Website: https://steglelab.org/
Read the full article: ellis.eu/news/ellis-s...
Read the full article: ellis.eu/news/ellis-s...
During her molecular biology studies, Gesa developed an interest in applying mathematics and ML to understand complex biological systems. Her PhD research will focus on inferring GRNs by integrating insights from population genetics and genetic perturbation data.
During her molecular biology studies, Gesa developed an interest in applying mathematics and ML to understand complex biological systems. Her PhD research will focus on inferring GRNs by integrating insights from population genetics and genetic perturbation data.
Steffi joins us as a PhD student after completing her Master’s at Heidelberg University. She will explore gene regulation and cell differentiation using organoid models and is excited to analyze these complex datasets and develop ML methods.
Steffi joins us as a PhD student after completing her Master’s at Heidelberg University. She will explore gene regulation and cell differentiation using organoid models and is excited to analyze these complex datasets and develop ML methods.
You might’ve found it challenging to tailor them to your specific use cases - not anymore!
Introducing MOFA-FLEX: a flexible, modular factor analysis framework designed for customizable modeling across diverse multi-omics data scenarios. 1/n
You might’ve found it challenging to tailor them to your specific use cases - not anymore!
Introducing MOFA-FLEX: a flexible, modular factor analysis framework designed for customizable modeling across diverse multi-omics data scenarios. 1/n
Led by EMBL’s Oliver Stegle and Anna Kreshuk, the workshop united researchers and AI experts to explore how advanced computational approaches are shaping the future of life sciences.
#ai
Led by EMBL’s Oliver Stegle and Anna Kreshuk, the workshop united researchers and AI experts to explore how advanced computational approaches are shaping the future of life sciences.
#ai
We’ll generate high-throughput multi-modal CRISPR data on ASD risk genes in 🧠 organoids & assembloids, and build an ML model of gene regulation dynamics to analyze the data and enable future in silico experiments.
👉TACTICS: Thalamocortical Assembloids and Computational Tools for Investigating Cellular Signatures in #Autism.
🧠How do autism-linked mutations disrupt early brain development? @moritzmall.bsky.social @steglelab.bsky.social
@dkfz.bsky.social
We’ll generate high-throughput multi-modal CRISPR data on ASD risk genes in 🧠 organoids & assembloids, and build an ML model of gene regulation dynamics to analyze the data and enable future in silico experiments.
SDR-seq makes it possible; an experimental method connecting coding and non-coding variants to expression in single cells.
Proud to have contributed a custom FASTQ-processing tool to this great collaborative project.
Known as SDR-seq, the tool has unprecedented scale, precision, and speed to characterise variants and link them to functions and disease.
www.embl.org/news/science...
SDR-seq makes it possible; an experimental method connecting coding and non-coding variants to expression in single cells.
Proud to have contributed a custom FASTQ-processing tool to this great collaborative project.
📅 October 16, 2:30pm-4:30pm
📍 Poster 1007T
📅 October 16, 2:30pm-4:30pm
📍 Poster 1007T
A fantastic opportunity to showcase and discover innovative data frameworks for #singlecell analysis, and to meet the developers behind the scverse ecosystem. Looking forward to connecting with the community!
Register now! 👇
We're excited to announce that registration and the call for abstracts are officially open for the scverse Conference 2025!
Details in thread!
🧵 1/3
A fantastic opportunity to showcase and discover innovative data frameworks for #singlecell analysis, and to meet the developers behind the scverse ecosystem. Looking forward to connecting with the community!
Register now! 👇
Check out the publication for the nuts and bolts of 🍫-G2P: doi.org/10.1038/s415...
Clever experimental design by @breinigmarco.bsky.social hijacking Visium and elegant analysis by @lomakinai.bsky.social and @elihei.bsky.social
www.nature.com/articles/s41...
Check out the publication for the nuts and bolts of 🍫-G2P: doi.org/10.1038/s415...
You'll be working on multi-omics factorization models for personalized medicine, co-supervised by @junyanlu.bsky.social.
👉 Project: www.helmholtz.de/assets/hidss...
✍️ Apply: hidss4health.de/application
You'll be working on multi-omics factorization models for personalized medicine, co-supervised by @junyanlu.bsky.social.
👉 Project: www.helmholtz.de/assets/hidss...
✍️ Apply: hidss4health.de/application
💡 Funding from the Hector Foundation is dedicated to attracting interdisciplinary talent, boosting infrastructure, training, & innovation.
www.embl.org/news/connect...
💡 Funding from the Hector Foundation is dedicated to attracting interdisciplinary talent, boosting infrastructure, training, & innovation.
www.embl.org/news/connect...
has an Independent faculty position. Fantastic place to set up your lab –great package: core funding, fantastic Ph.D. students, cutting edge core facilities & great colleagues. Closing date Sept 19th
embl.wd103.myworkdayjobs.com/en-US/EMBL/j...
has an Independent faculty position. Fantastic place to set up your lab –great package: core funding, fantastic Ph.D. students, cutting edge core facilities & great colleagues. Closing date Sept 19th
embl.wd103.myworkdayjobs.com/en-US/EMBL/j...
More details below. 👇
More details below. 👇
EurIPS is a community-organized conference where you can present accepted NeurIPS 2025 papers, endorsed by @neuripsconf.bsky.social and @nordicair.bsky.social and is co-developed by @ellis.eu
eurips.cc
EurIPS is a community-organized conference where you can present accepted NeurIPS 2025 papers, endorsed by @neuripsconf.bsky.social and @nordicair.bsky.social and is co-developed by @ellis.eu
eurips.cc
Hakime shared reflections on the recently concluded Health Privacy Challenge and also organized a follow-up workshop. 🛡️
Hakime shared reflections on the recently concluded Health Privacy Challenge and also organized a follow-up workshop. 🛡️
embl.wd103.myworkdayjobs.com/de-DE/EMBL/d...
Join a young and passionate team at Heidelberg University to advance bioinformatics software that drive biological discovery.
Learn more & apply 👉 shorturl.at/GCpg7
Join a young and passionate team at Heidelberg University to advance bioinformatics software that drive biological discovery.
Learn more & apply 👉 shorturl.at/GCpg7
The European Commission decided to extend the duration of our Lighthouse on Secure and Safe AI. We will now run for an additional 12 months until August 2026.
Find more details in the official press release:
elsa-ai.eu/official-ext...
Congratulations to the network!
The European Commission decided to extend the duration of our Lighthouse on Secure and Safe AI. We will now run for an additional 12 months until August 2026.
Find more details in the official press release:
elsa-ai.eu/official-ext...
Congratulations to the network!
This release includes a streamlined API aligned with scverse standards, updated vignettes, and a new one on pseudotime enrichment analysis 👇
decoupler.readthedocs.io/en/latest/
This release includes a streamlined API aligned with scverse standards, updated vignettes, and a new one on pseudotime enrichment analysis 👇
decoupler.readthedocs.io/en/latest/
Engineers, physicists, coders & more — join EMBL labs across Europe to build cutting-edge tools for life sciences.
Apply now: www.embl.org/about/info/s...
#STEM #LifeSciences #Internship #Research
Two exciting posters on rare variant genetics — both on Wednesday at 16:00. Details below 👇
#HelmholtzAI #Genomics #RareVariants #DeepRVAT #HAICON
Two exciting posters on rare variant genetics — both on Wednesday at 16:00. Details below 👇
#HelmholtzAI #Genomics #RareVariants #DeepRVAT #HAICON
@brianfclarke.bsky.social is hiring a PhD student to develop deep learning methods for rare variant genetics @dkfz.bsky.social in Heidelberg. 🎯
⏳ 1 week left to apply: jobs.dkfz.de/en/jobs/167772
#PhD #Genomics #AI
Want use deep learning to discover genetic disease mechanisms and therapeutic targets? Like the sound of applying Bayesian deep learning, DNA language models and federated learning to this exciting problem? Then this position in our group is for you!
@brianfclarke.bsky.social is hiring a PhD student to develop deep learning methods for rare variant genetics @dkfz.bsky.social in Heidelberg. 🎯
⏳ 1 week left to apply: jobs.dkfz.de/en/jobs/167772
#PhD #Genomics #AI
Apply here: embl.wd103.myworkdayjobs.com/de-DE/EMBL/j...
Please share 🙏
Apply here: embl.wd103.myworkdayjobs.com/de-DE/EMBL/j...
Please share 🙏