Gulnara Tagirdzhanova
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metalichen.bsky.social
Gulnara Tagirdzhanova
@metalichen.bsky.social
Postdoc at @deepsthlmuni.bsky.social‬ (Stockholm University)

lichen symbiosis | metagenomics | evolution |

Previously at @thesainsburylab.bsky.social. PhD from @ualberta.bsky.social

Personal website: metalichen.github.io

#StandWithUkraine
she/her
Pinned
Our study on #lichen #symbiosis is out in @currentbiology.bsky.social! How can multiple microbes create a large, 3D, and structurally complex organism? To answer this question, we used #metagenomics, #metatranscriptomics, and a bit of protein structure modeling 🧵1/7
🧬 🖥️ 🧪 🦠 🧫 #SymbioSky
Reposted by Gulnara Tagirdzhanova
#Lichens form their complex thalli through a partnership involving at least a fungus and an alga. But can these living structures be rebuilt in vitro? For more than a century, people have tried. With @spribille.bsky.social we revisited 150 years of #lichen #resynthesis to ask: has anyone succeeded?
November 7, 2025 at 2:07 AM
Reposted by Gulnara Tagirdzhanova
I had such fun thinking, reading and writing this Tansley Review on #arbuscular #mycorrhizal #fungal mycelia. We need a more fungal-centric view to better understand not only the AM fungi, but also their many ecological roles.
@newphyt.bsky.social

🔗 nph.onlinelibrary.wiley.com/share/DHGB3S....
October 30, 2025 at 4:56 PM
Reposted by Gulnara Tagirdzhanova
1/ Ever needed to annotate TEs in a fungal genome, but didn't know where to start?

We have released #MycoMobilome, a community-focused non-redundant database of transposable element consensus sequences for the fungal kingdom, constructed from >4,000 fungal genomes!

www.biorxiv.org/content/10.1...
October 29, 2025 at 9:02 AM
Reposted by Gulnara Tagirdzhanova
In this paper, we show that photobiont diversity increases as lichens age. Interestingly, as the thallus grows, autosporine algae become more prevalent at the expense of zoosporine algae, likely because the latter play a key role in lichen establishment. 1url.cz/@Proto
October 21, 2025 at 8:04 AM
Reposted by Gulnara Tagirdzhanova
Wooo!
NOD-like receptor genes evolve under diversity-enhancing mechanisms in a fungal species complex https://www.biorxiv.org/content/10.1101/2025.09.29.679196v1
October 1, 2025 at 5:47 AM
Reposted by Gulnara Tagirdzhanova
VACANCY: Trainee Lichenologist @n-t-s.bsky.social

Not seen one of these advertised before!

www.asva.co.uk/jobs/trainee...
Trainee Lichenologist
www.asva.co.uk
September 10, 2025 at 5:36 PM
Reposted by Gulnara Tagirdzhanova
🚨 Save the date! Thrilled to be co-organizing the next iteration of the @embl.org Symposium on the Cellular Mechanics of Symbiosis (📅 March 17-20), w/ @floravincent.bsky.social, @hassansalem.bsky.social & Tom Richards.
www.embl.org/about/info/c...
#EESSymbiosis #Symbiosis #SymbioSky #MicroSky 🦠
The cellular mechanics of symbiosis: sensing friend from foe
www.embl.org
September 8, 2025 at 10:24 AM
Reposted by Gulnara Tagirdzhanova
We have several open positions in my group, funded from the ERC Grant on the Early Sequestered Germline of Fungi. We search broadly for applicants at both PhD and master-level, with a dedicated interest in fungal evolutionary biology. Please forward and RT!
Find the positions here: su.varbi.com
Lediga jobb vid Stockholms universitet
Jobb
su.varbi.com
September 7, 2025 at 1:13 PM
Reposted by Gulnara Tagirdzhanova
Delighted that our work on the Sanctuary Starship #transposon is now published! A big thanks to all co-authors, especially to the ever-amazing @mcdonaldmeganc.bsky.social for her mentorship!

doi.org/10.1128/mbio...
Sanctuary: a Starship transposon facilitating the movement of the virulence factor ToxA in fungal wheat pathogens | mBio
The work presented here expands our understanding of a novel group of mobile genetic elements called Starships that facilitate the horizontal exchange of numerous genes between fungal pathogens. Our a...
doi.org
September 6, 2025 at 1:11 PM
Reposted by Gulnara Tagirdzhanova
The grave risks for science as the whole of leaving fundamental scientific infrastructure in the hands of for-profit capitalist company. Essential scholarly services should be internationally curated by value-based societies/orders/colleges.
🧪
August 13, 2025 at 8:34 AM
Reposted by Gulnara Tagirdzhanova
📣 NEW PREPRINT 📝

We identified evolutionary origins of many fungal effectors!
We show that fungi secrete lots of antimicrobial proteins, and that some of them were repurposed by plant pathogens for host immune suppression.
www.biorxiv.org/content/10.1...

cc @teamthomma.bsky.social
Plant-associated fungi co-opt ancient antimicrobials for host manipulation
Evolutionary histories of effector proteins secreted by fungal pathogens to mediate plant colonization remain largely elusive. While most functionally characterized effectors modulate plant immunity, ...
www.biorxiv.org
August 15, 2025 at 7:47 AM
Reposted by Gulnara Tagirdzhanova
It started as a master thesis project by Markus Hiltunen, and ended up in this publication in Science. What a fun project to work on! Thanks Markus - and all other coauthors, too, for a great team work! www.science.org/doi/10.1126/...
Early germline sequestration in a basidiomycete fungus
In sexual organisms, inheritance of new mutations is highly dependent on the timing of germline definition. Here, we used the fairy ring–forming fungus Marasmius oreades to challenge the general assum...
www.science.org
August 14, 2025 at 7:55 PM
Reminder about our special issue on lichen symbiosis in Lichenologist 👇 the deadline for submission is in September
🌟Call for Papers on #Lichen #symbiosis🌟 Thrilled to be a guest editor for The Lichenologist, together with @veera-t-nogerius.bsky.social, @ioanabrannstrom.bsky.social, and Ellen Cameron. Send us papers on the inner workings of lichens, submission is open till September 2025!
tinyurl.com/2w7wwubm
August 14, 2025 at 5:11 PM
Happy to share that I’ve now joined @hannajohannesson.bsky.social's group in Stockholm University! Thanks to support from Wenner-Gren Foundation, I will be working on self/non-self recognition in lichen symbionts
August 14, 2025 at 4:55 PM
Which both were great and both made me cry my eyes out. I have resigned myself to the world being horrible and getting worse, I can function pretty well despite it, but
I also loved how as I was clearing out the said apartment, I got to see Norwich pride from my window, and then arrived to Sweden precisely in time for Stockholm pride
August 7, 2025 at 1:02 PM
Some belated personal news: at the end of July it was my time to say bye to @thesainsburylab.bsky.social and Norwich. Already missing my dear friends and the lab! Big thanks to @talbotlabtsl.bsky.social and everyone else with whom I crossed paths in these 3 years!
August 6, 2025 at 3:03 PM
Reposted by Gulnara Tagirdzhanova
It looks like Hiroshima and the current Gaza death toll is basically the same (>60k)
"It's just fields and fields of gray ash."

www.instagram.com/reel/DM8H5L2...
August 5, 2025 at 1:34 PM
Reposted by Gulnara Tagirdzhanova
📣 Happy to see the journal publication 📄 of our work on Starships 🚀 in Verticillium fungi: terrific work led by @yukiyosato.bsky.social
rdcu.be/exBSp
Starship giant transposons dominate plastic genomic regions in a fungal plant pathogen and drive virulence evolution
Nature Communications - Giant transposons, known as ‘Starships’, mediate horizontal gene transfer between fungal genomes. Here, Sato et al. show that Starships occupy genome regions...
rdcu.be
July 24, 2025 at 10:40 AM
Reposted by Gulnara Tagirdzhanova
Translational research is digging for gold. Basic research is learning where and what to dig. The more funding is diverted to translation, the more we deplete the research ecosystem, driving the supplies of "gold" - immediately translatable findings and innovations - to unsustainably low levels.
July 19, 2025 at 8:46 AM
Reposted by Gulnara Tagirdzhanova
my modest disagreement is that i think it is important to signal virtue even if, privately, you are a piece of shit. performing decency is an important part of maintaining the norm that decency is part of a well ordered society.
you are SUPPOSED to signal virtue. The actual argument, such as it exists, is that people are signaling virtue while not actually being virtuous. But you are supposed to signal virtue and BE VIRTUOUS.
Really was one of the dumbest and most harmful things possible for “virtue signaling” to become some kind of epithet. Sending externally visible signals that you are engaging in pro-social behavior is normal, natural, and good, it’s how society works. Other people can’t read your fucking mind.
July 13, 2025 at 2:06 PM
Reposted by Gulnara Tagirdzhanova
I’m ready at this point to say I’m done with anyone in the news criticizing Bluesky
I checked because I could not believe this one was real and folks, this is real.
July 8, 2025 at 8:50 PM
Reposted by Gulnara Tagirdzhanova
Okay, now this is wild - You can expose a desert lichen Clavascidium lacinulatum to UVC radiation for 3 months, at same dose that kills Deinococcus radiodurans, the most radiation-resistant bacteria, in 60 sec - and it survives! Lichens rock!

www.liebertpub.com/doi/10.1089/...
UVC-Intense Exoplanets May Not Be Uninhabitable: Evidence from a Desert Lichen | Astrobiology
Many of the recently discovered Earth-like exoplanets are hosted by M and F stars, stars that emit intense UVC, especially during a flare. We studied whether such planets are nevertheless habitable by irradiating a desert lichen, Clavascidium lacinulatum, with 254-nm 55 W/m2 UVC nonstop for 3 months in the laboratory. Only 50% of its algal photobiont cells were inactivated. To put this in perspective, we used the same setup to challenge the photobiont cells but grown in pure culture, and Deinococcus radiodurans, the most radiation-resistant bacterium on Earth. Entire monolayers of hundreds of cells were inactivated in just 60 s. Further studies indicated that the cortex of the lichen was rendered UVC-opaque by deposits of phenolic secondary metabolites in its interstices. The lichen was injured only because, while most photochemical reactive oxygen species were quenched, photochemical ozone was not. We conclude that UVC-intense exoplanets are not necessarily uninhabitable to photosynthetic organisms.
www.liebertpub.com
June 27, 2025 at 10:09 AM
Reposted by Gulnara Tagirdzhanova
New Consensus Statement in Nature Microbiology!
Working with low-biomass microbiome samples? From deep subsurface rocks to human lungs, contamination is a major challenge. We offer field-to-data analysis guidelines to help keep your results clean.
📖 doi.org/10.1038/s415...
Guidelines for preventing and reporting contamination in low-biomass microbiome studies - Nature Microbiology
In this Consensus Statement, the authors outline strategies for processing, analysing and interpreting low-biomass microbiome samples, and provide recommendations to minimize contaminants.
doi.org
June 23, 2025 at 4:54 PM
Reposted by Gulnara Tagirdzhanova
🚨 Job Alert at RBG Kew! We are looking for Lab Research Assistants in genomics to join our Fungarium Sequencing Project! Do you like Fungi? Do you want to develop new -omics techniques? Interested in historical collections? Join the team! Posts to start ASAP. Apply here:https://lnkd.in/e2BpWJpA
June 25, 2025 at 10:58 AM
Reposted by Gulnara Tagirdzhanova
My friend and colleague Remco Heesen once told me study of social epistemology of science made him "less trusting of any particular scientific paper but more impressed by science as a whole." I honestly think that's the right lesson to draw. But I think holding both attitudes doesn't come naturally.
The most important thing about science the public needs to remember is that the set of experimental and theoretical methods we refer to as "science" is the best, most reliable way of knowing we currently have.

It's rough around the edges but it works way better than anything else.
Watching people not realize this about his work, and then seeing it weaponized against climate policy, sent poor old Bruno Latour into a full-blown case of abyss gaze.
June 24, 2025 at 5:38 AM