Enrico Sandro Colizzi
@escolizzi.bsky.social
Tenured scientist @INRIA, Lyon. Studying how microbes evolve new stuff with computer simulations.
Reposted by Enrico Sandro Colizzi
Let me use this as an opportunity to talk about Jordi et al's very cool paper, now out in PNAS 🧪:
pmc.ncbi.nlm.nih.gov/articles/PMC...
You can read our news and views here: www.pnas.org/doi/10.1073/...
pmc.ncbi.nlm.nih.gov/articles/PMC...
You can read our news and views here: www.pnas.org/doi/10.1073/...
November 13, 2025 at 4:13 PM
Let me use this as an opportunity to talk about Jordi et al's very cool paper, now out in PNAS 🧪:
pmc.ncbi.nlm.nih.gov/articles/PMC...
You can read our news and views here: www.pnas.org/doi/10.1073/...
pmc.ncbi.nlm.nih.gov/articles/PMC...
You can read our news and views here: www.pnas.org/doi/10.1073/...
Reposted by Enrico Sandro Colizzi
Mycobacterium smegmatis Expands Across Surfaces by Hydraulic Sliding - Environmental Microbiology Reports enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/... - Our new paper is out!
enviromicro-journals.onlinelibrary.wiley.com
October 30, 2025 at 8:23 PM
Mycobacterium smegmatis Expands Across Surfaces by Hydraulic Sliding - Environmental Microbiology Reports enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/... - Our new paper is out!
Reposted by Enrico Sandro Colizzi
#microsky #mevosky @spp2389.bsky.social
A PhD position is available in my lab to work on:
Emergence and self-organisation of bacterial metabolism in consortia of cross-feeding bacteria.
Please RT
Deadline: 12.11.25
More infos 👇
shorturl.at/rAKAT
A PhD position is available in my lab to work on:
Emergence and self-organisation of bacterial metabolism in consortia of cross-feeding bacteria.
Please RT
Deadline: 12.11.25
More infos 👇
shorturl.at/rAKAT
October 28, 2025 at 8:43 AM
#microsky #mevosky @spp2389.bsky.social
A PhD position is available in my lab to work on:
Emergence and self-organisation of bacterial metabolism in consortia of cross-feeding bacteria.
Please RT
Deadline: 12.11.25
More infos 👇
shorturl.at/rAKAT
A PhD position is available in my lab to work on:
Emergence and self-organisation of bacterial metabolism in consortia of cross-feeding bacteria.
Please RT
Deadline: 12.11.25
More infos 👇
shorturl.at/rAKAT
Reposted by Enrico Sandro Colizzi
The @crick.ac.uk is recruiting Early Career Group Leaders
- Lab set-up, research costs, salaries for up to 5 researchers
- Support for up to 12 years
- Access to our core facilities
- Competitive salary
- Fantastic colleagues
- All areas of biology
Deadline 27 Nov
www.crick.ac.uk/careers-stud...
- Lab set-up, research costs, salaries for up to 5 researchers
- Support for up to 12 years
- Access to our core facilities
- Competitive salary
- Fantastic colleagues
- All areas of biology
Deadline 27 Nov
www.crick.ac.uk/careers-stud...
Early career group leaders
We appoint researchers from across biology and biomedicine to set up their first groups at the Crick.
www.crick.ac.uk
October 10, 2025 at 8:20 AM
The @crick.ac.uk is recruiting Early Career Group Leaders
- Lab set-up, research costs, salaries for up to 5 researchers
- Support for up to 12 years
- Access to our core facilities
- Competitive salary
- Fantastic colleagues
- All areas of biology
Deadline 27 Nov
www.crick.ac.uk/careers-stud...
- Lab set-up, research costs, salaries for up to 5 researchers
- Support for up to 12 years
- Access to our core facilities
- Competitive salary
- Fantastic colleagues
- All areas of biology
Deadline 27 Nov
www.crick.ac.uk/careers-stud...
Reposted by Enrico Sandro Colizzi
From polymicrobial water kefir grains to PCD in biofilms, microorganisms are magnificently multicellular!
Thanks to @embo.org @ibe-barcelona.bsky.social for having Lena Friebel and Thorsten Mascher @tudresden.bsky.social as well as @escolizzi.bsky.social at the
#Multicellverse workshop
Thanks to @embo.org @ibe-barcelona.bsky.social for having Lena Friebel and Thorsten Mascher @tudresden.bsky.social as well as @escolizzi.bsky.social at the
#Multicellverse workshop
October 11, 2025 at 12:04 PM
From polymicrobial water kefir grains to PCD in biofilms, microorganisms are magnificently multicellular!
Thanks to @embo.org @ibe-barcelona.bsky.social for having Lena Friebel and Thorsten Mascher @tudresden.bsky.social as well as @escolizzi.bsky.social at the
#Multicellverse workshop
Thanks to @embo.org @ibe-barcelona.bsky.social for having Lena Friebel and Thorsten Mascher @tudresden.bsky.social as well as @escolizzi.bsky.social at the
#Multicellverse workshop
Reposted by Enrico Sandro Colizzi
Latest from ours: www.cell.com/cell-reports...
This is two stories in one: a case study/cautionary tale on developing genetic tools in new organisms, and the first hint at a gene regulatory network for choanoflagellate multicellular development (which turn out to involve a Hippo/YAP/ECM loop!) A 🧵
This is two stories in one: a case study/cautionary tale on developing genetic tools in new organisms, and the first hint at a gene regulatory network for choanoflagellate multicellular development (which turn out to involve a Hippo/YAP/ECM loop!) A 🧵
October 5, 2025 at 10:35 AM
Latest from ours: www.cell.com/cell-reports...
This is two stories in one: a case study/cautionary tale on developing genetic tools in new organisms, and the first hint at a gene regulatory network for choanoflagellate multicellular development (which turn out to involve a Hippo/YAP/ECM loop!) A 🧵
This is two stories in one: a case study/cautionary tale on developing genetic tools in new organisms, and the first hint at a gene regulatory network for choanoflagellate multicellular development (which turn out to involve a Hippo/YAP/ECM loop!) A 🧵
Reposted by Enrico Sandro Colizzi
Only a few days left to apply!
My group is looking for a postdoc to engineer and deploy new tools to precisely manipulate and decode how auxin coordinates plant morphogenesis.
@starmorph-syg.bsky.social
Research Associate - Reprogramming Development (closes 7 October 2025)
My group is looking for a postdoc to engineer and deploy new tools to precisely manipulate and decode how auxin coordinates plant morphogenesis.
@starmorph-syg.bsky.social
Research Associate - Reprogramming Development (closes 7 October 2025)
www.cam.ac.uk
October 3, 2025 at 3:34 PM
Only a few days left to apply!
My group is looking for a postdoc to engineer and deploy new tools to precisely manipulate and decode how auxin coordinates plant morphogenesis.
@starmorph-syg.bsky.social
Research Associate - Reprogramming Development (closes 7 October 2025)
My group is looking for a postdoc to engineer and deploy new tools to precisely manipulate and decode how auxin coordinates plant morphogenesis.
@starmorph-syg.bsky.social
Research Associate - Reprogramming Development (closes 7 October 2025)
Reposted by Enrico Sandro Colizzi
VACANCY - Independent research fellowships leading to tenured positions
We’re inviting applications from outstanding researchers who either hold, or wish to apply for, Independent Research Fellowships.
APPLICATION DEADLINE: 10 November 2025
Click here to apply: jic.link/Fellows
We’re inviting applications from outstanding researchers who either hold, or wish to apply for, Independent Research Fellowships.
APPLICATION DEADLINE: 10 November 2025
Click here to apply: jic.link/Fellows
October 3, 2025 at 3:11 PM
VACANCY - Independent research fellowships leading to tenured positions
We’re inviting applications from outstanding researchers who either hold, or wish to apply for, Independent Research Fellowships.
APPLICATION DEADLINE: 10 November 2025
Click here to apply: jic.link/Fellows
We’re inviting applications from outstanding researchers who either hold, or wish to apply for, Independent Research Fellowships.
APPLICATION DEADLINE: 10 November 2025
Click here to apply: jic.link/Fellows
Reposted by Enrico Sandro Colizzi
VACANCY - Independent research fellowships leading to tenured positions
We’re inviting applications from outstanding researchers who either hold, or wish to apply for, Independent Research Fellowships.
APPLICATION DEADLINE: 10 November 2025
Click here to apply: jic.link/Fellows
We’re inviting applications from outstanding researchers who either hold, or wish to apply for, Independent Research Fellowships.
APPLICATION DEADLINE: 10 November 2025
Click here to apply: jic.link/Fellows
October 3, 2025 at 5:09 PM
Reposted by Enrico Sandro Colizzi
Happy to share slightly late that the main work of my PhD is now published! How do plants regulate the number + location of growing branches 🌳🌲? We used experiments and mathematical modelling to study how local and systemic signals are integrated during shoot branching regulation. A thread:
How do #plants dynamically modulate their shoot branching for optimal returns? @zoenahas.bsky.social &co show that BRC1 modulates bud competitiveness by reducing #auxin efflux, integrating hormonal cues to fine-tune branching patterns @plosbiology.org @slcuplants.bsky.social 🧪 plos.io/4pnrwY2
September 26, 2025 at 10:40 AM
Happy to share slightly late that the main work of my PhD is now published! How do plants regulate the number + location of growing branches 🌳🌲? We used experiments and mathematical modelling to study how local and systemic signals are integrated during shoot branching regulation. A thread:
Reposted by Enrico Sandro Colizzi
Delighted to see our paper studying the evolution of plasmids over the last 100 years, now out! Years of work by Adrian Cazares, also Nick Thomson @sangerinstitute.bsky.social - this version much improved over the preprint. Final version should be open access, apols.
Thread 1/n
Thread 1/n
September 25, 2025 at 9:29 PM
Delighted to see our paper studying the evolution of plasmids over the last 100 years, now out! Years of work by Adrian Cazares, also Nick Thomson @sangerinstitute.bsky.social - this version much improved over the preprint. Final version should be open access, apols.
Thread 1/n
Thread 1/n
Reposted by Enrico Sandro Colizzi
Less than a month away! 📣 Our lab is so excited to co-host the #EMBOWorkshop on the evolution of #multicellularity.
Get ready to dive deep into the origins of multicellular life across all kingdoms. 🔬See you in Barcelona (or online) soon!
@prbb.org @csic.es
Get ready to dive deep into the origins of multicellular life across all kingdoms. 🔬See you in Barcelona (or online) soon!
@prbb.org @csic.es
📣The #EMBOWorkshop is almost here!
🔬 Learn all about the evolution and origins of multicellularity 🦠🧬 from October 9–11, ONLINE🤩
🗓️ Register by September 5 ➡️ https://meetings.embo.org/event/25-multicellularity
#UnravellingEvolution #DiscoveringLife
🔬 Learn all about the evolution and origins of multicellularity 🦠🧬 from October 9–11, ONLINE🤩
🗓️ Register by September 5 ➡️ https://meetings.embo.org/event/25-multicellularity
#UnravellingEvolution #DiscoveringLife
September 10, 2025 at 9:46 AM
Less than a month away! 📣 Our lab is so excited to co-host the #EMBOWorkshop on the evolution of #multicellularity.
Get ready to dive deep into the origins of multicellular life across all kingdoms. 🔬See you in Barcelona (or online) soon!
@prbb.org @csic.es
Get ready to dive deep into the origins of multicellular life across all kingdoms. 🔬See you in Barcelona (or online) soon!
@prbb.org @csic.es
Reposted by Enrico Sandro Colizzi
🚨 We're hiring!
PhD position in Evolutionary Systems Biology at Stockholm University & SciLifeLab
🎓 Focus: evolution, development, computational & mathematical modeling, prediction
📍 Stockholm, Sweden
🕒 4 years, fully-funded
🔍 Details: su.varbi.com/en/what:job/...
Please share!
PhD position in Evolutionary Systems Biology at Stockholm University & SciLifeLab
🎓 Focus: evolution, development, computational & mathematical modeling, prediction
📍 Stockholm, Sweden
🕒 4 years, fully-funded
🔍 Details: su.varbi.com/en/what:job/...
Please share!
August 25, 2025 at 9:01 AM
🚨 We're hiring!
PhD position in Evolutionary Systems Biology at Stockholm University & SciLifeLab
🎓 Focus: evolution, development, computational & mathematical modeling, prediction
📍 Stockholm, Sweden
🕒 4 years, fully-funded
🔍 Details: su.varbi.com/en/what:job/...
Please share!
PhD position in Evolutionary Systems Biology at Stockholm University & SciLifeLab
🎓 Focus: evolution, development, computational & mathematical modeling, prediction
📍 Stockholm, Sweden
🕒 4 years, fully-funded
🔍 Details: su.varbi.com/en/what:job/...
Please share!
Reposted by Enrico Sandro Colizzi
We are looking for new colleagues to come join us in Galway as group leaders (Junior and Senior). The Centre for Chromosome Biology is a great place and it is a good time to join. Please reach out if you want to chat about the opportunity!
www.nature.com/naturecareer...
www.nature.com/naturecareer...
July 16, 2025 at 8:56 AM
We are looking for new colleagues to come join us in Galway as group leaders (Junior and Senior). The Centre for Chromosome Biology is a great place and it is a good time to join. Please reach out if you want to chat about the opportunity!
www.nature.com/naturecareer...
www.nature.com/naturecareer...
Reposted by Enrico Sandro Colizzi
Thrilled to have our spatial single-cell atlas of the Arabidopsis lifecycle in @NaturePlants. Turns out that its easy to make nice images when spatial expression of 1,000 genes is available! 1/n
@natanellae.bsky.social @tatsuyanobori.bsky.social @joeecker.bsky.social
www.nature.com/articles/s41...
@natanellae.bsky.social @tatsuyanobori.bsky.social @joeecker.bsky.social
www.nature.com/articles/s41...
August 19, 2025 at 9:17 AM
Thrilled to have our spatial single-cell atlas of the Arabidopsis lifecycle in @NaturePlants. Turns out that its easy to make nice images when spatial expression of 1,000 genes is available! 1/n
@natanellae.bsky.social @tatsuyanobori.bsky.social @joeecker.bsky.social
www.nature.com/articles/s41...
@natanellae.bsky.social @tatsuyanobori.bsky.social @joeecker.bsky.social
www.nature.com/articles/s41...
Reposted by Enrico Sandro Colizzi
Synthetic ecosystems that autonomously and continuously evolve in silico 👾
An Alifer dream we pursue with Flow-Lenia, a mass-conservative continuous CA !
If you are interested in complex systems with (1) emergent creatures and (2) intrinsic evolutionary dynamics, go check our new paper !
A 🧵
An Alifer dream we pursue with Flow-Lenia, a mass-conservative continuous CA !
If you are interested in complex systems with (1) emergent creatures and (2) intrinsic evolutionary dynamics, go check our new paper !
A 🧵
June 24, 2025 at 5:37 PM
Synthetic ecosystems that autonomously and continuously evolve in silico 👾
An Alifer dream we pursue with Flow-Lenia, a mass-conservative continuous CA !
If you are interested in complex systems with (1) emergent creatures and (2) intrinsic evolutionary dynamics, go check our new paper !
A 🧵
An Alifer dream we pursue with Flow-Lenia, a mass-conservative continuous CA !
If you are interested in complex systems with (1) emergent creatures and (2) intrinsic evolutionary dynamics, go check our new paper !
A 🧵
Reposted by Enrico Sandro Colizzi
Extended Flow-Lenia paper is out in the ALife journal, with more experiments and insights! See 🧵 from 1st-author
@eplantec.bsky.social for a summary.
For a full overview of our research in Artificial Life, here is a talk I gave at the Demeco workshop at EPFL
:
youtube.com/watch?v=YYFr...
@eplantec.bsky.social for a summary.
For a full overview of our research in Artificial Life, here is a talk I gave at the Demeco workshop at EPFL
:
youtube.com/watch?v=YYFr...
June 26, 2025 at 4:28 PM
Extended Flow-Lenia paper is out in the ALife journal, with more experiments and insights! See 🧵 from 1st-author
@eplantec.bsky.social for a summary.
For a full overview of our research in Artificial Life, here is a talk I gave at the Demeco workshop at EPFL
:
youtube.com/watch?v=YYFr...
@eplantec.bsky.social for a summary.
For a full overview of our research in Artificial Life, here is a talk I gave at the Demeco workshop at EPFL
:
youtube.com/watch?v=YYFr...
Reposted by Enrico Sandro Colizzi
Reposted by Enrico Sandro Colizzi
1/🚨 New preprint alert! Can mutualists and pathogens co-colonise the same living plant cell and what does that do to the plant membranes that surround these microbes?
June 24, 2025 at 4:54 PM
1/🚨 New preprint alert! Can mutualists and pathogens co-colonise the same living plant cell and what does that do to the plant membranes that surround these microbes?
Reposted by Enrico Sandro Colizzi
1/27 We have a new paper out! Turns out that snowflake yeast have been hiding a secret from us - they've evolved a (very!) crude circulatory system. Not with blood vessels or a heart, but through spontaneous fluid flows powered by their metabolism. 🧪🔬
www.science.org/doi/full/10....
www.science.org/doi/full/10....
June 24, 2025 at 4:52 PM
1/27 We have a new paper out! Turns out that snowflake yeast have been hiding a secret from us - they've evolved a (very!) crude circulatory system. Not with blood vessels or a heart, but through spontaneous fluid flows powered by their metabolism. 🧪🔬
www.science.org/doi/full/10....
www.science.org/doi/full/10....
Reposted by Enrico Sandro Colizzi
Reposted by Enrico Sandro Colizzi
Understanding and predicting microbial evolutionary dynamics 2025 will be taking place on 26–27 November 2025 in Liverpool, UK. Register now: microb.io/MicroEvo25 #MicroEvo25
Understanding and predicting microbial evolutionary dynamics 2025
26 - 27 November 2025 - Liverpool, UK
microb.io
June 13, 2025 at 1:04 PM
Understanding and predicting microbial evolutionary dynamics 2025 will be taking place on 26–27 November 2025 in Liverpool, UK. Register now: microb.io/MicroEvo25 #MicroEvo25
Reposted by Enrico Sandro Colizzi
Thrilled to share our new paper in @science.org describing our discovery that bacteria can switch from competitors to bonafide predators when resources run dry—arming nanoscale “spears” (T6SS) to stab & consume neighbours.
www.science.org/doi/10.1126/...
#MicroSKy #Microbiology
www.science.org/doi/10.1126/...
#MicroSKy #Microbiology
Antagonism as a foraging strategy in microbial communities
In natural habitats, nutrient availability limits bacterial growth. We discovered that bacteria can overcome this limitation by acquiring nutrients by lysing neighboring cells through contact-dependen...
www.science.org
June 13, 2025 at 5:39 AM
Thrilled to share our new paper in @science.org describing our discovery that bacteria can switch from competitors to bonafide predators when resources run dry—arming nanoscale “spears” (T6SS) to stab & consume neighbours.
www.science.org/doi/10.1126/...
#MicroSKy #Microbiology
www.science.org/doi/10.1126/...
#MicroSKy #Microbiology
Reposted by Enrico Sandro Colizzi
We are recruiting a tenure-track assistant professor in molecular microbiology in our department in Lausanne! Do consider appyling!!
Come join us in beautiful Lausanne! Deadline for applications: August 10th, 2025
wwwfbm.unil.ch/releve/appli...
wwwfbm.unil.ch/releve/appli...
June 12, 2025 at 12:45 PM
We are recruiting a tenure-track assistant professor in molecular microbiology in our department in Lausanne! Do consider appyling!!
Reposted by Enrico Sandro Colizzi
Today we celebrate over 40 years of research of Rob de Boer, chair Professor of Theoretical Biology.
Rob complemented his tremendous scientific career with a deep impact in multiple roles, as a dedicated teacher, an inspiring mentor, and a kind and generous colleague. Thank you, Rob!
Rob complemented his tremendous scientific career with a deep impact in multiple roles, as a dedicated teacher, an inspiring mentor, and a kind and generous colleague. Thank you, Rob!
June 12, 2025 at 8:33 AM
Today we celebrate over 40 years of research of Rob de Boer, chair Professor of Theoretical Biology.
Rob complemented his tremendous scientific career with a deep impact in multiple roles, as a dedicated teacher, an inspiring mentor, and a kind and generous colleague. Thank you, Rob!
Rob complemented his tremendous scientific career with a deep impact in multiple roles, as a dedicated teacher, an inspiring mentor, and a kind and generous colleague. Thank you, Rob!