José Manuel Robles-Aguilar
@manuroag.bsky.social
manuroag.github.io
AI and Physics to address complex challenges within the biological sciences. 🧬💻
M.Sc. in Statistical Physics at Cinvestav, Mexico City.
(Expected completion in November 2025)
🔍 I am looking for a PhD position.
AI and Physics to address complex challenges within the biological sciences. 🧬💻
M.Sc. in Statistical Physics at Cinvestav, Mexico City.
(Expected completion in November 2025)
🔍 I am looking for a PhD position.
Pinned
Incredible science and collaboration at the 13th Symposium on Structural Proteomics at @humantechnopole.bsky.social this week! 🧬💻🥼
Great talks, great people, great future for the field. Honored to have been a part of it. See you all at the next one!
#StructuralProteomics #MassSpectrometry #Physics
Great talks, great people, great future for the field. Honored to have been a part of it. See you all at the next one!
#StructuralProteomics #MassSpectrometry #Physics
Reposted by José Manuel Robles-Aguilar
In case you're still looking for a gift idea for your PhD students, I made a tutorial on how to sew a tote bag in a fabric poster. It's in french but I'm sure you're all smart enough to get it.
C'est la saison des thèses et vous ne savez pas quoi offrir aux futur·e·s docteur·e·s de votre laboratoire ?
Sachez que vous pouvez recycler leurs posters (textiles) en tote bag et en plus je vous ai fait un tuto !
Sachez que vous pouvez recycler leurs posters (textiles) en tote bag et en plus je vous ai fait un tuto !
November 22, 2025 at 5:41 PM
In case you're still looking for a gift idea for your PhD students, I made a tutorial on how to sew a tote bag in a fabric poster. It's in french but I'm sure you're all smart enough to get it.
Reposted by José Manuel Robles-Aguilar
Check the list of confirmed speakers for the MDDB Conference and apply to be part of this excellent lineup ➡️ mddbr.eu/conference/
Present your work, connect with leading experts from the community, and be part of the discussions shaping the future of MD research!
#MDDB #FAIRdata
Present your work, connect with leading experts from the community, and be part of the discussions shaping the future of MD research!
#MDDB #FAIRdata
November 20, 2025 at 10:43 AM
Check the list of confirmed speakers for the MDDB Conference and apply to be part of this excellent lineup ➡️ mddbr.eu/conference/
Present your work, connect with leading experts from the community, and be part of the discussions shaping the future of MD research!
#MDDB #FAIRdata
Present your work, connect with leading experts from the community, and be part of the discussions shaping the future of MD research!
#MDDB #FAIRdata
Reposted by José Manuel Robles-Aguilar
Struggling to get your head around some fundamental techniques in biochemistry or wondering where to start developing your knowledge? Have a look at our easy-to-follow Beginner's Guide series in The Biochemist Journal for a wide variety of guides! 🧪 buff.ly/ZO4zyU4
November 18, 2025 at 2:03 PM
Struggling to get your head around some fundamental techniques in biochemistry or wondering where to start developing your knowledge? Have a look at our easy-to-follow Beginner's Guide series in The Biochemist Journal for a wide variety of guides! 🧪 buff.ly/ZO4zyU4
Reposted by José Manuel Robles-Aguilar
AI in Protein Design: Hype vs. Reality Explained by David Baker
In this GEN interview, he emphasizes that designing new proteins from scratch is now a reality. Whether AI transforms medicine will require improving our understanding of biology's complexity
In this GEN interview, he emphasizes that designing new proteins from scratch is now a reality. Whether AI transforms medicine will require improving our understanding of biology's complexity
AI in Protein Design: Hype vs. Reality Explained by David Baker
In this GEN interview, Nobel Laureate David Baker, PhD, emphasizes that designing proteins from scratch is reality and unpacks what's needed for AI to transform medicine.
www.genengnews.com
November 2, 2025 at 5:34 PM
AI in Protein Design: Hype vs. Reality Explained by David Baker
In this GEN interview, he emphasizes that designing new proteins from scratch is now a reality. Whether AI transforms medicine will require improving our understanding of biology's complexity
In this GEN interview, he emphasizes that designing new proteins from scratch is now a reality. Whether AI transforms medicine will require improving our understanding of biology's complexity
Reposted by José Manuel Robles-Aguilar
The latest @livecomsjournal.bsky.social tutorial "Molecular Dynamics: From Basics to Application" by Vollmers, Chen et al is out now! doi.org/10.33011/liv...
It includes comprehensive MD tutorials in GROMACS, covering forcefields, thermodynamic ensembles, long-range electrostatics and much more!
It includes comprehensive MD tutorials in GROMACS, covering forcefields, thermodynamic ensembles, long-range electrostatics and much more!
September 9, 2025 at 12:19 PM
The latest @livecomsjournal.bsky.social tutorial "Molecular Dynamics: From Basics to Application" by Vollmers, Chen et al is out now! doi.org/10.33011/liv...
It includes comprehensive MD tutorials in GROMACS, covering forcefields, thermodynamic ensembles, long-range electrostatics and much more!
It includes comprehensive MD tutorials in GROMACS, covering forcefields, thermodynamic ensembles, long-range electrostatics and much more!
Reposted by José Manuel Robles-Aguilar
In the latest @livecomsjournal.bsky.social
perpetual review, Cavender et al overview NMR and crystallographic experimental datasets that can be used to benchmark protein force fields, including best practices for setup and analysis of simulations!:
livecomsjournal.org/index.php/li...
#compchem
perpetual review, Cavender et al overview NMR and crystallographic experimental datasets that can be used to benchmark protein force fields, including best practices for setup and analysis of simulations!:
livecomsjournal.org/index.php/li...
#compchem
October 28, 2025 at 3:36 PM
In the latest @livecomsjournal.bsky.social
perpetual review, Cavender et al overview NMR and crystallographic experimental datasets that can be used to benchmark protein force fields, including best practices for setup and analysis of simulations!:
livecomsjournal.org/index.php/li...
#compchem
perpetual review, Cavender et al overview NMR and crystallographic experimental datasets that can be used to benchmark protein force fields, including best practices for setup and analysis of simulations!:
livecomsjournal.org/index.php/li...
#compchem
Reposted by José Manuel Robles-Aguilar
Physicists have long been enamored with “beautiful” models—but this seems to have changed in high-energy physics. In his new paper, Martin King argues that experimental contexts strongly determine the pursuitworthiness of “ugly models” 👇📃 link.springer.com/article/10.1... #philsci #philphysics #HPS
October 15, 2025 at 3:37 PM
Physicists have long been enamored with “beautiful” models—but this seems to have changed in high-energy physics. In his new paper, Martin King argues that experimental contexts strongly determine the pursuitworthiness of “ugly models” 👇📃 link.springer.com/article/10.1... #philsci #philphysics #HPS
Incredible science and collaboration at the 13th Symposium on Structural Proteomics at @humantechnopole.bsky.social this week! 🧬💻🥼
Great talks, great people, great future for the field. Honored to have been a part of it. See you all at the next one!
#StructuralProteomics #MassSpectrometry #Physics
Great talks, great people, great future for the field. Honored to have been a part of it. See you all at the next one!
#StructuralProteomics #MassSpectrometry #Physics
October 11, 2025 at 7:02 AM
Incredible science and collaboration at the 13th Symposium on Structural Proteomics at @humantechnopole.bsky.social this week! 🧬💻🥼
Great talks, great people, great future for the field. Honored to have been a part of it. See you all at the next one!
#StructuralProteomics #MassSpectrometry #Physics
Great talks, great people, great future for the field. Honored to have been a part of it. See you all at the next one!
#StructuralProteomics #MassSpectrometry #Physics
Reposted by José Manuel Robles-Aguilar
Our IPP Community! 🫶 The past 2 days, we gathered at the annual IPP Symposium to connect with students from @unimainz.bsky.social, Uni Med #Mainz and IMB, share ideas, and get inspired by each other's research.
Apply to our open call via www.imb.de/phd and be a part of next year's event.
Apply to our open call via www.imb.de/phd and be a part of next year's event.
September 26, 2025 at 11:01 AM
Our IPP Community! 🫶 The past 2 days, we gathered at the annual IPP Symposium to connect with students from @unimainz.bsky.social, Uni Med #Mainz and IMB, share ideas, and get inspired by each other's research.
Apply to our open call via www.imb.de/phd and be a part of next year's event.
Apply to our open call via www.imb.de/phd and be a part of next year's event.
Reposted by José Manuel Robles-Aguilar
ICTP-SAIFR: Minicourse on Fundamentals of Biological Physics - Application deadline
📆 Oct 01, 2025
📆 Oct 01, 2025
ICTP – SAIFR » Minicourse on Fundamentals of Biological Physics
Home
www.ictp-saifr.org
September 23, 2025 at 8:00 AM
ICTP-SAIFR: Minicourse on Fundamentals of Biological Physics - Application deadline
📆 Oct 01, 2025
📆 Oct 01, 2025
Reposted by José Manuel Robles-Aguilar
1/ So you’re thinking about applying for an academic job in the UK but don’t know how? This thread will walk you through the essentials.
September 22, 2025 at 1:06 PM
1/ So you’re thinking about applying for an academic job in the UK but don’t know how? This thread will walk you through the essentials.
Reposted by José Manuel Robles-Aguilar
New review on computational design of intrinsically disordered proteins 🖥️🍝 by @giuliotesei.bsky.social @fpesce.bsky.social & 👴
doi.org/10.48550/arX...
doi.org/10.48550/arX...
September 17, 2025 at 4:17 PM
New review on computational design of intrinsically disordered proteins 🖥️🍝 by @giuliotesei.bsky.social @fpesce.bsky.social & 👴
doi.org/10.48550/arX...
doi.org/10.48550/arX...
Reposted by José Manuel Robles-Aguilar
We are gearing up for our interdisciplinary workshop next week! Bringing together both established & early-career researchers, the event will explore the theoretical & methodological challenges of studying behavior across the tree of life! 👇 hiw.kuleuven.be/clps/events/... #philsci #HPbio #evosky
September 16, 2025 at 2:13 PM
We are gearing up for our interdisciplinary workshop next week! Bringing together both established & early-career researchers, the event will explore the theoretical & methodological challenges of studying behavior across the tree of life! 👇 hiw.kuleuven.be/clps/events/... #philsci #HPbio #evosky
Reposted by José Manuel Robles-Aguilar
Now out in #ProteinScience! Work led by the talented 🥳🥳@ananyac2000.bsky.social
onlinelibrary.wiley.com/doi/10.1002/...
onlinelibrary.wiley.com/doi/10.1002/...
September 15, 2025 at 2:46 PM
Now out in #ProteinScience! Work led by the talented 🥳🥳@ananyac2000.bsky.social
onlinelibrary.wiley.com/doi/10.1002/...
onlinelibrary.wiley.com/doi/10.1002/...
Reposted by José Manuel Robles-Aguilar
Reposted by José Manuel Robles-Aguilar
Our Autumn PhD call is OPEN!
20+ fully funded positions across diverse life science disciplines. Explore projects in Cell & Chromosome biology + more 👉 www.vbcphd.at
Apply by 10 Oct 2025
20+ fully funded positions across diverse life science disciplines. Explore projects in Cell & Chromosome biology + more 👉 www.vbcphd.at
Apply by 10 Oct 2025
September 11, 2025 at 2:29 PM
Our Autumn PhD call is OPEN!
20+ fully funded positions across diverse life science disciplines. Explore projects in Cell & Chromosome biology + more 👉 www.vbcphd.at
Apply by 10 Oct 2025
20+ fully funded positions across diverse life science disciplines. Explore projects in Cell & Chromosome biology + more 👉 www.vbcphd.at
Apply by 10 Oct 2025
Reposted by José Manuel Robles-Aguilar
The materials from the “Reproducible Bio-Image Analysis using #Python, #Napari, #Jupyter, and #AI” workshop, run by @haesleinhuepf.bsky.social as part of the @embo.org Course on #LightSheetMicroscopy, are now available #OpenAccess!
📗 scads.github.io/embo-lsm-bia...
📕 zenodo.org/records/1681...
📗 scads.github.io/embo-lsm-bia...
📕 zenodo.org/records/1681...
We teach also #Napari at #LISH25. By @haesleinhuepf.bsky.social highlighting the awesome power of #Jupyter_notebooks for #reproducibility
September 3, 2025 at 8:39 AM
The materials from the “Reproducible Bio-Image Analysis using #Python, #Napari, #Jupyter, and #AI” workshop, run by @haesleinhuepf.bsky.social as part of the @embo.org Course on #LightSheetMicroscopy, are now available #OpenAccess!
📗 scads.github.io/embo-lsm-bia...
📕 zenodo.org/records/1681...
📗 scads.github.io/embo-lsm-bia...
📕 zenodo.org/records/1681...
Reposted by José Manuel Robles-Aguilar
🚨 Save the date! 🚨
The 4th Building Bridges in Computational Biophysics is happening Oct 8, 2025!!
🌍 Virtual 🤝 Networking
📑 Poster session (submit by Sept 26)
Sponsored by @biophysicalsoc.bsky.social and organized by
@vmonje.bsky.social @patsoto-biophys.bsky.social and Cecilia Bores!
The 4th Building Bridges in Computational Biophysics is happening Oct 8, 2025!!
🌍 Virtual 🤝 Networking
📑 Poster session (submit by Sept 26)
Sponsored by @biophysicalsoc.bsky.social and organized by
@vmonje.bsky.social @patsoto-biophys.bsky.social and Cecilia Bores!
September 3, 2025 at 3:23 PM
🚨 Save the date! 🚨
The 4th Building Bridges in Computational Biophysics is happening Oct 8, 2025!!
🌍 Virtual 🤝 Networking
📑 Poster session (submit by Sept 26)
Sponsored by @biophysicalsoc.bsky.social and organized by
@vmonje.bsky.social @patsoto-biophys.bsky.social and Cecilia Bores!
The 4th Building Bridges in Computational Biophysics is happening Oct 8, 2025!!
🌍 Virtual 🤝 Networking
📑 Poster session (submit by Sept 26)
Sponsored by @biophysicalsoc.bsky.social and organized by
@vmonje.bsky.social @patsoto-biophys.bsky.social and Cecilia Bores!
Reposted by José Manuel Robles-Aguilar
We’re looking for fellow nerds to help us make disordered proteins druggable. Love #IDPs, #MD, #NMR, #AI, #DrugDiscovery, or #MassSpec? Let’s talk.
@bindresearch.org is hiring across the board: bindresearch.org/careers/
#compchem #compbio #NMRChat #TeamMassSpec #chemjobs @chemjobber.bsky.social
@bindresearch.org is hiring across the board: bindresearch.org/careers/
#compchem #compbio #NMRChat #TeamMassSpec #chemjobs @chemjobber.bsky.social
Careers
Careers
bindresearch.org
March 24, 2025 at 10:51 AM
We’re looking for fellow nerds to help us make disordered proteins druggable. Love #IDPs, #MD, #NMR, #AI, #DrugDiscovery, or #MassSpec? Let’s talk.
@bindresearch.org is hiring across the board: bindresearch.org/careers/
#compchem #compbio #NMRChat #TeamMassSpec #chemjobs @chemjobber.bsky.social
@bindresearch.org is hiring across the board: bindresearch.org/careers/
#compchem #compbio #NMRChat #TeamMassSpec #chemjobs @chemjobber.bsky.social
Reposted by José Manuel Robles-Aguilar
Launching soon! R for Biochemists 101 begins on Monday 8 September 2025. Don’t miss your chance to boost your data skills and gain confidence in R. Secure your place today🧪 : buff.ly/cyJve1t
September 3, 2025 at 10:00 AM
Launching soon! R for Biochemists 101 begins on Monday 8 September 2025. Don’t miss your chance to boost your data skills and gain confidence in R. Secure your place today🧪 : buff.ly/cyJve1t
Reposted by José Manuel Robles-Aguilar
📢 Recruitment for the EMBL International PhD Programme is officially open!
At EMBL, we train young scientists to become skilled and creative future leaders in academia and other sectors. Join us and get a head start on your career in life sciences!
bit.ly/47mmiFF
At EMBL, we train young scientists to become skilled and creative future leaders in academia and other sectors. Join us and get a head start on your career in life sciences!
bit.ly/47mmiFF
September 1, 2025 at 9:07 AM
📢 Recruitment for the EMBL International PhD Programme is officially open!
At EMBL, we train young scientists to become skilled and creative future leaders in academia and other sectors. Join us and get a head start on your career in life sciences!
bit.ly/47mmiFF
At EMBL, we train young scientists to become skilled and creative future leaders in academia and other sectors. Join us and get a head start on your career in life sciences!
bit.ly/47mmiFF
Reposted by José Manuel Robles-Aguilar
🎓 Applications for Institut Pasteur's PhD programs open Sept 1-Oct 20, 2025 for October 2026 entry.
Apply to up to 4 projects across 6 programs: PPU, PPU-IMAGINE @institutimagine.bsky.social, PPU-@ox.ac.uk, PPU-EID @upcite.bsky.social & more 🧬
Register now ✍️ www.pasteur.fr/en/education...
Apply to up to 4 projects across 6 programs: PPU, PPU-IMAGINE @institutimagine.bsky.social, PPU-@ox.ac.uk, PPU-EID @upcite.bsky.social & more 🧬
Register now ✍️ www.pasteur.fr/en/education...
September 1, 2025 at 9:44 AM
🎓 Applications for Institut Pasteur's PhD programs open Sept 1-Oct 20, 2025 for October 2026 entry.
Apply to up to 4 projects across 6 programs: PPU, PPU-IMAGINE @institutimagine.bsky.social, PPU-@ox.ac.uk, PPU-EID @upcite.bsky.social & more 🧬
Register now ✍️ www.pasteur.fr/en/education...
Apply to up to 4 projects across 6 programs: PPU, PPU-IMAGINE @institutimagine.bsky.social, PPU-@ox.ac.uk, PPU-EID @upcite.bsky.social & more 🧬
Register now ✍️ www.pasteur.fr/en/education...
Reposted by José Manuel Robles-Aguilar
✨ Looking for a paid internship in Europe?
The OECD Internship 2025 in Paris, France is calling! 🌍
Every year, 600+ students join the Organization for Economic Co-operation and Development (OECD) to gain international experience, contribute to policy work, and grow their professional skills.
The OECD Internship 2025 in Paris, France is calling! 🌍
Every year, 600+ students join the Organization for Economic Co-operation and Development (OECD) to gain international experience, contribute to policy work, and grow their professional skills.
August 29, 2025 at 9:58 AM
✨ Looking for a paid internship in Europe?
The OECD Internship 2025 in Paris, France is calling! 🌍
Every year, 600+ students join the Organization for Economic Co-operation and Development (OECD) to gain international experience, contribute to policy work, and grow their professional skills.
The OECD Internship 2025 in Paris, France is calling! 🌍
Every year, 600+ students join the Organization for Economic Co-operation and Development (OECD) to gain international experience, contribute to policy work, and grow their professional skills.
Reposted by José Manuel Robles-Aguilar
Choosing a PhD program is a big decision. Want a program that is tailored to your research interests and career development plans? Join us for our PhD information session series featuring Mount Sinai faculty and students 👉 mshs.co/4dnWnNQ
August 29, 2025 at 12:48 PM
Choosing a PhD program is a big decision. Want a program that is tailored to your research interests and career development plans? Join us for our PhD information session series featuring Mount Sinai faculty and students 👉 mshs.co/4dnWnNQ
Reposted by José Manuel Robles-Aguilar
AI is transforming medicine – from diagnosis to surgery. But innovation needs responsibility. From Oct 6–8, the “Shaping the Future of Medical Decisions” symposium in Göttingen brings experts from science, ethics, & law together. Register by Aug 31 to join them: ⬇️
gccc.umg.eu/ai-in-health...
gccc.umg.eu/ai-in-health...
August 22, 2025 at 10:53 AM
AI is transforming medicine – from diagnosis to surgery. But innovation needs responsibility. From Oct 6–8, the “Shaping the Future of Medical Decisions” symposium in Göttingen brings experts from science, ethics, & law together. Register by Aug 31 to join them: ⬇️
gccc.umg.eu/ai-in-health...
gccc.umg.eu/ai-in-health...