Rory Mulloy
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rorymulloy.bsky.social
Rory Mulloy
@rorymulloy.bsky.social
PhDing in the @CorcoranLab, dabbles with RNA granules, viruses, and the outdoors
Pinned
Pre-print is up! SARS-2 produces a truncated N protein to antagonize multiple antiviral pathways. A very collaborative project in the @corcoranlab.bsky.social with @nogasharlin.bsky.social, Danyel Evseev, and Max Bui-Marinos, and of course the boss Jenn Corcoran

www.biorxiv.org/content/10.1...
Reposted by Rory Mulloy
Multiple rotavirus species encode fusion-associated small transmembrane (FAST) proteins with cell type-specific activity journals.asm.org/doi/10.1128/...
Multiple rotavirus species encode fusion-associated small transmembrane (FAST) proteins with cell type-specific activity | Journal of Virology
Mechanisms of membrane fusion and determinants of host range for pathogens remain poorly understood. Improved understanding of these concepts could open new areas for therapeutic development and shed light on virus epidemiology. Our analyses of NSP1-1 proteins from species B, G, and I rotaviruses provide insights into the variability tolerated by functional FAST proteins. Further, the observation that all putative FAST proteins tested can induce syncytium formation in at least some cell types provides evidence that rotaviruses that encode NSP1-1 proteins are fusogenic viruses. Finally, although the criteria for their specificity remain unclear, our observations regarding fusion capacities of different NSP1-1 proteins and of chimeric FAST proteins suggest a potential role for rotavirus FAST proteins in determining the efficiency of viral replication within a given host or cell type.
journals.asm.org
November 12, 2025 at 2:47 PM
Reposted by Rory Mulloy
Our new preprint is out 🥳🥳🥳

Henipaviruses, like Nipah and Hendra, package their genomes inside helical shells built by thousands of nucleoproteins. These nucleocapsids are essential to protect the viral RNA, but how do they ever let the polymerase in to read the sequence?

👇
November 3, 2025 at 12:26 PM
Reposted by Rory Mulloy
1/ Excited to share our new study with @brumbaugh-lab.bsky.social, out in @natbiotech.nature.com! P-bodies selectively sequester RNAs encoding cell fate regulators, often from the preceding developmental stage. Releasing these RNAs can drive changes in cell identity. 🧵 www.nature.com/articles/s41...
Selective RNA sequestration in biomolecular condensates directs cell fate transitions - Nature Biotechnology
Stem cell differentiation is controlled by manipulating RNA condensates.
www.nature.com
October 28, 2025 at 4:02 PM
Reposted by Rory Mulloy
Congrats to the Blue Jays.
I’m going to sulk for a few days but what an amazing season for the @mariners.com
Proud of this team
October 21, 2025 at 3:09 AM
Reposted by Rory Mulloy
Virus driven Disruption of Transcription Termination (DoTT) generated cellular Z-RNAs are bona fide ZBP1 ligands driving cell death as a host response to counter viral disruption of the cellular transcriptional machinery @nature.com @foxchasecancer.bsky.social
www.nature.com/articles/s41...
October 13, 2025 at 5:54 PM
Reposted by Rory Mulloy
🧬 Exciting news from our lab 🧬 The Swiss National Science Foundation (SNSF) has approved our project studying KSHV and RNA decay: our first grant since re-launching the lab in Switzerland 🎉 We’re now looking for a Postdoc and a PhD student to join the team (start date January 2026) - please repost!
October 6, 2025 at 9:19 AM
Reposted by Rory Mulloy
I made a sign for the lab with our informal lab motto, inspired by this convo between @itaiyanai.bsky.social and Martin Lercher: nightscience.buzzsprout.com/1744020/epis.... A good reminder that talking is among the best forms of thinking!
September 30, 2025 at 4:54 PM
Reposted by Rory Mulloy
In new study led by @bdadonaite.bsky.social, we measure how spike mutations affect function & antigenicity of spike of KP.3.1.1 strain of SARS-CoV-2.

Sheds light on how key neutralizing epitopes are changing & importance of RBD up/down motion.

www.biorxiv.org/content/10.1...
Spike mutations that affect the function and antigenicity of recent KP.3.1.1-like SARS-CoV-2 variants
SARS-CoV-2 is under strong evolutionary selection to acquire mutations in its spike protein that reduce neutralization by human polyclonal antibodies. Here we use pseudovirus-based deep mutational sca...
www.biorxiv.org
August 20, 2025 at 5:22 AM
Reposted by Rory Mulloy
Collaborative study with Kharpeskyy lab @dalhousieu.bsky.social + our lab @ulethbridge.ca (under review) shows: sequence features—not secondary structure—of 5′ UTRs give viral & cellular mRNAs resistance to SARS-CoV-2 Nsp1 host shutoff.

www.biorxiv.org/content/10.1...
Escape from SARS-CoV-2 Nsp1-mediated host shutoff by TIAR transcript reveals general features of Nsp1 resistance
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) immune escape strategies include general inhibition of host gene expression referred to as host shutoff. Viral non-structural protein 1 (Ns...
www.biorxiv.org
August 12, 2025 at 8:17 PM
Reposted by Rory Mulloy
i love you hubble
August 9, 2025 at 11:30 PM
Reposted by Rory Mulloy
August 4, 2025 at 10:45 PM
Reposted by Rory Mulloy
Giant virus endogenization in Acanthamoeba we covered more in detail in a separate manuscript published some weeks ago in @bmc.springernature.com Biology, in a great collaboration with John Archibald's group at Dalhousie: bmcbiol.biomedcentral.com/articles/10..... 6/7
Epigenetic silencing and genome dynamics determine the fate of giant virus endogenizations in Acanthamoeba - BMC Biology
Background Endogenized giant viruses are emerging as major contributors to the genome evolution of microbial eukaryotes, with both degraded and fully functional latent viruses being found integrated i...
bmcbiol.biomedcentral.com
July 28, 2025 at 10:03 AM
Reposted by Rory Mulloy
Crab-like creatures are famed for having evolved five times in evolutionary history. But anteaters have evolved at least 12 times--in half the evolutionary span. Cool story by @jakebuehler.bsky.social for @science.org
‘Things keep evolving into anteaters.’ Odd animals arose at least 12 separate times
Findings speak to the dramatic impact ants and termites can have on mammalian evolution
www.science.org
July 28, 2025 at 3:54 PM
Reposted by Rory Mulloy
Huge congratulations to Dr. Emma LeBlanc on her successful PhD thesis defence yesterday! As my first PhD student, Emma was instrumental in getting my lab up and running, in the midst of a pandemic, while managing to be very productive and do some exciting science along the way! #proudPI
July 23, 2025 at 1:12 PM
Reposted by Rory Mulloy
Finally out!
I’m thrilled to share our new paper (Wolin et al., Cell 2025).

This paper describes SPIDR, a high-throughput method for mapping RBP binding sites.

By combining #SPIDR with #cryoEM, we identified the exact binding site of LARP1 within the #mRNA channel of the 40S ribosomal subunit.
July 22, 2025 at 5:12 PM
Reposted by Rory Mulloy
It’s too late to save these lost young lives in Texas, but not too late to avert the next tragedy that could be fully avoided.

It’s one thing to say you’re making things more efficient and quite another to gut something essential with no replacement.

Turn the f’ing lights back on!

/fin
July 7, 2025 at 1:47 AM
Reposted by Rory Mulloy
'The myth of meritocracy in science collapses under the financial sacrifices expected at every career stage. From unpaid internships and self-funded conferences to underpaid graduate and postdoctoral positions, the hidden costs of ‘doing science’ are profound.'
journals.plos.org/plosbiology/...
Too poor to science: How wealth determines who succeeds in STEM
From student to researcher, a career in science can come with a high price tag. This Perspective explores how persistent financial barriers limit who can succeed in science, revealing how wealth shape...
journals.plos.org
July 6, 2025 at 12:58 AM
Reposted by Rory Mulloy
💥 Couldn’t be more stoked our study identifying a completely new CMV virion surface complex involved in cell entry is now published at Nature Micro 🦠 H/T @paramyxologist.bsky.social + Lauren Henderson, Erica Ollmann Saphire Chris Benedict @natmicrobiol.nature.com www.nature.com/articles/s41...
The GATE glycoprotein complex enhances human cytomegalovirus entry in endothelial cells - Nature Microbiology
The gH-associated tropism and entry (GATE) complex consists of glycoprotein H, UL116 and UL141. This complex is abundant on human cytomegalovirus virions and enables entry into human endothelial cells...
www.nature.com
June 30, 2025 at 4:15 PM
Reposted by Rory Mulloy
New CRISPR technology developed by @stanleyqilab.bsky.social‬, Mengting Han & team could pave the way for potential treatments for neurodegenerative diseases like ALS and spinal muscular dystrophy:
New CRISPR technology could help repair damaged neurons
Stanford researchers have developed a technology that delivers RNA to damaged neurons and stimulates regrowth – paving the way for potential treatments targeting neurodegenerative diseases like ALS…
news.stanford.edu
June 10, 2025 at 7:03 PM
Reposted by Rory Mulloy
Nature research paper: Probing condensate microenvironments with a micropeptide killswitch

https://go.nature.com/4mMlGyc
Probing condensate microenvironments with a micropeptide killswitch - Nature
Targeting a non-natural micropeptide ‘killswitch’ to several biomolecular condensates altered condensate compositions and revealed condensate functions in human cells
go.nature.com
June 9, 2025 at 12:34 PM
Reposted by Rory Mulloy
🚨🚨 News from the @castello-lab.bsky.social and @shabazlab.bsky.social. Our work, led by Louisa Iselin, reveals pervasive changes in the RNA-bound proteome induced by interferon. #RNA, #immunity, #interferon, #host-virus www.biorxiv.org/content/10.1...
June 3, 2025 at 10:01 PM
Reposted by Rory Mulloy
2nd is the brilliant preprint of @corcoranlab.bsky.social & @rorymulloy.bsky.social. It’s a deep dive into all things N*, & every other paragraph drops some new, delightful discovery.
www.biorxiv.org/content/10.1...
15/34
May 26, 2025 at 4:11 PM
Reposted by Rory Mulloy
…prompted me to take a closer look, and for reasons I’ll describe below, I now believe rumors of N*’s death are exaggerated. First, XEC is in terminal decline, replaced by variants with full N* expression, so N* is back in fashion. 3/34
journals.plos.org/plosbiology/...
Emergence of SARS-CoV-2 subgenomic RNAs that enhance viral fitness and immune evasion
Coronaviruses can evolve novel transcription regulatory sequences, generating new RNA transcripts during human infection. This study identifies a prevalent subgenomic RNA in SARS-CoV-2, which produces...
journals.plos.org
May 26, 2025 at 4:11 PM