Magnus Palmblad
@magnuspalmblad.bsky.social
Scientist studying molecules using mass spectrometry. Also coding sometimes.
ORCID: 0000-0002-5865-8994
ORCID: 0000-0002-5865-8994
Adjective of the day: softwareengineeringy.
November 18, 2025 at 2:38 PM
Adjective of the day: softwareengineeringy.
Stuck in Gare de Lyon, as the TGV that was supposed to leave over an hour ago, is still on the platform. However, the station's restaurant did not disappoint!
November 18, 2025 at 2:19 PM
Stuck in Gare de Lyon, as the TGV that was supposed to leave over an hour ago, is still on the platform. However, the station's restaurant did not disappoint!
Brief observations:
ASMS Meeting: 🍺→ 👩👩👦👦👨👩👦👦👨👨👧👧👩👩👦👦, always questions/proposals.
HUPO General Assembly of Members: No 🍺→ 🪑🪑🙍🪑, no questions.
ASMS Meeting: 🍺→ 👩👩👦👦👨👩👦👦👨👨👧👧👩👩👦👦, always questions/proposals.
HUPO General Assembly of Members: No 🍺→ 🪑🪑🙍🪑, no questions.
November 12, 2025 at 10:17 PM
Brief observations:
ASMS Meeting: 🍺→ 👩👩👦👦👨👩👦👦👨👨👧👧👩👩👦👦, always questions/proposals.
HUPO General Assembly of Members: No 🍺→ 🪑🪑🙍🪑, no questions.
ASMS Meeting: 🍺→ 👩👩👦👦👨👩👦👦👨👨👧👧👩👩👦👦, always questions/proposals.
HUPO General Assembly of Members: No 🍺→ 🪑🪑🙍🪑, no questions.
"Biomarker studies are the greatest reproducibility crisis in science" (M. Uhlén, 2025).
November 11, 2025 at 6:02 PM
"Biomarker studies are the greatest reproducibility crisis in science" (M. Uhlén, 2025).
HUPO-PSI AI-Readiness Working Group launching into orbit from the Bioinformatics Hub @hupo-org.bsky.social! 10... 9... 8...
November 11, 2025 at 3:17 PM
HUPO-PSI AI-Readiness Working Group launching into orbit from the Bioinformatics Hub @hupo-org.bsky.social! 10... 9... 8...
Final days of hacking at @elixir-europe.org #BioHackEU25! Project #5: Bidirectional bridge: GitHub ⇄ bio.tools making slow but steady progress on translating research software metadata between these two platforms. Always a great opportunity to learn new things and get to know new people as well.
✨ We're halfway through #BioHackEU25!
This afternoon, all projects will present their 🎯 goals and challenges they’ve encountered and seek expertise from participants.
Keyword of this year: #Data, #Research, #FAIR and #Metadata
This afternoon, all projects will present their 🎯 goals and challenges they’ve encountered and seek expertise from participants.
Keyword of this year: #Data, #Research, #FAIR and #Metadata
November 6, 2025 at 9:31 AM
Final days of hacking at @elixir-europe.org #BioHackEU25! Project #5: Bidirectional bridge: GitHub ⇄ bio.tools making slow but steady progress on translating research software metadata between these two platforms. Always a great opportunity to learn new things and get to know new people as well.
To my metabolomics friends: what is the closest to a FASTA file for small molecules? Something with PubChem or perhaps ChEBI identifiers in a metadata header followed by a SMILES or some other structural representation?
October 24, 2025 at 7:58 AM
To my metabolomics friends: what is the closest to a FASTA file for small molecules? Something with PubChem or perhaps ChEBI identifiers in a metadata header followed by a SMILES or some other structural representation?
This may be AI generated, but I think the idea is brilliant. If you had trouble to stay awake in history class, this is guaranteed to help you fall asleep: youtu.be/v3vj74019H0?.... Unfortunately, I am too interested in history for this to work on me. Maybe quantum mechanics would work? 🤔
How Napoleon Was Defeated At the Battle of Waterloo 1815 To Fall Asleep To
YouTube video by NightSchool - Boring Lectures for Sleep
youtu.be
October 11, 2025 at 4:28 PM
This may be AI generated, but I think the idea is brilliant. If you had trouble to stay awake in history class, this is guaranteed to help you fall asleep: youtu.be/v3vj74019H0?.... Unfortunately, I am too interested in history for this to work on me. Maybe quantum mechanics would work? 🤔
Shot twice today - once in the left arm (covid) and once in the right (flu). Probably best to bike home while my arms still work...
October 7, 2025 at 3:18 PM
Shot twice today - once in the left arm (covid) and once in the right (flu). Probably best to bike home while my arms still work...
Setting the benchmark for a good morning: back-to-back @ausbiocommons.bsky.social webinars by Veit Schwämmle and @tineclaeys.bsky.social with 07:00 coffee!
September 17, 2025 at 5:15 AM
Setting the benchmark for a good morning: back-to-back @ausbiocommons.bsky.social webinars by Veit Schwämmle and @tineclaeys.bsky.social with 07:00 coffee!
Reposted by Magnus Palmblad
ELIXIR-NL's @magnuspalmblad.bsky.social co-organized the Computational Proteomics Dagstuhl Seminar 2025, uniting experts in ML/AI for proteomics. Breakouts sparked collaborations, manuscripts, and proposals, making this the most productive seminar yet. #Proteomics #Dagstuhl #Collaboration
September 10, 2025 at 12:02 PM
ELIXIR-NL's @magnuspalmblad.bsky.social co-organized the Computational Proteomics Dagstuhl Seminar 2025, uniting experts in ML/AI for proteomics. Breakouts sparked collaborations, manuscripts, and proposals, making this the most productive seminar yet. #Proteomics #Dagstuhl #Collaboration
First results from Olink Reveal: pubs.acs.org/doi/10.1021/.... Ground-truth data in PRIDE (www.ebi.ac.uk/pride/archiv...) and analysis code on OSF (osf.io/as4gv).
September 9, 2025 at 3:49 PM
First results from Olink Reveal: pubs.acs.org/doi/10.1021/.... Ground-truth data in PRIDE (www.ebi.ac.uk/pride/archiv...) and analysis code on OSF (osf.io/as4gv).
Reposted by Magnus Palmblad
We are looking for a 3-year postdoc to work with Daniel Probst, Justin van der Hooft and myself on an exciting project involving federated learning and integrative omics for discovery of new antibiotics from natural products.
Apply here: www.wur.nl/en/vacancy/p...
Please share!
Apply here: www.wur.nl/en/vacancy/p...
Please share!
www.wur.nl
September 8, 2025 at 9:07 AM
We are looking for a 3-year postdoc to work with Daniel Probst, Justin van der Hooft and myself on an exciting project involving federated learning and integrative omics for discovery of new antibiotics from natural products.
Apply here: www.wur.nl/en/vacancy/p...
Please share!
Apply here: www.wur.nl/en/vacancy/p...
Please share!
The timsOmni is one massive Swiss Army knife for top-down proteomics of protein complexes and complex PTMs. Impressive new data presented this morning at the Nordic Conference in Mass Spectrometry and Proteomics in Odense. Ion activation network allows (in theory) 125 types of MS^4 experiments.
September 3, 2025 at 7:28 AM
The timsOmni is one massive Swiss Army knife for top-down proteomics of protein complexes and complex PTMs. Impressive new data presented this morning at the Nordic Conference in Mass Spectrometry and Proteomics in Odense. Ion activation network allows (in theory) 125 types of MS^4 experiments.
Reposted by Magnus Palmblad
Looking forward to a week of productive discussions on Computational Proteomics at Schloss Dagstuhl! Has been a fun meeting to plan with @magnuspalmblad.bsky.social and Mathias Wilhelm
August 24, 2025 at 1:14 PM
Looking forward to a week of productive discussions on Computational Proteomics at Schloss Dagstuhl! Has been a fun meeting to plan with @magnuspalmblad.bsky.social and Mathias Wilhelm
Just reheated some lemon-ricotta ravioli in the microwave (😮, I know), and the lemon flavor is so much more pronounced that when first boiling them. Is this a known phenomenon, or have I discovered an entirely new field of chemistry?
August 18, 2025 at 3:52 PM
Just reheated some lemon-ricotta ravioli in the microwave (😮, I know), and the lemon flavor is so much more pronounced that when first boiling them. Is this a known phenomenon, or have I discovered an entirely new field of chemistry?
Who said Wikipedia editors lack a sense of humor? How about this little gem: "However, the rocket activity in Sweden did not gain thrust until after ESRO established Esrange in 1964." (from en.wikipedia.org/wiki/Esrange).
Esrange - Wikipedia
en.wikipedia.org
August 9, 2025 at 10:01 AM
Who said Wikipedia editors lack a sense of humor? How about this little gem: "However, the rocket activity in Sweden did not gain thrust until after ESRO established Esrange in 1964." (from en.wikipedia.org/wiki/Esrange).
Does anyone have experience with a sensitive (LLOQ ~1 pg/mL) and quantitative assay for (human) IL-10?
August 4, 2025 at 9:19 AM
Does anyone have experience with a sensitive (LLOQ ~1 pg/mL) and quantitative assay for (human) IL-10?
Reposted by Magnus Palmblad
🍺🎉 Happy International Beer Day! 🎉🍺
Did you know that beer isn't just foam and fun — it's also packed with fascinating lipids that play a surprising role in flavour, and even your health? 🤯
👉 Read about one of these lipids in our Lipid of the Month - lipidmaps.org/updates/lipi...
#BeerScience
Did you know that beer isn't just foam and fun — it's also packed with fascinating lipids that play a surprising role in flavour, and even your health? 🤯
👉 Read about one of these lipids in our Lipid of the Month - lipidmaps.org/updates/lipi...
#BeerScience
LIPID MAPS
LIPID MAPS website provides open-access to a large number of globally used lipidomics resources, including databases, tools and educational materials.
lipidmaps.org
August 1, 2025 at 11:57 AM
🍺🎉 Happy International Beer Day! 🎉🍺
Did you know that beer isn't just foam and fun — it's also packed with fascinating lipids that play a surprising role in flavour, and even your health? 🤯
👉 Read about one of these lipids in our Lipid of the Month - lipidmaps.org/updates/lipi...
#BeerScience
Did you know that beer isn't just foam and fun — it's also packed with fascinating lipids that play a surprising role in flavour, and even your health? 🤯
👉 Read about one of these lipids in our Lipid of the Month - lipidmaps.org/updates/lipi...
#BeerScience
The Workflomics Project on AI-driven workflow bake-off aimed for the stars to reach the treetops. In the end, we even made it into outer space! Great collaboration with co-PI Anna-Lena Lamprecht, @pratikomics.bsky.social and many others. Here our #spaceselfie: space.crunchlabs.com/selfie/RvYBRmg.
July 9, 2025 at 8:13 PM
The Workflomics Project on AI-driven workflow bake-off aimed for the stars to reach the treetops. In the end, we even made it into outer space! Great collaboration with co-PI Anna-Lena Lamprecht, @pratikomics.bsky.social and many others. Here our #spaceselfie: space.crunchlabs.com/selfie/RvYBRmg.
Reposted by Magnus Palmblad
If you're working on cool chromatin biology, gene regulation, or nuclear regulome science, I want to work with you!! Our "Early Access Program" is officially open. Everything we generate together will be open-sourced with the community.
--> Apply here: forms.gle/cJqtTkRRZU5m... <--
11/?
--> Apply here: forms.gle/cJqtTkRRZU5m... <--
11/?
Talus Bio Technology Early Program Application
This is our exclusive sandbox for scientists who want to peer into the regulome before anyone else.
Participants have the option to send samples directly to the Talus Bio lab for regulome profiling o...
forms.gle
July 2, 2025 at 4:01 PM
If you're working on cool chromatin biology, gene regulation, or nuclear regulome science, I want to work with you!! Our "Early Access Program" is officially open. Everything we generate together will be open-sourced with the community.
--> Apply here: forms.gle/cJqtTkRRZU5m... <--
11/?
--> Apply here: forms.gle/cJqtTkRRZU5m... <--
11/?
Much appreciated guilt tripping/roasting for being a no-show at a meeting I forgot that I registered for. Mea culpa! But glad to see the sandwiches got eaten in any case:
June 26, 2025 at 12:58 PM
Much appreciated guilt tripping/roasting for being a no-show at a meeting I forgot that I registered for. Mea culpa! But glad to see the sandwiches got eaten in any case:
Reposted by Magnus Palmblad
📣 ELIXIR has published a position paper on the importance of #OpenData infrastructure for 🌍 European competitiveness in life sciences.
Read the news 👉 https://loom.ly/22XW72k
#ResearchInfrastructure #Science4EU
Read the news 👉 https://loom.ly/22XW72k
#ResearchInfrastructure #Science4EU
June 24, 2025 at 9:01 AM
📣 ELIXIR has published a position paper on the importance of #OpenData infrastructure for 🌍 European competitiveness in life sciences.
Read the news 👉 https://loom.ly/22XW72k
#ResearchInfrastructure #Science4EU
Read the news 👉 https://loom.ly/22XW72k
#ResearchInfrastructure #Science4EU