Melanie McDowell
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melaniemcdowell.bsky.social
Melanie McDowell
@melaniemcdowell.bsky.social
Group Leader at MPI of Biophysics exploring ER membrane protein biogenesis
Pinned
Our first lab paper is out! We identify and solve the first structure of the SND3 translocon involved in fungal membrane protein insertion. Congratulations @tzujingyang.bsky.social, and our colleagues @saumyakm.bsky.social, @hummerlab.bsky.social and Julian Langer. Read more ⬇️ and ➡️ rdcu.be/eNgIO
SNDing proteins into the membrane! Our new publication from @melaniemcdowell.bsky.social ’s group identifies the SND3 protein as a new route for membrane protein insertion! 🍄 📘 Read more here: www.mpg.de/25599408/102... Image: Louise Duever.
Our first lab paper is out! We identify and solve the first structure of the SND3 translocon involved in fungal membrane protein insertion. Congratulations @tzujingyang.bsky.social, and our colleagues @saumyakm.bsky.social, @hummerlab.bsky.social and Julian Langer. Read more ⬇️ and ➡️ rdcu.be/eNgIO
SNDing proteins into the membrane! Our new publication from @melaniemcdowell.bsky.social ’s group identifies the SND3 protein as a new route for membrane protein insertion! 🍄 📘 Read more here: www.mpg.de/25599408/102... Image: Louise Duever.
October 30, 2025 at 5:42 PM
Reposted by Melanie McDowell
This was a fun new collaboration using selective ribosome profiling to understand how the subunit composition of the ER translocon is tailored by the nascent chain. Congratulations to everyone involved!

www.nature.com/articles/s41...
Global analysis of translocon remodeling during protein synthesis at the ER - Nature Structural & Molecular Biology
The authors use selective ribosome profiling to define how and when factors for N-glycosylation and membrane insertion engage and disengage from the core Sec61 translocation channel during biogenesis ...
www.nature.com
October 20, 2025 at 8:08 PM
Reposted by Melanie McDowell
Great session with Melanie McDowell today!
She shared exciting insights into how proteins find their way into the ER.

#imprs #imprs_cbp #phd #gradschool #biophysics
September 16, 2025 at 12:55 PM
Reposted by Melanie McDowell
Out today in @nature.com: Together with the Honigmann, Shevchenko, Drobot and Hof labs, we present a general workflow for imaging the localization and transport of individual lipids in cells and mapping their metabolism.
www.nature.com/articles/s41...
August 21, 2025 at 5:19 AM
Reposted by Melanie McDowell
Super excited to share our new #preprint on #BioRxiv
We reveal the structural basis of a partnership between the ER membrane complex (EMC) and the P5A-ATPase Spf1 — an insertase–dislocase duo that coordinates membrane protein biogenesis and quality control.
www.biorxiv.org/content/10.1...
Structural basis of an EMC:Spf1 insertase-dislocase complex in the eukaryotic endoplasmic reticulum
Most eukaryotic membrane proteins are inserted into the membrane at the endoplasmic reticulum (ER). This essential but error-prone process relies on molecular quality control machineries to prevent mi...
www.biorxiv.org
August 11, 2025 at 12:35 PM
Reposted by Melanie McDowell
Excited to share our latest study in @natcomms.nature.com , where we characterize the chaperone function of the ER membrane protein complex (EMC)—supporting membrane protein biogenesis beyond insertion!
1/9

www.nature.com/articles/s41...
The EMC acts as a chaperone for membrane proteins - Nature Communications
Membrane proteins are essential for any cell but difficult to fold. Here, the authors show that the EMC acts as a chaperone for membrane proteins. They dissect client recognition and provide a molecul...
www.nature.com
August 5, 2025 at 1:18 PM
The power of Chaetomium 🧫🏋‍♂️ super happy for the collaboration on this project! Congratulations to @ahmed-noor-agip.bsky.social, @pamornelas.bsky.social and all co-authors 🙌🏻
🔬 Check out our new article on the mitochondrial TOM complex! Researchers from the Structural Biology Department have resolved a high-resolution structure of the main entry point for proteins into mitochondria. 🚪 🤩
Read more: www.biophys.mpg.de/2876415/tom-main-gate-into-mitochondria?c=2011019
Visualizing the Main Gate into Mitochondria
www.biophys.mpg.de
July 29, 2025 at 7:58 AM
Reposted by Melanie McDowell
Mark your calendars:
Our 2nd International Symposium on "Dynamic Organization of Cellular Protein Machineries" takes place from March 23-25 2026 in Freiburg. We have an amazing line-up of external and internal speakers and look forward to exciting presentations and discussions!

@uni-freiburg.de
July 24, 2025 at 12:19 PM
Proud to share our first lab pre-print: “SND3 is the membrane insertase within a fungal multipass translocon” where @tzujingyang.bsky.social solved the structure of a ribosome-associated SND3-translocon complex involved in ER membrane protein insertion ➡️ doi.org/10.1101/2025...
July 12, 2025 at 12:49 AM
Reposted by Melanie McDowell
Very special feelings to announce this one... A project that started like 10 years ago is reaching the finish line, ready to shine. In a dream-team with @beckmannlab.bsky.social we solved the long-chased structure of the active membrane protein insertase SecYEG-YidC
www.biorxiv.org/content/10.1...
Substrate-induced assembly and functional mechanism of the bacterial membrane protein insertase SecYEG-YidC
The universally conserved Sec translocon and the YidC/Oxa1-type insertases mediate biogenesis of alpha-helical membrane proteins, but the molecular basis of their cooperation has remained disputed over decades. A recent discovery of a multi-subunit insertase in eukaryotes has raised the question about the architecture of the putative bacterial ortholog SecYEG-YidC and its functional mechanism. Here, we combine cryogenic electron microscopy with cell-free protein synthesis in nanodiscs to visualize biogenesis of the polytopic membrane protein NuoK, the subunit K of NADH-quinone oxidoreductase, that requires both SecYEG and YidC for insertion. We demonstrate that YidC is recruited to the back of the translocon at the late stage of the substrate insertion, in resemblance to the eukaryotic system, and in vivo experiments indicate that the complex assembly is vital for the cells. The nascent chain does not utilize the lateral gate of SecYEG, but enters the lipid membrane at the SecYE-YidC interface, with YidC being the primary insertase. SecYEG-YidC complex promotes folding of the nascent helices at the interface prior their insertion, so the examined cellular pathway follows the fundamental thermodynamic principles of membrane protein folding. Our data provide the first detailed insight on the elusive insertase machinery in the physiologically relevant environment, highlight the importance of the nascent chain for its assembly, and prove the evolutionary conservation of the gate-independent insertion route. ### Competing Interest Statement The authors have declared no competing interest. Deutsche Forschungsgemeinschaft, https://ror.org/018mejw64, Ke1879/3, 267205415 (CRC 1208) European Research Council, https://ror.org/0472cxd90, CRYOTRANSLATION
www.biorxiv.org
May 27, 2025 at 9:21 AM
Reposted by Melanie McDowell
🎉 We’re absolutely thrilled: SCALE has been selected as a DFG Excellence Cluster!
A huge thank you to our incredible team—this would not have been possible without your dedication and talent. 🙌 @dfg.de
#ClustersOfExcellence #SCALEcluster 🧵
May 23, 2025 at 7:27 AM
Reposted by Melanie McDowell
Thank you so much for guiding me on this amazing journey, @poulnissen.bsky.social, @charlottstock.bsky.social, and @tdieudonne.bsky.social. So great and thorough discussion with @melaniemcdowell.bsky.social, @henrietteautzen.bsky.social and Daan van Aalten. I highly appreciate your involvement.
🎉Congrats @tomasheger.bsky.social for this excellent PhD defense. You were the expert in the room. Very very proud supervisors with @charlottstock.bsky.social and @poulnissen.bsky.social ! Many thanks to the jury members Daan van Aalten, @henrietteautzen.bsky.social and @melaniemcdowell.bsky.social
January 18, 2025 at 11:42 PM
Congratulations on an excellent PhD defense Dr. @tomasheger.bsky.social! It was a fun day and great discussion.
Huge congrats to @tomasheger.bsky.social who succesfully defended his PhD yesterday.
Such a joy to supervise with @tdieudonne.bsky.social and @poulnissen.bsky.social.
Big thank you to @melaniemcdowell.bsky.social, @henrietteautzen.bsky.social and Daan van Aalten for a great discussion.
P-type ❤️💙💛
January 18, 2025 at 6:30 PM