Felipe Muñoz-Guzmán
pipemunozg.bsky.social
Felipe Muñoz-Guzmán
@pipemunozg.bsky.social
Fungal researcher interested in molecular evolution and system biology | Co-organizer at @molbiosystems.bsky.social and @smbe-chile2025.bsky.social
Reposted by Felipe Muñoz-Guzmán
🎉🎖️Congratulations to 🌟Gabriel Péréz-Lara🌟 (UNAB, Santiago, Chile), winner of the FEBS Letters #PosterPrize at #MBioSys25, held in Puerto Varas, Chile! 🎉👏👏👏🎊

@molbiosystems.bsky.social
October 30, 2025 at 1:24 PM
Reposted by Felipe Muñoz-Guzmán
The SMBE Satellite Meeting in Puerto Varas, Chile, was a resounding success!

The meeting brought together >70 researchers from different continents for 3 days of inspiring science, vibrant discussion, and genuine community building.

Congratulations to the organization!

@smbe-chile2025.bsky.social
October 15, 2025 at 3:50 PM
Reposted by Felipe Muñoz-Guzmán
Meet the organizing committee, who has been hard at work to make the event happen:

Lorena Aguilar-Arnal🇲🇽
Paulo Canessa🇨🇱
‪Maria Ana Duhagon🇺🇾
@selfdz.bsky.social 🇦🇺
@lflarrondo.bsky.social 🇨🇱
@aemonten.bsky.social 🇺🇸
@pipemunozg.bsky.social 🇨🇱
@pstrobl.bsky.social 🇦🇷
Estefanía Tarifeño-Saldivia🇨🇱
March 7, 2025 at 5:41 PM
Reposted by Felipe Muñoz-Guzmán
🚨 Registration for the Molecular Biosystems Conference is now OPEN! 🚨

Join us in southern Chile to discuss cutting-edge research in gene regulation & functional genomics.

📅 Sep 29-Oct 3, 2025
📍 Puerto Varas, Chile
🔗 Register here: molbiosystems.com

Secure your spot now—space is limited!
Molecular Biosystems Conference
Molecular Biosystems Conference
molbiosystems.com
March 7, 2025 at 5:41 PM
Reposted by Felipe Muñoz-Guzmán
Happy to share this JOVE MS, we provide details on live-tracking maltose metabolism activation in yeast using LUC. We used our ❤️Patagonian Sacch. eubayanus to show how activitation proceeds under beer fermentation 🧐 🍺
@ibiochile.bsky.social @pipemunozg.bsky.social

app.jove.com/t/68161/in-viv…
In Vivo Monitoring of Transcriptional Activity During Metabolic Transition Using a Bioluminescent Reporter in Yeast
Read this JoVE article on In Vivo Monitoring of Transcriptional Activity During Metabolic Transition Using a Bioluminescent Reporter in Yeast
https://app.jove.com/t/68161/in-viv…
February 28, 2025 at 2:16 PM
Reposted by Felipe Muñoz-Guzmán
Had a 3-h long meeting yesterday with @pipemunozg.bsky.social to finalize some details for #mbiosys25!

We are almost there —registration opens soon! Follow @molbiosystems.bsky.social for details.

molbiosystems.com
Molecular Biosystems Conference
Molecular Biosystems Conference
molbiosystems.com
February 28, 2025 at 2:59 PM
Reposted by Felipe Muñoz-Guzmán
Happy to present our latest pre-print: GRN_modeler - a user-friendly tool to model (synthetic) gene regulatory networks. We demonstrate its usefulness in designing new families of synthetic oscillators and build a light biosensor. Feedback welcome.
@dmf-unil.bsky.social @fbm-unil.bsky.social
GRN modeler: An Intuitive Tool for Constructing and Evaluating Gene Regulatory Networks and its Applications to Oscillators and a Light Biosensor https://www.biorxiv.org/content/10.1101/2024.12.18.629005v1
January 7, 2025 at 7:38 AM
Reposted by Felipe Muñoz-Guzmán
Environmental microbiome, human fungal pathogens, and antimicrobial resistance
Traditionally, antifungal resistance (AFR) has received much less attention compared with bacterial resistance to antibiotics. However, global changes, pandemics, and emerging new fungal infections have highlighted global health consequences of AFR. The recent report of the World Health Organisation (WHO) has identified fungal priority pathogens, and recognised AFR among the greatest global health threats. This is particularly important given the significant increase in fungal infections linked to climate change and pandemics. Environmental factors play critical roles in AFR and fungal infections, as many clinically relevant fungal pathogens and AFR originate from the environment (mainly soil). In addition, the environment serves as a potential rich source for the discovery of new antifungal agents, including mycoviruses and bacterial probiotics, which hold promise for effective therapies. In this article, we summarise the environmental pathways of AFR development and spread among high priority fungal pathogens, and propose potential mechanisms of AFR development and spread. We identify a research priority list to address key knowledge gaps in our understanding of environmental AFR. Further, we propose an integrated roadmap for predictive risk management of AFR that is critical for effective surveillance and forecasting of public health outcomes under current and future climatic conditions.
www.cell.com
January 11, 2025 at 7:46 PM
Reposted by Felipe Muñoz-Guzmán
I misheard this as “You’re In a Fish”, which sounds decidedly more fun.
January 12, 2025 at 8:08 AM
Reposted by Felipe Muñoz-Guzmán
Fact checking is not censorship.

It's an essential public service.

Disinformation kills. Period.
January 7, 2025 at 5:58 PM
Reposted by Felipe Muñoz-Guzmán
Our framework explaining why ecological interactions change between contexts is out in Ecology Letters!
A lovely collaboration with @saramitri.bsky.social which provides experimentally-testable links between the physiology and ecology of microbes.
onlinelibrary.wiley.com/doi/10.1111/...
Environment‐Organism Feedbacks Drive Changes in Ecological Interactions
Ecological interactions are central to our understanding of the composition and function of communities, but attempts to use them as a theoretical foundation for experimental ecology have been confou....
onlinelibrary.wiley.com
January 2, 2025 at 10:53 AM
Reposted by Felipe Muñoz-Guzmán
Incredibly excited to share that our manuscript was just published in @nature.com ! What a way to start the new year! 🎉
https://buff.ly/4gyYCzx

We present phylowave, a framework that enables to learn the fitness dynamics of pathogens from phylogenies.

🧵 A thread... 1/n
#IDSky #IDModelling
Learning the fitness dynamics of pathogens from phylogenies - Nature
Phylowave, an innovative phylogenetic approach, can identify the main circulating pathogen lineages with increased fitness and the associated genetic changes, enabling the timely identification of…
buff.ly
January 2, 2025 at 8:03 AM
Reposted by Felipe Muñoz-Guzmán
Excited to report that Joy Bergelson (bergelsonlab.org) and I will be running a brand new GRC conference on the Function of Evolving Systems in the summer of 2026. The 2028 one will be chaired by Mikhail Tikhonov (physics.wustl.edu/people/mikha...) and @asanchezlab.bsky.social! Stay tuned!
Faculty
physics.wustl.edu
December 30, 2024 at 7:43 PM
Reposted by Felipe Muñoz-Guzmán
The post doc who moved to the industry
December 30, 2024 at 8:00 AM
Reposted by Felipe Muñoz-Guzmán
Interesting interview with Michael
Elowitz on some of his early work on synthetic biology.

Also like his discussion of how the “cell as computer” metaphor can both illuminate and mislead.

🐋🌱🦫🦋🧪 #HistSTM #Evobio #Livingmatter
Synthetic Origins
Michael Elowitz on the early years of synthetic biology and the programmability of living cells.
open.substack.com
April 2, 2024 at 3:37 PM
Reposted by Felipe Muñoz-Guzmán
Nematode-Trapping Fungus Arthrobotrys oligospora is Hungry for COQ7 to Alleviate Environmentally Triggered Iron Overload https://www.biorxiv.org/content/10.1101/2024.12.24.630212v1
December 27, 2024 at 10:16 AM
Reposted by Felipe Muñoz-Guzmán
End-of-year read! The work of Melvin Bérard in the @sophiemartinlab.bsky.social is now out in @plosbiology.org.

Proteomic and phosphoproteomic analyses reveal that TORC1 is reactivated by pheromone signaling during sexual reproduction in fission yeast

doi.org/10.1371/jour...
December 23, 2024 at 10:11 AM
Reposted by Felipe Muñoz-Guzmán
We present Gene Regulatory nETwork Analsyis (GRETA), a framework to infer, compare and evaluate gene regulatory networks #GRNs. With it, we have benchmarked multimodal and unimodal GRN inference methods. Check the results here 👇
Paper: doi.org/10.1101/2024.12.20.629764
Code: github.com/saezlab/greta
December 23, 2024 at 8:43 AM
Reposted by Felipe Muñoz-Guzmán
Out today! 🚨 We explore how planetary oxidation ~2.5 billion years ago shaped the puzzling history of metal use in nitrogenase, key to nitrogen fixation! 🌍🔬

www.biorxiv.org/content/10.1...

Congrats, @msobol.bsky.social! #earlylife #paleobiology #evolution
December 19, 2024 at 3:23 AM
Reposted by Felipe Muñoz-Guzmán
The Impact of Selected Lachancea Yeast Strains on the Production Process, Chemical Composition and Aroma Profiles of Beers

Full text: pubmed.ncbi.nlm.nih.gov/39683832/
December 19, 2024 at 7:06 PM
Reposted by Felipe Muñoz-Guzmán
Reminder about our Methods Collection with JoVE on “ Current Methods in Bone Biology and Regeneration ”
app.jove.com/fr/methods-c...

Big discounts on publications fees for ECR!

Abstract submission link: app.jove.com/fr/methods-c...
JoVE | Peer Reviewed Scientific Video Journal - Methods and Protocols
Jove
app.jove.com
December 19, 2024 at 10:55 AM
Reposted by Felipe Muñoz-Guzmán
In other words: no, you can't "easily tell when someone has used an LLM"; and if you think you can enforce a ban with detectors, you're doing damage.
Can AI detection tools intended to uphold academic integrity do more harm than good? This paper aims to show how false positives unfairly target non-native English speakers and unique writing styles (e.g., researchers with autism), sparking anxiety and distrust.

doi.org/10.1080/0361...
December 18, 2024 at 1:11 AM
Reposted by Felipe Muñoz-Guzmán
Excited to share our new study in @ismepublications.bsky.social showing that microbial niche breadth specialisation (being a generalist or a specialist) impacts ecological and evolutionary adaptation following environmental change doi.org/10.1093/isme...
Niche breadth specialization impacts ecological and evolutionary adaptation following environmental change
Abstract. Ecological theory predicts that organismal distribution and abundance depend on the ability to adapt to environmental change. It also predicts th
doi.org
December 17, 2024 at 11:17 AM