Ben Parker Lab
@benparkerlab.bsky.social
Scientist @UniMelb 🇦🇺 focusing on #proteomics, signaling and metabolism. Loves 🏄♂️⛷️⛰️
Reposted by Ben Parker Lab
Two weeks to go before the abstract deadline (July 18th)! Looking forward to seeing you all there!
Australia’s First Ubiquitin Summit is here! 🥳
📍Lorne, Victoria | 🗓️ 20–23 November 2025
Join us on the scenic coastline of Lorne for 4 days of cutting-edge ubiquitin science, featuring a fantastic lineup of international speakers covering all corners of the Ub world—from mechanisms to therapeutics
📍Lorne, Victoria | 🗓️ 20–23 November 2025
Join us on the scenic coastline of Lorne for 4 days of cutting-edge ubiquitin science, featuring a fantastic lineup of international speakers covering all corners of the Ub world—from mechanisms to therapeutics
July 4, 2025 at 1:42 PM
Two weeks to go before the abstract deadline (July 18th)! Looking forward to seeing you all there!
Are you interested in #proteomics and #skeletalmuscle? It can be a real pain to get deep reproducible coverage. Check out our review with @adeshmukh.bsky.social We analyse some considerations including current limitations and how to potentially overcome them #myoblue @unimelbcmr.bsky.social
Skeletal muscle proteomics: considerations and opportunities
npj Metabolic Health and Disease - Skeletal muscle proteomics: considerations and opportunities
www.nature.com
July 3, 2025 at 6:18 PM
Are you interested in #proteomics and #skeletalmuscle? It can be a real pain to get deep reproducible coverage. Check out our review with @adeshmukh.bsky.social We analyse some considerations including current limitations and how to potentially overcome them #myoblue @unimelbcmr.bsky.social
Reposted by Ben Parker Lab
👩💻 We’re hiring! Lê Cao Lab at Uni Melbourne @mig-unimelb.bsky.social needs an R dev to power the next-gen of mixOmics 🚀
Love #RStats, #Bioconductor & multi-omics? Help expand mixOmics, run workshops & publish cutting-edge methods.
Apply: unimelb.wd105.myworkdayjobs.com/en-US/UoM_Ex...
Love #RStats, #Bioconductor & multi-omics? Help expand mixOmics, run workshops & publish cutting-edge methods.
Apply: unimelb.wd105.myworkdayjobs.com/en-US/UoM_Ex...
June 23, 2025 at 10:20 PM
👩💻 We’re hiring! Lê Cao Lab at Uni Melbourne @mig-unimelb.bsky.social needs an R dev to power the next-gen of mixOmics 🚀
Love #RStats, #Bioconductor & multi-omics? Help expand mixOmics, run workshops & publish cutting-edge methods.
Apply: unimelb.wd105.myworkdayjobs.com/en-US/UoM_Ex...
Love #RStats, #Bioconductor & multi-omics? Help expand mixOmics, run workshops & publish cutting-edge methods.
Apply: unimelb.wd105.myworkdayjobs.com/en-US/UoM_Ex...
Reposted by Ben Parker Lab
🚨 Has PRIDE helped your research?
Take 15 mins to tell funders why open data matters!
📊 Fill out the EMBL-EBI 2025 survey 👉
www.surveymonkey.com/r/QGFMBH8?ch...
Your feedback helps keep PRIDE open, FAIR & impactful.
🙏 Please share!
#FAIR #OpenData #Proteomics #MassSpectrometry #PRIDE
Take 15 mins to tell funders why open data matters!
📊 Fill out the EMBL-EBI 2025 survey 👉
www.surveymonkey.com/r/QGFMBH8?ch...
Your feedback helps keep PRIDE open, FAIR & impactful.
🙏 Please share!
#FAIR #OpenData #Proteomics #MassSpectrometry #PRIDE
LinkedIn
This link will take you to a page that’s not on LinkedIn
lnkd.in
June 18, 2025 at 6:02 AM
🚨 Has PRIDE helped your research?
Take 15 mins to tell funders why open data matters!
📊 Fill out the EMBL-EBI 2025 survey 👉
www.surveymonkey.com/r/QGFMBH8?ch...
Your feedback helps keep PRIDE open, FAIR & impactful.
🙏 Please share!
#FAIR #OpenData #Proteomics #MassSpectrometry #PRIDE
Take 15 mins to tell funders why open data matters!
📊 Fill out the EMBL-EBI 2025 survey 👉
www.surveymonkey.com/r/QGFMBH8?ch...
Your feedback helps keep PRIDE open, FAIR & impactful.
🙏 Please share!
#FAIR #OpenData #Proteomics #MassSpectrometry #PRIDE
Check out our new #proteomic method to site-specifically quantify UFMylation! We applied the approach to look at human skeletal muscle biopsies from #ALS. A great collaboration with CellSignalTechnology and many others...
A little summary below... www.cell.com/cell-reports...
A little summary below... www.cell.com/cell-reports...
Site-specific quantification of the in vivo UFMylome reveals myosin modification in ALS
UFMylation is the post-translational modification of Ubiquitin Fold Modifier1 (UFM1)
applied to substrate proteins. Blazev et al. develop an antibody-based enrichment
approach followed by LC-MS/MS to ...
www.cell.com
May 11, 2025 at 8:05 PM
Check out our new #proteomic method to site-specifically quantify UFMylation! We applied the approach to look at human skeletal muscle biopsies from #ALS. A great collaboration with CellSignalTechnology and many others...
A little summary below... www.cell.com/cell-reports...
A little summary below... www.cell.com/cell-reports...
Reposted by Ben Parker Lab
Exciting news: We have released #FragPipe 23, and it's one of our biggest updates ever. Windows installer, support for TMT on Astral and timsTOF, TMT35, PTM site reports for DIA, improved Astral data handling in #MSFragger, improved diaTracer for diaPASEF data, better Skyline integration, and more!
May 5, 2025 at 4:06 AM
Exciting news: We have released #FragPipe 23, and it's one of our biggest updates ever. Windows installer, support for TMT on Astral and timsTOF, TMT35, PTM site reports for DIA, improved Astral data handling in #MSFragger, improved diaTracer for diaPASEF data, better Skyline integration, and more!
Reposted by Ben Parker Lab
Our newest paper is out in Science! This riddle took 5 years to solve. Genome annotation and AI missed it. Manual inspection and serendipity still have advantages for cracking nature's secrets! With @science.org @evolutionvu.bsky.social @rokaslab.bsky.social
www.science.org/doi/10.1126/...
www.science.org/doi/10.1126/...
Running a genetic stop sign accelerates oxygen metabolism and energy production in horses
Horses are among nature’s greatest athletes, yet the ancestral molecular adaptations fueling their energy demands are poorly understood. Within a clinically important pathway regulating redox and meta...
www.science.org
March 28, 2025 at 12:27 AM
Our newest paper is out in Science! This riddle took 5 years to solve. Genome annotation and AI missed it. Manual inspection and serendipity still have advantages for cracking nature's secrets! With @science.org @evolutionvu.bsky.social @rokaslab.bsky.social
www.science.org/doi/10.1126/...
www.science.org/doi/10.1126/...
Hi #proteomics people, I'm hoping someone can help interpret these results. We have generated .fasta from RNAseq. We are testing the effects of different db size on min score cut-off @ 1% FDR. Hypothesis: as db increase, score increases. We don't see this with multiple algorithms and appears random.
March 21, 2025 at 3:15 AM
Hi #proteomics people, I'm hoping someone can help interpret these results. We have generated .fasta from RNAseq. We are testing the effects of different db size on min score cut-off @ 1% FDR. Hypothesis: as db increase, score increases. We don't see this with multiple algorithms and appears random.
Reposted by Ben Parker Lab
Amazing location and science!!!!
⏰ A reminder that poster abstract submissions close this Friday 14th March. Don't miss this last chance to present your research at AUS-oMicS!
www.ausomics.com/abstracts
#TeamMassSpec #massspectrometry #massspec
www.ausomics.com/abstracts
#TeamMassSpec #massspectrometry #massspec
March 10, 2025 at 9:49 AM
Amazing location and science!!!!
Reposted by Ben Parker Lab
⏰ A reminder that poster abstract submissions close this Friday 14th March. Don't miss this last chance to present your research at AUS-oMicS!
www.ausomics.com/abstracts
#TeamMassSpec #massspectrometry #massspec
www.ausomics.com/abstracts
#TeamMassSpec #massspectrometry #massspec
March 9, 2025 at 10:59 PM
⏰ A reminder that poster abstract submissions close this Friday 14th March. Don't miss this last chance to present your research at AUS-oMicS!
www.ausomics.com/abstracts
#TeamMassSpec #massspectrometry #massspec
www.ausomics.com/abstracts
#TeamMassSpec #massspectrometry #massspec