Dr. Natalie Clark
@nmclark2.bsky.social
Computational Scientist in the Proteomics Platform at the Broad Institute. Systems biologist integrating ALL the omics data. Views are my own. She/her.
Pinned
ScienceDirect.com | Science, health and medical journals, full text articles and books.
authors.elsevier.com
Proud to share our collaborative effort between the Taiwan Cancer Moonshot Program and the NCI’s Clinical Proteomic Tumor Analysis Consortium (CPTAC), delivering an integrative proteogenomic atlas of lung adenocarcinoma.
Open-access link: authors.elsevier.com/sd/article/S...
Open-access link: authors.elsevier.com/sd/article/S...
Reposted by Dr. Natalie Clark
Back in my day, AI used to stand for Adobe Illustrator! And we hated that, too!
October 29, 2025 at 6:52 PM
Back in my day, AI used to stand for Adobe Illustrator! And we hated that, too!
Reposted by Dr. Natalie Clark
President Donald Trump’s administration has terminated $352 million in grants and contracts this year to the Research Triangle Institute, the United States’s third largest independent research organization, a report estimates.
Cuts in global health and climate hit Research Triangle Institute hard
“Financial drubbing” underscores reliance of some independent research organizations on federal funding
www.science.org
October 9, 2025 at 10:15 PM
President Donald Trump’s administration has terminated $352 million in grants and contracts this year to the Research Triangle Institute, the United States’s third largest independent research organization, a report estimates.
Reposted by Dr. Natalie Clark
Please share & RSVP to join the November 25th webinar!
Hear from the 2025 Philip N. Benfey Arabidopsis Community Lifetime Achievement Awardees! bit.ly/naascawards
@plantevolution.bsky.social
Hear from the 2025 Philip N. Benfey Arabidopsis Community Lifetime Achievement Awardees! bit.ly/naascawards
@plantevolution.bsky.social
September 22, 2025 at 10:03 PM
Please share & RSVP to join the November 25th webinar!
Hear from the 2025 Philip N. Benfey Arabidopsis Community Lifetime Achievement Awardees! bit.ly/naascawards
@plantevolution.bsky.social
Hear from the 2025 Philip N. Benfey Arabidopsis Community Lifetime Achievement Awardees! bit.ly/naascawards
@plantevolution.bsky.social
Reposted by Dr. Natalie Clark
Healey: Massachusetts insurers have to cover the cost of all vaccines approved by the state, no matter what the brainworm in chief says. This includes MassHealth and GIC.
September 4, 2025 at 6:30 PM
Healey: Massachusetts insurers have to cover the cost of all vaccines approved by the state, no matter what the brainworm in chief says. This includes MassHealth and GIC.
Reposted by Dr. Natalie Clark
Regulatory network topology and the genetic architecture of gene expression www.biorxiv.org/content/10.1... 🧬🖥️🧪
August 25, 2025 at 6:30 PM
Regulatory network topology and the genetic architecture of gene expression www.biorxiv.org/content/10.1... 🧬🖥️🧪
Proud to share our collaborative effort between the Taiwan Cancer Moonshot Program and the NCI’s Clinical Proteomic Tumor Analysis Consortium (CPTAC), delivering an integrative proteogenomic atlas of lung adenocarcinoma.
Open-access link: authors.elsevier.com/sd/article/S...
Open-access link: authors.elsevier.com/sd/article/S...
ScienceDirect.com | Science, health and medical journals, full text articles and books.
authors.elsevier.com
August 1, 2025 at 1:49 PM
Proud to share our collaborative effort between the Taiwan Cancer Moonshot Program and the NCI’s Clinical Proteomic Tumor Analysis Consortium (CPTAC), delivering an integrative proteogenomic atlas of lung adenocarcinoma.
Open-access link: authors.elsevier.com/sd/article/S...
Open-access link: authors.elsevier.com/sd/article/S...
Movie you've watched more than 6x using a gif (no Disney, Star Wars, LOTR, or Star Trek).
June 26, 2025 at 9:39 PM
Movie you've watched more than 6x using a gif (no Disney, Star Wars, LOTR, or Star Trek).
Reposted by Dr. Natalie Clark
We're looking for a new PhD candidate to join the lab. Please share 🌱😄
June 5, 2025 at 5:37 AM
We're looking for a new PhD candidate to join the lab. Please share 🌱😄
Reposted by Dr. Natalie Clark
Here's a database from UCLA on Non-NIH funding opportunities ranging from grad students to faculty from a wide range of biological and medical disciplines: biofund.healthsciences.ucla.edu/crt-funding/...
BioFund - a Non-NIH Funding Database | crt-funding
biofund.healthsciences.ucla.edu
April 29, 2025 at 3:56 AM
Here's a database from UCLA on Non-NIH funding opportunities ranging from grad students to faculty from a wide range of biological and medical disciplines: biofund.healthsciences.ucla.edu/crt-funding/...
Reposted by Dr. Natalie Clark
HEY PROTEOMICS PEOPLE! Can you comment here where you learned to do proteomics? I started putting up a survey but based on just the 64 people on our podcast there are too many options for a multiple choice survey effectively. Thank you!
March 20, 2025 at 12:18 PM
HEY PROTEOMICS PEOPLE! Can you comment here where you learned to do proteomics? I started putting up a survey but based on just the 64 people on our podcast there are too many options for a multiple choice survey effectively. Thank you!
Reposted by Dr. Natalie Clark
Reposted by Dr. Natalie Clark
Awesome to see my good friend & amazing scientist Jeff Dangl share with Jonathan Jones and Brian Staskawicz the 2025 Wolf Prize in Agriculture for their pioneering work on plant disease resistance 🧪1/n
wolffund.org.il/jeffery-l-da...
wolffund.org.il/jeffery-l-da...
March 11, 2025 at 2:02 PM
Awesome to see my good friend & amazing scientist Jeff Dangl share with Jonathan Jones and Brian Staskawicz the 2025 Wolf Prize in Agriculture for their pioneering work on plant disease resistance 🧪1/n
wolffund.org.il/jeffery-l-da...
wolffund.org.il/jeffery-l-da...
Can someone please explain to my 11 month old that we lost an hour so he should sleep an hour later, not get up an hour earlier?
In other news, this is my annual complaint about DST. I'm so tired 😴
In other news, this is my annual complaint about DST. I'm so tired 😴
March 10, 2025 at 3:04 PM
Can someone please explain to my 11 month old that we lost an hour so he should sleep an hour later, not get up an hour earlier?
In other news, this is my annual complaint about DST. I'm so tired 😴
In other news, this is my annual complaint about DST. I'm so tired 😴
Reposted by Dr. Natalie Clark
My daughter's daycare just sent out an email about potentially needing to layoff staff because new babies about to start withdrew because of parental job losses. So if you're wondering how government layoffs and mass contract cancellations will affect the economy, here's an example
March 7, 2025 at 6:54 PM
My daughter's daycare just sent out an email about potentially needing to layoff staff because new babies about to start withdrew because of parental job losses. So if you're wondering how government layoffs and mass contract cancellations will affect the economy, here's an example
Reposted by Dr. Natalie Clark
Travel permits of all US government employees (USDA, NSF) have been revoked shortly before the the maize meeting affecting:
- The chair of the meeting
- The winner of the most prestigious McClintock award
- A plenary speaker
- Two short talk presenters
- 22 scientists presenting posters.
#MGM2025
- The chair of the meeting
- The winner of the most prestigious McClintock award
- A plenary speaker
- Two short talk presenters
- 22 scientists presenting posters.
#MGM2025
March 7, 2025 at 2:39 AM
Travel permits of all US government employees (USDA, NSF) have been revoked shortly before the the maize meeting affecting:
- The chair of the meeting
- The winner of the most prestigious McClintock award
- A plenary speaker
- Two short talk presenters
- 22 scientists presenting posters.
#MGM2025
- The chair of the meeting
- The winner of the most prestigious McClintock award
- A plenary speaker
- Two short talk presenters
- 22 scientists presenting posters.
#MGM2025
NIH websites are down because of a DNS attack. They are working on it. Via reddit.
March 2, 2025 at 1:01 AM
NIH websites are down because of a DNS attack. They are working on it. Via reddit.
Just arrived for #USHUPO2025! Excited to give a talk at the #CPTAC workshop Monday evening. Feel free to reach out directly if you'd like to chat about multi-omics analysis!
February 23, 2025 at 7:31 PM
Just arrived for #USHUPO2025! Excited to give a talk at the #CPTAC workshop Monday evening. Feel free to reach out directly if you'd like to chat about multi-omics analysis!
Reposted by Dr. Natalie Clark
congrats to Brendan Floyd, postdoc in @carolynbertozzi.bskyverified.social lab on his exciting work "mapping the nanoscale organization of the human cell surface proteome"
High resolution, High Effort, and Creative Analytics produce new views of the cell surface
www.biorxiv.org/content/10.1...
High resolution, High Effort, and Creative Analytics produce new views of the cell surface
www.biorxiv.org/content/10.1...
February 18, 2025 at 4:31 PM
congrats to Brendan Floyd, postdoc in @carolynbertozzi.bskyverified.social lab on his exciting work "mapping the nanoscale organization of the human cell surface proteome"
High resolution, High Effort, and Creative Analytics produce new views of the cell surface
www.biorxiv.org/content/10.1...
High resolution, High Effort, and Creative Analytics produce new views of the cell surface
www.biorxiv.org/content/10.1...
Reposted by Dr. Natalie Clark
To US colleagues who have lost or are in imminent danger of losing their jobs: please DM whether we can accommodate your research.
February 15, 2025 at 1:18 PM
To US colleagues who have lost or are in imminent danger of losing their jobs: please DM whether we can accommodate your research.
Reposted by Dr. Natalie Clark
Honored to be interviewed about the rising incidence of lung cancer in non-smokers and especially females on @wral.bsky.social to shed light on #LCSM during #LungCancerAwarenessMonth and highlight the #HearHer campaign
www.wral.com/lifestyle/he...
@younglungcancer.bsky.social
www.wral.com/lifestyle/he...
@younglungcancer.bsky.social
Rising lung cancer cases in nonsmoking women under 50: Experts urge awareness
An unexpected surge in lung cancer cases among nonsmoking women under 50 is raising alarms among oncologists, emphasizing the need for heightened awareness.
www.wral.com
November 22, 2024 at 11:54 PM
Honored to be interviewed about the rising incidence of lung cancer in non-smokers and especially females on @wral.bsky.social to shed light on #LCSM during #LungCancerAwarenessMonth and highlight the #HearHer campaign
www.wral.com/lifestyle/he...
@younglungcancer.bsky.social
www.wral.com/lifestyle/he...
@younglungcancer.bsky.social
Reposted by Dr. Natalie Clark
Our Arabidizzle ubiquitinome paper is published! Awesome collaboration w @diorkelley.bsky.social lab lead by Gaoyuan Song - key contributions from so many others (@dormichicken.bsky.social @nmclark2.bsky.social)
@theplantcell.bsky.social #proteomics #PlantScience
academic.oup.com/plcell/advan...
@theplantcell.bsky.social #proteomics #PlantScience
academic.oup.com/plcell/advan...
Quantitative proteomics reveals extensive lysine ubiquitination and transcription factor stability states in Arabidopsis
An antibody-based approach to enrich ubiquitinated peptides reveals Arabidopsis root, seedling, and leaf ubiquitinomes.
academic.oup.com
November 21, 2024 at 7:17 PM
Our Arabidizzle ubiquitinome paper is published! Awesome collaboration w @diorkelley.bsky.social lab lead by Gaoyuan Song - key contributions from so many others (@dormichicken.bsky.social @nmclark2.bsky.social)
@theplantcell.bsky.social #proteomics #PlantScience
academic.oup.com/plcell/advan...
@theplantcell.bsky.social #proteomics #PlantScience
academic.oup.com/plcell/advan...
Reposted by Dr. Natalie Clark
"Dark TFs": new manuscript mapped 166 uncharacterized human transcription factors, finding half bind genomic "dark matter," often closed chromatin rich in transposable elements.
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
November 19, 2024 at 11:41 PM
"Dark TFs": new manuscript mapped 166 uncharacterized human transcription factors, finding half bind genomic "dark matter," often closed chromatin rich in transposable elements.
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
Reposted by Dr. Natalie Clark
There is a whole crop of us who lost our minds trying to ramp up careers while handling ever-changing childcare arrangements.
Our family went ~ two years without a solid month of scheduled childcare. It has taken so much time & energy to recover, w/the loss of productivity still being felt.
Our family went ~ two years without a solid month of scheduled childcare. It has taken so much time & energy to recover, w/the loss of productivity still being felt.
November 19, 2024 at 1:02 AM
There is a whole crop of us who lost our minds trying to ramp up careers while handling ever-changing childcare arrangements.
Our family went ~ two years without a solid month of scheduled childcare. It has taken so much time & energy to recover, w/the loss of productivity still being felt.
Our family went ~ two years without a solid month of scheduled childcare. It has taken so much time & energy to recover, w/the loss of productivity still being felt.
Reposted by Dr. Natalie Clark
To read more about Boltz-1 check out:
- Our short blog-post jclinic.mit.edu/boltz-1/
- Our technical report: gcorso.github.io/assets/boltz...
- Our code, model and instructions: github.com/jwohlwend/bo...
I'll share a separate thread with more details about the process and interesting findings!
- Our short blog-post jclinic.mit.edu/boltz-1/
- Our technical report: gcorso.github.io/assets/boltz...
- Our code, model and instructions: github.com/jwohlwend/bo...
I'll share a separate thread with more details about the process and interesting findings!
Introducing Boltz-1: Democratizing Biomolecular Interaction Modeling – MIT Jameel Clinic
jclinic.mit.edu
November 17, 2024 at 4:21 PM
To read more about Boltz-1 check out:
- Our short blog-post jclinic.mit.edu/boltz-1/
- Our technical report: gcorso.github.io/assets/boltz...
- Our code, model and instructions: github.com/jwohlwend/bo...
I'll share a separate thread with more details about the process and interesting findings!
- Our short blog-post jclinic.mit.edu/boltz-1/
- Our technical report: gcorso.github.io/assets/boltz...
- Our code, model and instructions: github.com/jwohlwend/bo...
I'll share a separate thread with more details about the process and interesting findings!