Michael Schubert
@ms01.bsky.social
Combining computational biology 🧬💻 with outdoor sports in 📍 Innsbruck, Austria • Previously Netherlands Cancer Institute, PhD at EMBL-EBI/Cambridge • 🔗 https://github.com/mschubert
I just released version 0.9.7 of the #clustermq #rstats package: mschubert.github.io/clustermq/
_Run your code on HPC or via SSH via one line of code_
Please check it out; feedback is welcome!
_Run your code on HPC or via SSH via one line of code_
Please check it out; feedback is welcome!
Evaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM, PBS/Torque)
Evaluate arbitrary function calls using workers on HPC schedulers in single line of code. All processing is done on the network without accessing the file system. Remote schedulers are supported via S...
mschubert.github.io
February 12, 2025 at 11:58 AM
I just released version 0.9.7 of the #clustermq #rstats package: mschubert.github.io/clustermq/
_Run your code on HPC or via SSH via one line of code_
Please check it out; feedback is welcome!
_Run your code on HPC or via SSH via one line of code_
Please check it out; feedback is welcome!
New paper out! 🚨🥳
We thought that passenger gene amplifications can drive cancer vulnerabilities and show that RBM14 does so via cGAS-STING modulation 👇
@vrendo.bsky.social @bendavidlab.bsky.social @rameenberoukhim.bsky.social @foijer-lab.bsky.social
We thought that passenger gene amplifications can drive cancer vulnerabilities and show that RBM14 does so via cGAS-STING modulation 👇
@vrendo.bsky.social @bendavidlab.bsky.social @rameenberoukhim.bsky.social @foijer-lab.bsky.social
So excited to see our paper describing the class of ARGOS genes in cancer out in @naturecomms.bsky.social! 🤩
www.nature.com/articles/s41...
A giant effort led with @ms01.bsky.social and executed under the mentorship of @bendavidlab.bsky.social @rameenberoukhim.bsky.social @foijer-lab.bsky.social
🧵👇:
www.nature.com/articles/s41...
A giant effort led with @ms01.bsky.social and executed under the mentorship of @bendavidlab.bsky.social @rameenberoukhim.bsky.social @foijer-lab.bsky.social
🧵👇:
A compendium of Amplification-Related Gain Of Sensitivity genes in human cancer - Nature Communications
In cancer, the impact on cellular fitness of copy-number gains affecting collaterally-amplified genes remains poorly understood compared to oncogenes. Here, the authors integrate genomic data from tum...
nature.com
January 28, 2025 at 9:49 AM
New paper out! 🚨🥳
We thought that passenger gene amplifications can drive cancer vulnerabilities and show that RBM14 does so via cGAS-STING modulation 👇
@vrendo.bsky.social @bendavidlab.bsky.social @rameenberoukhim.bsky.social @foijer-lab.bsky.social
We thought that passenger gene amplifications can drive cancer vulnerabilities and show that RBM14 does so via cGAS-STING modulation 👇
@vrendo.bsky.social @bendavidlab.bsky.social @rameenberoukhim.bsky.social @foijer-lab.bsky.social