Joe Zackular
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joeyzacks.bsky.social
Joe Zackular
@joeyzacks.bsky.social
Assistant Prof at UPenn & Children’s Hospital of Philadelphia

Co-Director of Center for Microbial Medicine (https://tinyurl.com/2xve6jfp) at CHOP

We study host-pathogen interactions, C. diff, Enterococcus, gut microbiota, mRNA vaccines.

zackularlab.org
Pinned
Registration is now open for @keystonesymposia.bsky.social "Beyond #Antibiotics: Emerging Strategies Combating #BacterialInfection." Deadline for scholarships and abstract selected short talks is Jan 7! Join us this May for an amazing meeting! keysym.us/KSBeyondAntibiotics26 #KSBeyondAntibiotics26
Beyond Antibiotics: Emerging Strategies for Combating Bacterial Infection | Keystone Symposia
Join us at the Keystone Symposia on Beyond Antibiotics: Emerging Strategies for Combating Bacterial Infection, May 2026, in Breckenridge, with field leaders!
keysym.us
Reposted by Joe Zackular
Excited to share my publication, showing that co-residing bacteria in the gut alters population heterogeneity in C. difficile. Thank you to my co-author, Jilarie Santos-Santiago, and our collaborative team from the labs of @joeyzacks.bsky.social and @ritatamayo.bsky.social
doi.org/10.1128/jb.0...
Enterococcus faecalis modulates phase variation in Clostridioides difficile | Journal of Bacteriology
Clostridioides difficile is an enteric pathogen with critical implications for public health. The microbial ecosystem in which C. difficile resides shapes the behavior and fitness of C. difficile; however, the mechanisms underlying these interactions are not well defined. Here, we demonstrate that Enterococcus faecalis, an opportunistic pathogen known to co-colonize the gut with C. difficile, influences phase variation and downstream growth phenotypes in C. difficile. This phenomenon represents a new paradigm by which co-residing bacteria can modulate phase variation dynamics in C. difficile or other enteric pathogens. Understanding factors that influence C. difficile behavior may elucidate new therapeutic strategies, especially in complex polymicrobial infections.
journals.asm.org
January 5, 2026 at 7:38 PM
Reposted by Joe Zackular
⏰ Deadline Jan 7 (11:59 pm MST) to submit a short talk abstract or apply for a scholarship for the Keystone Symposium Beyond Antibiotics. Hear from @joeyzacks.bsky.social, @maribyndloss.bsky.social: youtu.be/8Ppjx-MnvxA

keysym.us/KSBeyondAnti... @kimingeneva.bsky.social & @dariavantyne.bsky.social
KSQA: Drs. Joseph P. Zackular & Mariana X. Byndloss (Beyond Antibiotics)
YouTube video by KeystoneSymposia
youtu.be
January 5, 2026 at 5:35 PM
Really happy to have this study led by @ashleyweiss.bsky.social and Jilarie Santos-Santiago published in the Journal of Bacteriology (@asm.org) over the holiday break!! Always awesome to team up with the amazing @ritatamayo.bsky.social lab! #Cdiff #enterococci

journals.asm.org/doi/10.1128/...
January 5, 2026 at 2:26 PM
Reposted by Joe Zackular
Happy New Year, all! Reminder that the deadline for abstract selected talks is Jan 7th for @keystonesymposia.bsky.social meeting "Beyond Antibiotics: Emerging Strategies Combating Bacterial Infection." Register today and join us in Breckenridge!! It is going to be an awesome meeting!
January 1, 2026 at 8:36 PM
Reposted by Joe Zackular
🦠 folks, amplifying this. Joe has done amazing work with and for the microbiology community. If you're able, please kick in a few bucks.
January 2, 2026 at 12:45 AM
Reposted by Joe Zackular
I know many of you know Joe James (of Binning Singletons)

Joe and his family had a terrible tragedy occur on Christmas. If you can give, this is a good family to help out

gofund.me/5cbfe22fe
Donate to Honoring Sarah James Through Education, organized by Joe James
Honoring Sarah James & Supporting Her Children’s Future On Christmas, our com… Joe James needs your support for Honoring Sarah James Through Education
gofund.me
January 1, 2026 at 10:05 PM
Happy New Year, all! Reminder that the deadline for abstract selected talks is Jan 7th for @keystonesymposia.bsky.social meeting "Beyond Antibiotics: Emerging Strategies Combating Bacterial Infection." Register today and join us in Breckenridge!! It is going to be an awesome meeting!
January 1, 2026 at 8:36 PM
Reposted by Joe Zackular
Friday we lost a brilliant mind, colleague, and friend to her battle with pancreatic cancer. Those who knew her will remember Helene Andrews-Polymenis for her warmth, generosity and leadership. She will be missed by many. RIP
December 23, 2025 at 8:36 AM
Reposted by Joe Zackular
I feel so sad. The world has lost an amazing person.
Helene was so giving to others about her battle, and went through to make it into maybe the top 1% of survivors of pancreatic cancer, before succumbing Dec 19, 2025 all while losing her father to it. She supported @letswinpc.org and the family asks for you to consider supporting them as well.💔
Pancreatic cancer survivor Helene Andrews-Polymenis and Dr. John Chabot discuss strategies for preparing for a Whipple procedure.
December 23, 2025 at 5:10 AM
Reposted by Joe Zackular
Helene was so giving to others about her battle, and went through to make it into maybe the top 1% of survivors of pancreatic cancer, before succumbing Dec 19, 2025 all while losing her father to it. She supported @letswinpc.org and the family asks for you to consider supporting them as well.💔
December 22, 2025 at 8:28 PM
Reposted by Joe Zackular
BREAKING: RFKJr directs that the US instantly stop recommending all vaccinations for children. www.washingtonpost.com/health/2025/...
Under RFK Jr., U.S. plans to stop recommending most vaccines, defer to doctors
The plan, which is not finalized, suggests children get fewer shots and shifts to a model telling parents to consult doctors to make their own vaccine choices.
www.washingtonpost.com
December 19, 2025 at 10:32 PM
Reposted by Joe Zackular
It's time for the 2025 Gibbons Lab Research Roundup!

Yeehaw! 🤠 @isbscience.org

In these dark times, let the joy of scientific discovery and trainee success be your balm ❤️‍🩹

🧵...
December 19, 2025 at 12:06 AM
Reposted by Joe Zackular
Two pieces of fun news:

1. We've launched a new website for our lab: www.brysonlab.org

2. With some new funding, we are recruiting for new postdocs and graduate students. The projects build upon our previous studies of antigen presentation and phagosome biology and go into new exciting dimensions!
The Bryson Lab | Vaccine Development & Research at MIT
Developing effective accessible vaccines to end tuberculosis worldwide. Combining immunoengineering, molecular microbiology & systems biology at MIT.
www.brysonlab.org
December 18, 2025 at 6:29 PM
Reposted by Joe Zackular
🧵Enterococcus faecalis is not just an extracellular organism. 🧵 A growing body of work shows it can survive + REPLICATE inside host cells, and that intracellular life may seed persistence, dissemination, and reinfection. 1/n #MMBR @asm.org journals.asm.org/doi/10.1128/...
Enterococcus faecalis: an overlooked cell invader | Microbiology and Molecular Biology Reviews
SUMMARYEnterococcus faecalis and Enterococcus faecium are human pathobionts that exhibit a dual lifestyle as commensal and pathogenic bacteria. The pathogenic lifestyle is associated with specific conditions involving host susceptibility and intestinal ...
journals.asm.org
December 18, 2025 at 9:19 AM
Reposted by Joe Zackular
If you missed the 2025 @isbscience.org Virtual Microbiome Symposium (theme: how microbial metabolites influence the brain, the immune system, & metabolism), the videos of the talks and the panel discussion are now available here:

youtube.com/playlist?lis...

Thanks to all who helped make it happen!
2025 ISB Microbiome Symposium - YouTube
The 2025 ISB Microbiome Symposium was a virtual scientific event hosted by the Institute for Systems Biology (ISB) on December 12, 2025. The symposium brough...
youtube.com
December 17, 2025 at 4:34 PM
Reposted by Joe Zackular
Interesting new paper by @kimingeneva.bsky.social and colleagues

'Enterococcus faecalis persists and replicates intracellularly within neutrophils'

journals.asm.org/doi/10.1128/...
Enterococcus faecalis persists and replicates intracellularly within neutrophils | Infection and Immunity
Chronic wound infection represents a major global public health concern, impacting both healthcare costs and patient quality of life (1, 2). Enterococcus faecalis is a Gram-positive opportunistic path...
journals.asm.org
December 17, 2025 at 10:19 AM
Reposted by Joe Zackular
🤩 Long ago in 2021, Irina Afonina saw E. faecalis prophage tail fibers co-purify with membrane vesicles, but we didn't know their fxn: pmc.ncbi.nlm.nih.gov/articles/PMC.... In this new preprint, Mike Gilmore and colleagues show us what the tail fibers (aka efagins) actually do! Super cool work. 🤩
December 16, 2025 at 12:32 PM
Reposted by Joe Zackular
👇
NIGMS R35 Maximizing Investigator's Research Award (MIRA) for Outstanding Investigators new NOFO is available!!
Submission dates starting in January 2026 through May 2028.
See link below: simpler.grants.gov/opportunity/...
December 15, 2025 at 8:10 PM
Reposted by Joe Zackular
New PhD project @imibirmingham.bsky.social, supervision by @drjorhodes.com and myself, now open!

'Multi-omic surveillance of microbial dynamics in river and flood-impacted environments: implications for public health in a changing climate'

www.findaphd.com/phds/project...

Deadline 9 Jan 2026!
Multi-omic surveillance of microbial dynamics in river and flood-impacted environments: implications for public health in a changing climate at University of Birmingham on FindAPhD.com
PhD Project - Multi-omic surveillance of microbial dynamics in river and flood-impacted environments: implications for public health in a changing climate at University of Birmingham, listed on FindAP...
www.findaphd.com
December 12, 2025 at 4:48 PM
Reposted by Joe Zackular
“Today is a defining moment for our country,” Michael Osterholm, a public health expert at the University of Minnesota, said. “We can no longer trust federal health authorities when it comes to vaccines.”

www.nytimes.com/2025/12/05/h...
Panel Votes to Stop Recommending Hepatitis B Shots at Birth for Most Newborns
www.nytimes.com
December 6, 2025 at 1:01 AM
Reposted by Joe Zackular
This is extraordinary. Prasad's memo was something else, but to have 12 former FDA commissioners get together so quickly and say what a threat it is...just wow. www.nejm.org/doi/full/10.... #medsky #vaccine #fda
A Threat to Evidence-Based Vaccine Policy and Public Health Security at the FDA | NEJM
Twelve former commissioners of the FDA express concern that the agency’s recent moves will undermine a regulatory model designed to ensure vaccine safety, effectiveness, and availability.
www.nejm.org
December 3, 2025 at 10:44 PM
Reposted by Joe Zackular
A federal vaccine advisory committee is expected to discuss whether newborns should still get the hepatitis B vaccine — the first shot found to prevent cancer.
What to know about the hepatitis B shot — and why Trump officials are targeting it
A federal vaccine advisory committee this week is expected to discuss whether newborns should still get the hepatitis B vaccine — the first shot found to prevent cancer.
bit.ly
December 4, 2025 at 10:00 AM
Reposted by Joe Zackular
The last 12 FDA commissioners did not mince their words (to the extent that one can do that in the context of an academic medical journal):
www.nejm.org/doi/full/10....
A Threat to Evidence-Based Vaccine Policy and Public Health Security at the FDA | NEJM
Twelve former commissioners of the FDA express concern that the agency’s recent moves will undermine a regulatory model designed to ensure vaccine safety, effectiveness, and availability.
www.nejm.org
December 3, 2025 at 10:21 PM
Reposted by Joe Zackular
Registration is now open for @keystonesymposia.bsky.social "Beyond #Antibiotics: Emerging Strategies Combating #BacterialInfection." Deadline for scholarships and abstract selected short talks is Jan 7! Join us this May for an amazing meeting! keysym.us/KSBeyondAntibiotics26 #KSBeyondAntibiotics26
Beyond Antibiotics: Emerging Strategies for Combating Bacterial Infection | Keystone Symposia
Join us at the Keystone Symposia on Beyond Antibiotics: Emerging Strategies for Combating Bacterial Infection, May 2026, in Breckenridge, with field leaders!
keysym.us
November 19, 2025 at 5:37 PM
Reposted by Joe Zackular
Exciting new preprint from @amibhatt.bsky.social group

'A conserved sRNA regulates mucin adhesion and gut colonization across the Enterococcaceae'

www.biorxiv.org/content/10.1...
A conserved sRNA regulates mucin adhesion and gut colonization across the Enterococcaceae
Enterococci, particularly E. faecalis , can survive in diverse settings within and outside human hosts. The capacity of E. faecalis to colonize these locations relies on its ability to adapt by alteri...
www.biorxiv.org
November 26, 2025 at 2:44 PM