Foijer Lab
banner
foijer-lab.bsky.social
Foijer Lab
@foijer-lab.bsky.social
We study how chromosomal instability leads to cancer and try to think of clever ways to exploit chromosomal instability as a targetable vulnerability to treat cancer
Pinned
The Foijer lab is making a new start @bsky.app, moving away from X. We will continue to update you of our science news and share news of others as previously, and maybe even a bit more proactively :). Let's stay in touch!
Reposted by Foijer Lab
#1 Centromeres are epigenetic loci defined by CENP-A, positioned in unmethylated DNA flanked by highly methylated regions. Our work, published in @natgenet.nature.com in collaboration with @naltemose.bsky.social investigates the role of DNAme at human centromeres www.nature.com/articles/s41...
DNA methylation influences human centromere positioning and function - Nature Genetics
Genome-wide and targeted perturbation of DNA methylation at centromeres affects CENP-A positioning and centromere structure, resulting in aneuploidy and reduced cell viability.
www.nature.com
September 4, 2025 at 1:10 PM
Reposted by Foijer Lab
📢ONLINE @natgenet.nature.com

📰DNA methylation influences human centromere positioning and function.

By Catalina Salinas-Luypaert, @dfachinetti.bsky.social, @naltemose.bsky.social and colleagues.

⬇️

www.nature.com/articles/s41...
DNA methylation influences human centromere positioning and function - Nature Genetics
Genome-wide and targeted perturbation of DNA methylation at centromeres affects CENP-A positioning and centromere structure, resulting in aneuploidy and reduced cell viability.
www.nature.com
September 5, 2025 at 12:32 PM
Reposted by Foijer Lab
Using barcodes 📊 to track cancer 💊 resistance evolution: is it clonal selection or plasticity? @fwhiting.bsky.social‬ knows! His new "Evolutionary Informed Resistance Assays" (EIRAs) framework infers resistance evolution dynamics from barcode diversity data. www.nature.com/articles/s41... @icr.ac.uk
Quantitative measurement of phenotype dynamics during cancer drug resistance evolution using genetic barcoding - Nature Communications
Understanding the dynamics of how drug resistance originates in cancer remains crucial, but it is not possible to observe them directly. Here, the authors construct a mathematical framework to infer d...
www.nature.com
June 20, 2025 at 12:49 PM
Reposted by Foijer Lab
Excited our paper is out! G-quadruplex (G4) unwinding via an intricate G-loop assembly and disassembly mechanism maintains genome integrity. Pioneered by Koichi Sato with great collaborators Jing Lyu and @simonelsasser.bsky.social Check it out: www.science.org/doi/10.1126/science.adr0493 🧵(1/4)
RNA transcripts regulate G-quadruplex landscapes through G-loop formation
G-quadruplexes (G4s) are prevalent DNA structures that regulate transcription but also threaten genome stability. How G4 dynamics are controlled remains poorly understood. Here, we report that RNA tra...
www.science.org
June 13, 2025 at 9:33 AM
Reposted by Foijer Lab
🧬 New tool to generate aneuploidies and analyse their impact on development.

The tool created by @milanlab.bsky.social helps better understand this phenomenon, which is the main cause of spontaneous miscarriage.

📰 Published in #CellGenomics by #IRBBarcelona

Read the news ➡️ shorturl.at/Ektif

👇
June 3, 2025 at 3:23 PM
Reposted by Foijer Lab
👋 Are you looking for a postdoc position? Do you think microtubules are fascinating? Then we might have the job for you! 2-year funded postdoc to join our lab!
👉 deadline 20/06
👇 check it out

www.godinholab.com
June 3, 2025 at 8:57 AM
No brainer for talented bioinformaticians: great team, great science, great mentor! Apply!
Hi all, my team institut-curie.org/team/fachine... @institutcurie.bsky.social is looking for a Bioinformatician.
You can find more details about the position here: euraxess.ec.europa.eu/jobs/344508 Is anyone looking for a job in the lovely Paris?
May 21, 2025 at 6:16 PM
Reposted by Foijer Lab
Incoming - new preprint alert from the Parkes lab led by @brunobeernaert.bsky.social Full bluetutorial follows! 1/ 11 www.biorxiv.org/content/10.1...
May 12, 2025 at 12:08 PM
Reposted by Foijer Lab
The @embo.org #chromoploidy2025 is over. It was an amazing workshop organized by a perfect match of scientists and friends @mcclellandlab.bsky.social @bendavidlab.bsky.social @stesantaguida.bsky.social @foijer-lab.bsky.social, Elsa Logarinho, Caroline Audouin and myself
May 4, 2025 at 3:34 PM
Reposted by Foijer Lab
Excited to get the #EMBOChromoploidy meeting started! 3 days of fantastic science and fun in beautiful Stresa are beginning now!

meetings.embo.org/event/25-ane...
Chromosome Segregation and Aneuploidy
Aneuploidy is a hallmark of cancer and developmental disorders such as Down syndrome. Understanding how cells accomplish faithful chromosome segregation and how chromosomal instability (CIN) impacts …
meetings.embo.org
April 27, 2025 at 12:55 PM
Reposted by Foijer Lab
Super cool new preprint: FANCD2:FANCI is a sensor of open chromatin, independent of DNA damage, but further increased at double strand breaks.
www.biorxiv.org/content/10.1...
The FANCD2-FANCI heterodimer coordinates chromatin openness and cell cycle progression throughout DNA double-strand break repair
The FANCD2-FANCI heterodimer contributes to DNA repair at interstrand crosslinks and sites of replication stress. This complex has been physically and mechanistically linked to double-strand break (DSB) repair, but its role in that process remains undefined. Here we show that the FANCD2-FANCI heterodimer dynamically interacts with open chromatin regions, including transient, DSB-induced open chromatin, where it can be stabilized by co-activation by the DNA repair kinase ATM and the Fanconi anemia core ubiquitin ligase. The loaded FANCD2-FANCI heterodimer stabilizes open chromatin and promotes resection and loading of RPA through increased association of BRCA1 and BLM. Chromatin-loaded FANCD2-FANCI has a second distinct function promoting a G2 arrest that is dependent on the ATR-CHK1-WEE1 axis. Our results support a two-step genome surveillance model in which FANCD2-FANCI monitors open chromatin sites and is stably loaded to coordinate DNA repair activities in response to signaling from a DNA repair kinase. ### Competing Interest Statement The authors have declared no competing interest.
www.biorxiv.org
April 24, 2025 at 4:24 AM
Reposted by Foijer Lab
Delighted to share a chemical-genetic system we developed to rapidly inhibit a serine/threonine phosphatase complex (within secs). This will make it much easier to study #phosphatases. The system is also applicable to other “undruggable” enzymes.

www.nature.com/articles/s41...
A chemical-genetic system to rapidly inhibit the PP2A-B56 phosphatase reveals a role at metaphase kinetochores - Nature Communications
Phosphatase enzymes are challenging to study due to a lack of specific inhibitors. Here, authors develop a chemical-genetic system to inhibit and characterize a major Ser/Thr phosphatase complex, and ...
www.nature.com
April 1, 2025 at 5:58 PM
Reposted by Foijer Lab
We now have a Twitter account, to reach people who are not on bluesky—and to help get them here.

If you still have a Twitter account please follow us there, and ask others to follow too.
x.com/altnih4science
x.com
March 8, 2025 at 6:03 PM
Reposted by Foijer Lab
A window-of-opportunity trial reveals mechanisms of response and resistance to navtemadlin in patients with recurrent glioblastoma | Science Translational Medicine www.science.org/doi/abs/10.1...
A window-of-opportunity trial reveals mechanisms of response and resistance to navtemadlin in patients with recurrent glioblastoma
In patients with glioblastoma, navtemadlin resistance is not mediated by TP53-inactivating mutations, and combination with TMZ may improve efficacy.
www.science.org
February 26, 2025 at 1:11 AM
Reposted by Foijer Lab
Please check out our preprint where we find that mitotic transcription helps ensure ecDNA inheritance through chromosomal tethering:

www.biorxiv.org/content/10.1...
www.biorxiv.org
February 17, 2025 at 11:04 AM
Reposted by Foijer Lab
Dear all,

Postdoc positions are available to work on (1) the role of DNA strand break repair proteins during DNA replication and (2) the molecular/structural biology of XRCC1 protein complexes, as part of our work on genetic diseases & cancer. Contact me if interested: k.w.caldecott@sussex.ac.uk
February 10, 2025 at 2:45 PM
Supper happy to see the results of our longstanding collaboration in @naturecomms.bsky.social. We identify RBM14 as an ARGOS gene to modulate cGAS-STING signalling. Driven by @ms01.bsky.social and @vrendo.bsky.social with @bendavidlab.bsky.social and @rameenberoukhim.bsky.social. rdcu.be/d7Mky
A compendium of Amplification-Related Gain Of Sensitivity genes in human cancer
Nature Communications - In cancer, the impact on cellular fitness of copy-number gains affecting collaterally-amplified genes remains poorly understood compared to oncogenes. Here, the authors...
rdcu.be
January 28, 2025 at 10:11 AM
Reposted by Foijer Lab
New paper out! 🚨🥳

We thought that passenger gene amplifications can drive cancer vulnerabilities and show that RBM14 does so via cGAS-STING modulation 👇
@vrendo.bsky.social @bendavidlab.bsky.social @rameenberoukhim.bsky.social @foijer-lab.bsky.social
January 28, 2025 at 9:49 AM
Reposted by Foijer Lab
Reposted by Foijer Lab
High CDC20 levels increase sensitivity of #cancer cells to MPS1 inhibitors.

-> www.embopress.org/doi/full/10....

High CDC20 expression promotes aneuploid cancer #cell sensitivity to #spindle assembly #checkpoint (SAC) inhibition by prolonging #metaphase and reducing mitotic errors.
January 22, 2025 at 2:21 PM
CDC20 is a modulator of CIN, too much CDC20 promotes CIN, too little CDC20 decreases sensitivity to spindle checkpoint inhibitors. A very fruitful collaboration between the @bendavidlab.bsky.social and our lab. Check out our publication here: www.embopress.org/doi/full/10....
January 22, 2025 at 6:49 PM
The Foijer lab is making a new start @bsky.app, moving away from X. We will continue to update you of our science news and share news of others as previously, and maybe even a bit more proactively :). Let's stay in touch!
January 14, 2025 at 8:31 AM
Reposted by Foijer Lab
Please consider joining us at the next EMBO Chromosome Segregation and Aneuploidy Meeting co-organised by @mcclellandlab.bsky.social @foijer-lab.bsky.social @bendavidlab.bsky.social Elsa Logarinho Dani Fachinetti and myself meetings.embo.org/event/25-ane... 🧬🔬😎
Chromosome Segregation and Aneuploidy
Aneuploidy is a hallmark of cancer and developmental disorders such as Down syndrome. Understanding how cells accomplish faithful chromosome segregation and how chromosomal instability (CIN) impacts …
meetings.embo.org
November 16, 2024 at 4:00 PM
Reposted by Foijer Lab
🚨Our call is open NOW! Join our PhD program in Amsterdam. Deadline: Feb. 28. Apply here: bit.ly/3O4bOjq #PhD
January 7, 2025 at 8:53 AM
Reposted by Foijer Lab
A great initiative to spread the use of non-mammalian models in cancer research!!!!
Beyond Mammals: Exploring Cancer Models Webinar Series (Overview) | Events Registration
Overview The Beyond Mammals: Exploring Cancer Models series will feature three webinars, each focused on one non-mammalian animal model and its applicability to cancer research. Each webinar will high...
events.cancer.gov
January 12, 2025 at 4:00 PM