:25 PM
📣 New preprint: Mechanochemical feedback, tissue geometry & rigid-body dynamics initiate rotational migration in Drosophila via spontaneous chiral symmetry breaking. A mechanism generalizable to closed epithelia.
@sreejithsanthosh.bsky.social
biorxiv.org/content/10.1...
@sreejithsanthosh.bsky.social
biorxiv.org/content/10.1...
A ring of cells deforms into a triangular keyhole in just 15 minutes. Meet the hindgut, a model for boundary-driven morphogenesis!
Out now in @pnas.org at doi.org/10.1073/pnas... with @zhaoshh.bsky.social, Alex Jacinto, Eric Wieschaus, Stas Shvartsman, @lepuslapis.bsky.social (1/8)
Out now in @pnas.org at doi.org/10.1073/pnas... with @zhaoshh.bsky.social, Alex Jacinto, Eric Wieschaus, Stas Shvartsman, @lepuslapis.bsky.social (1/8)
September 18, 2025 at 8:32 PM
A ring of cells deforms into a triangular keyhole in just 15 minutes. Meet the hindgut, a model for boundary-driven morphogenesis!
Out now in @pnas.org at doi.org/10.1073/pnas... with @zhaoshh.bsky.social, Alex Jacinto, Eric Wieschaus, Stas Shvartsman, @lepuslapis.bsky.social (1/8)
Out now in @pnas.org at doi.org/10.1073/pnas... with @zhaoshh.bsky.social, Alex Jacinto, Eric Wieschaus, Stas Shvartsman, @lepuslapis.bsky.social (1/8)
Reposted by Daniel Alber
Now #published in Phys. Rev. Lett. as an Editors' Suggestion: "Mechanics of poking a cyst" - the first paper from the PhD work of @zhaoshh.bsky.social.
journals.aps.org/prl/abstract...
@mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social
journals.aps.org/prl/abstract...
@mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social
June 5, 2025 at 3:01 PM
Now #published in Phys. Rev. Lett. as an Editors' Suggestion: "Mechanics of poking a cyst" - the first paper from the PhD work of @zhaoshh.bsky.social.
journals.aps.org/prl/abstract...
@mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social
journals.aps.org/prl/abstract...
@mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social
Reposted by Daniel Alber
How many cells do you need to establish PCP? The magic number is 3! Beautiful work by Lena Basta in Danelle Devenport's lab. Happy to have contributed. www.science.org/doi/10.1126/...
Epithelial polarization by the planar cell polarity complex is exclusively non–cell autonomous
For cells to polarize collectively along a tissue plane, asymmetrically localized planar cell polarity (PCP) complexes must form intercellular contacts between neighboring cells. Yet, it is unknown wh...
www.science.org
March 22, 2025 at 1:47 AM
How many cells do you need to establish PCP? The magic number is 3! Beautiful work by Lena Basta in Danelle Devenport's lab. Happy to have contributed. www.science.org/doi/10.1126/...
Reposted by Daniel Alber
How do cells migrate without substrate, e.g. in embryogenesis, when extra-cellular matrix has not yet formed?
Check out our paper in @cp-cellreports.bsky.social on zebrafish lateral mesendoderm migration, led by @stetavano.bsky.social @heisenbergcplab.bsky.social!
www.cell.com/cell-reports...
Check out our paper in @cp-cellreports.bsky.social on zebrafish lateral mesendoderm migration, led by @stetavano.bsky.social @heisenbergcplab.bsky.social!
www.cell.com/cell-reports...
March 14, 2025 at 12:16 PM
How do cells migrate without substrate, e.g. in embryogenesis, when extra-cellular matrix has not yet formed?
Check out our paper in @cp-cellreports.bsky.social on zebrafish lateral mesendoderm migration, led by @stetavano.bsky.social @heisenbergcplab.bsky.social!
www.cell.com/cell-reports...
Check out our paper in @cp-cellreports.bsky.social on zebrafish lateral mesendoderm migration, led by @stetavano.bsky.social @heisenbergcplab.bsky.social!
www.cell.com/cell-reports...
Reposted by Daniel Alber
I am delighted to share with you my first postdoc paper, which has now been published in @currentbiology.bsky.social!
www.cell.com/current-biol...
Thanks to everyone who contributed: A. Chamolly, @aurelienvilledieu.bsky.social, F. Corson and @jeromegros.bsky.
www.cell.com/current-biol...
Thanks to everyone who contributed: A. Chamolly, @aurelienvilledieu.bsky.social, F. Corson and @jeromegros.bsky.
A tension-induced morphological transition shapes the avian extra-embryonic territory
Michaut et al. show that the tension produced during epiboly elastically stretches
the extra-embryonic (EE) territory, while the embryo proper (EP) remains unaffected.
Although the whole epiblast (EP ...
www.cell.com
March 13, 2025 at 11:32 AM
I am delighted to share with you my first postdoc paper, which has now been published in @currentbiology.bsky.social!
www.cell.com/current-biol...
Thanks to everyone who contributed: A. Chamolly, @aurelienvilledieu.bsky.social, F. Corson and @jeromegros.bsky.
www.cell.com/current-biol...
Thanks to everyone who contributed: A. Chamolly, @aurelienvilledieu.bsky.social, F. Corson and @jeromegros.bsky.
Reposted by Daniel Alber
New #preprint: "Euler buckling on curved surfaces" arxiv.org/abs/2503.04303
@zhaoshh.bsky.social and I ask the question that Euler left open: How does an elastic line buckle within a (general) curved surface?
@mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social
@zhaoshh.bsky.social and I ask the question that Euler left open: How does an elastic line buckle within a (general) curved surface?
@mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social
March 7, 2025 at 8:38 AM
New #preprint: "Euler buckling on curved surfaces" arxiv.org/abs/2503.04303
@zhaoshh.bsky.social and I ask the question that Euler left open: How does an elastic line buckle within a (general) curved surface?
@mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social
@zhaoshh.bsky.social and I ask the question that Euler left open: How does an elastic line buckle within a (general) curved surface?
@mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social
Reposted by Daniel Alber
New #preprint: "A model for boundary-driven tissue morphogenesis" arxiv.org/abs/2503.03688.
A great collaboration with @danielalber.bsky.social @zhaoshh.bsky.social, Alexandre Jacinto, Eric Wieschaus, Stas Shvartsman.
@flatironinstitute.org @mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social
A great collaboration with @danielalber.bsky.social @zhaoshh.bsky.social, Alexandre Jacinto, Eric Wieschaus, Stas Shvartsman.
@flatironinstitute.org @mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social
March 6, 2025 at 9:52 AM
New #preprint: "A model for boundary-driven tissue morphogenesis" arxiv.org/abs/2503.03688.
A great collaboration with @danielalber.bsky.social @zhaoshh.bsky.social, Alexandre Jacinto, Eric Wieschaus, Stas Shvartsman.
@flatironinstitute.org @mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social
A great collaboration with @danielalber.bsky.social @zhaoshh.bsky.social, Alexandre Jacinto, Eric Wieschaus, Stas Shvartsman.
@flatironinstitute.org @mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social
Developmental systems have regions that deform actively or passively from their active neighbors. We use a ring of tissue as a model to investigate this boundary-driven morphogenesis in its biological context, learning something about gastrulation and possibly blastopore geometries in the process!
New #preprint: "A model for boundary-driven tissue morphogenesis" arxiv.org/abs/2503.03688.
A great collaboration with @danielalber.bsky.social @zhaoshh.bsky.social, Alexandre Jacinto, Eric Wieschaus, Stas Shvartsman.
@flatironinstitute.org @mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social
A great collaboration with @danielalber.bsky.social @zhaoshh.bsky.social, Alexandre Jacinto, Eric Wieschaus, Stas Shvartsman.
@flatironinstitute.org @mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social
March 6, 2025 at 2:12 PM
Developmental systems have regions that deform actively or passively from their active neighbors. We use a ring of tissue as a model to investigate this boundary-driven morphogenesis in its biological context, learning something about gastrulation and possibly blastopore geometries in the process!
Reposted by Daniel Alber
A duo of preprints on the dynamics of the first cell fate decision in mouse by Madeleine Chalifoux (first grad student in the lab!) and Maria Avdeeva (Flatiron).
We use quantitative live imaging of key cell fate determinants to follow the segregation of inner cell mass and trophectoderm lineages.
We use quantitative live imaging of key cell fate determinants to follow the segregation of inner cell mass and trophectoderm lineages.
March 5, 2025 at 2:54 AM
A duo of preprints on the dynamics of the first cell fate decision in mouse by Madeleine Chalifoux (first grad student in the lab!) and Maria Avdeeva (Flatiron).
We use quantitative live imaging of key cell fate determinants to follow the segregation of inner cell mass and trophectoderm lineages.
We use quantitative live imaging of key cell fate determinants to follow the segregation of inner cell mass and trophectoderm lineages.