Juan Camilo Rojas E.
@juank1892.bsky.social
A nomad and researcher hoping to work for a better society. Currently excited about #mass_spectrometry #PTMS and #XLMS
@juank_MassSpec
linkedin.com/in/juan-camilo-rojas-echeverri-a7490436
@juank_MassSpec
linkedin.com/in/juan-camilo-rojas-echeverri-a7490436
Had a great time at the GLYCOSCIENCE NL 2025 meeting last Friday—diverse and fascinating glycosylation topics.
I also shared a sneak peek of work with the brilliant Nika Šimičić and Noortje de Haan. More soon—stay tuned for our cell-surface glycoproteome study in colorectal cancer cell lines!
I also shared a sneak peek of work with the brilliant Nika Šimičić and Noortje de Haan. More soon—stay tuned for our cell-surface glycoproteome study in colorectal cancer cell lines!
July 1, 2025 at 9:07 AM
Had a great time at the GLYCOSCIENCE NL 2025 meeting last Friday—diverse and fascinating glycosylation topics.
I also shared a sneak peek of work with the brilliant Nika Šimičić and Noortje de Haan. More soon—stay tuned for our cell-surface glycoproteome study in colorectal cancer cell lines!
I also shared a sneak peek of work with the brilliant Nika Šimičić and Noortje de Haan. More soon—stay tuned for our cell-surface glycoproteome study in colorectal cancer cell lines!
Thank you very much @sinzandrea.bsky.social ! It was a pleasure to have you at my PhD defense!
Thank you for your support through the finishing steps of this cycle! Looking forward to the new cool things this mass spec nerd can get its hands on :)
Thank you for your support through the finishing steps of this cycle! Looking forward to the new cool things this mass spec nerd can get its hands on :)
🧪Congratulations 🎉 Juan @juank1892.bsky.social to a successful PhD defense in the Hoffmann lab. @unileipzig.bsky.social
Great job and so well deserved!🎉🎉🎉
Great job and so well deserved!🎉🎉🎉
July 1, 2025 at 8:44 AM
Thank you very much @sinzandrea.bsky.social ! It was a pleasure to have you at my PhD defense!
Thank you for your support through the finishing steps of this cycle! Looking forward to the new cool things this mass spec nerd can get its hands on :)
Thank you for your support through the finishing steps of this cycle! Looking forward to the new cool things this mass spec nerd can get its hands on :)
Happy to finally share my last contribution of my PhD work on protein carbonylation. These diverse and low abundant non-enzymatic PTMs have strong implications in protein structure. Here we show how we managed to consistently detect them in serum of 68 individuals.
pubs.acs.org/doi/10.1021/...
pubs.acs.org/doi/10.1021/...
Screening of Protein Carbonylation Sites in Human Serum by Ion Mobility Mass Spectrometry
Excessive oxidative stress, associated with various diseases, can induce protein carbonylation-nonenzymatic modifications involving aldehyde or keto group formation. These modifications are structural...
pubs.acs.org
June 16, 2025 at 10:59 AM
Happy to finally share my last contribution of my PhD work on protein carbonylation. These diverse and low abundant non-enzymatic PTMs have strong implications in protein structure. Here we show how we managed to consistently detect them in serum of 68 individuals.
pubs.acs.org/doi/10.1021/...
pubs.acs.org/doi/10.1021/...
Reposted by Juan Camilo Rojas E.
Come on down! Two posters for the price of one! MP224/225 to get an overview of the @talusbio.bsky.social transcription factor atlas with Daniele Canzani and a vignette of applying the platform to mechanism of action studies with Julia Robbins. #ASMS2025
June 2, 2025 at 2:55 PM
Come on down! Two posters for the price of one! MP224/225 to get an overview of the @talusbio.bsky.social transcription factor atlas with Daniele Canzani and a vignette of applying the platform to mechanism of action studies with Julia Robbins. #ASMS2025
Reposted by Juan Camilo Rojas E.
If there any #Sciex decision makers here on Bluesky - I urge you to reconsider. Skyline/Proteowizard support is not only important for your customers using these tools, but it also benefits other bioinformatics efforts that depend on these tools.
Disappointing to see, across both parties.
Sciex is no longer providing funding for Skyline/Proteowizard as part of the multi-vendor agreement to keep Skyline supported across all major vendors.
I can see the arguments from both sides, just a shame it's resulted in this.
Sciex is no longer providing funding for Skyline/Proteowizard as part of the multi-vendor agreement to keep Skyline supported across all major vendors.
I can see the arguments from both sides, just a shame it's resulted in this.
May 15, 2025 at 1:24 AM
If there any #Sciex decision makers here on Bluesky - I urge you to reconsider. Skyline/Proteowizard support is not only important for your customers using these tools, but it also benefits other bioinformatics efforts that depend on these tools.
Reposted by Juan Camilo Rojas E.
Beyond the 2025 Letters of Support for Skyline:
skyline.ms/project/home...
As a consultant, it’s easy to recommend an MS vendor that contributes to Skyline.
Currently: Agilent, Bruker, Sciex, Shimadzu, Thermo, and Waters
Their support ensures that there is a vendor-neutral data analysis option.
skyline.ms/project/home...
As a consultant, it’s easy to recommend an MS vendor that contributes to Skyline.
Currently: Agilent, Bruker, Sciex, Shimadzu, Thermo, and Waters
Their support ensures that there is a vendor-neutral data analysis option.
Start Page: /home/software/Skyline/funding/2025 LOS
skyline.ms
April 28, 2025 at 7:55 AM
Beyond the 2025 Letters of Support for Skyline:
skyline.ms/project/home...
As a consultant, it’s easy to recommend an MS vendor that contributes to Skyline.
Currently: Agilent, Bruker, Sciex, Shimadzu, Thermo, and Waters
Their support ensures that there is a vendor-neutral data analysis option.
skyline.ms/project/home...
As a consultant, it’s easy to recommend an MS vendor that contributes to Skyline.
Currently: Agilent, Bruker, Sciex, Shimadzu, Thermo, and Waters
Their support ensures that there is a vendor-neutral data analysis option.
Reposted by Juan Camilo Rojas E.
Check out our upcoming webinar! In this US HUPO X ABRF crossover event, you'll learn about where AI is currently used in proteomics and where it may be transformative in the future. Register now: ow.ly/tKB750VB1PN 🧪
April 16, 2025 at 6:00 PM
Check out our upcoming webinar! In this US HUPO X ABRF crossover event, you'll learn about where AI is currently used in proteomics and where it may be transformative in the future. Register now: ow.ly/tKB750VB1PN 🧪
Reposted by Juan Camilo Rojas E.
A few more spots are still open for some of the in-person programs at May Institute on Computation and Statistics for Mass Spectrometry and Proteomics on April 28 – May 11, 2025 on the campus of Northeastern University in Boston MA computationalproteomics.khoury.northeastern.edu
May Institute – Computation and statistics for mass spectrometry and proteomics
computationalproteomics.khoury.northeastern.edu
April 15, 2025 at 6:10 PM
A few more spots are still open for some of the in-person programs at May Institute on Computation and Statistics for Mass Spectrometry and Proteomics on April 28 – May 11, 2025 on the campus of Northeastern University in Boston MA computationalproteomics.khoury.northeastern.edu
Reposted by Juan Camilo Rojas E.
I’m running a Skyline metabolomics “bite” as part of the UC Davis Bits and Bites series.
It covers four tutorials and is a great way to immerse yourself into Skyline.
24th April, 9 am - 1 pm PT. $175.
Covers QQQ, high res, cal curves, and CE optimisation.
metabolomics.ucdavis.edu/bits-bites--03
It covers four tutorials and is a great way to immerse yourself into Skyline.
24th April, 9 am - 1 pm PT. $175.
Covers QQQ, high res, cal curves, and CE optimisation.
metabolomics.ucdavis.edu/bits-bites--03
Bits & Bites # 03
Bits & Bites # 03: Skyline: Getting Started with Targeted Metabolomics Data ProcessingDate & Time: April 24, 2025, from 9 am to 1 pm PTInstructor: Dr. Christopher Ashwood, Protea GlycosciencesRegistra...
metabolomics.ucdavis.edu
April 15, 2025 at 2:18 AM
I’m running a Skyline metabolomics “bite” as part of the UC Davis Bits and Bites series.
It covers four tutorials and is a great way to immerse yourself into Skyline.
24th April, 9 am - 1 pm PT. $175.
Covers QQQ, high res, cal curves, and CE optimisation.
metabolomics.ucdavis.edu/bits-bites--03
It covers four tutorials and is a great way to immerse yourself into Skyline.
24th April, 9 am - 1 pm PT. $175.
Covers QQQ, high res, cal curves, and CE optimisation.
metabolomics.ucdavis.edu/bits-bites--03
Reposted by Juan Camilo Rojas E.
Do you have a passion for research software and believe in the power of Open Science to drive advancements in healthcare? If so, we are looking for you! www.lumc.nl/en/about-lum...
Research Software Trainer | LUMC
Do you have a passion for research software and believe in the power of Open Science to drive advancements in healthcare? As a Research Software Trainer at LUMC, you contribute to expanding training c...
www.lumc.nl
February 19, 2025 at 9:56 AM
Do you have a passion for research software and believe in the power of Open Science to drive advancements in healthcare? If so, we are looking for you! www.lumc.nl/en/about-lum...
Reposted by Juan Camilo Rojas E.
If you're looking at peptide differential expression. Skyline is insanely powerful , especially how it seamlessly calculates peak areas across different conditions and makes heatmaps and volcano plots
January 29, 2025 at 7:23 PM
If you're looking at peptide differential expression. Skyline is insanely powerful , especially how it seamlessly calculates peak areas across different conditions and makes heatmaps and volcano plots