#EVOLF
#symbiosis
#algae
Please repost
Apply here: www.wur.nl/en/vacancy/p...
Close collaboration between our former PhD students @karimaelm.bsky.social and @chloe-beaulieu.bsky.social !
and the old gard @jacquet-chris.bsky.social @maximebonhomme.bsky.social
www.pnas.org/doi/10.1073/...
Close collaboration between our former PhD students @karimaelm.bsky.social and @chloe-beaulieu.bsky.social !
and the old gard @jacquet-chris.bsky.social @maximebonhomme.bsky.social
www.pnas.org/doi/10.1073/...
- `filter_out()` for dropping rows
- `recode_values()`, `replace_values()`, and `replace_when()` that join `case_when()` as a complete family of recoding/replacing tools
These are huge quality of life wins for #rstats!
tidyverse.org/blog/2026/02...
- `filter_out()` for dropping rows
- `recode_values()`, `replace_values()`, and `replace_when()` that join `case_when()` as a complete family of recoding/replacing tools
These are huge quality of life wins for #rstats!
tidyverse.org/blog/2026/02...
Excited to share my first preprint from my PhD! 🎉
We introduce a novel Aeschynomene evenia – Aphanomyces euteiches pathosystem to explore links between quantitative resistance and symbiosis in legumes. 🌱🔬
🧾 www.biorxiv.org/cgi/content/...
🧵 Thread:
1/9
Excited to share my first preprint from my PhD! 🎉
We introduce a novel Aeschynomene evenia – Aphanomyces euteiches pathosystem to explore links between quantitative resistance and symbiosis in legumes. 🌱🔬
🧾 www.biorxiv.org/cgi/content/...
🧵 Thread:
1/9
Please repost
Apply here: www.wur.nl/en/vacancy/p...
Thanks @pierremarcdelaux.bsky.social and @kellerjeanphd.bsky.social for your SUPERvision ✨
Merci @academiesciences.bsky.social pour cette opportunité et cette belle cérémonie!
Thanks @pierremarcdelaux.bsky.social and @kellerjeanphd.bsky.social for your SUPERvision ✨
Merci @academiesciences.bsky.social pour cette opportunité et cette belle cérémonie!
Our group is seeking a motivated researcher to investigate the molecular mechanisms driving host–endosymbiont interactions.
Full details & application: karriere.hhu.de//index.php?a....
Please help us get the word out!
Our group is seeking a motivated researcher to investigate the molecular mechanisms driving host–endosymbiont interactions.
Full details & application: karriere.hhu.de//index.php?a....
Please help us get the word out!
#SymbioSky
doi.org/10.1371/jour...
#SymbioSky
doi.org/10.1371/jour...
Great teamwork between @lrsv-toulouse.bsky.social and LGDP-Perpignan 😎🥳🌱
academic.oup.com/plcell/advan...
Great teamwork between @lrsv-toulouse.bsky.social and LGDP-Perpignan 😎🥳🌱
academic.oup.com/plcell/advan...
onlinelibrary.wiley.com/doi/epdf/10....
onlinelibrary.wiley.com/doi/epdf/10....
🧵 New preprint out!
WitChi: a fast, open-source Python tool to detect, quantify & prune compositional bias in MSAs.
Lightweight, tree-free, scalable to 5k+ taxa... so we applied it to the GTDB archaea MSA.
#ArchaeaSky #MEvoSky #MicroSky
🔗 doi.org/10.1101/2025...
💻 github.com/stephkoest/w...
🧵 New preprint out!
WitChi: a fast, open-source Python tool to detect, quantify & prune compositional bias in MSAs.
Lightweight, tree-free, scalable to 5k+ taxa... so we applied it to the GTDB archaea MSA.
#ArchaeaSky #MEvoSky #MicroSky
🔗 doi.org/10.1101/2025...
💻 github.com/stephkoest/w...
We tested it on the GTDB r220 archaeal supermatrix (5,869 taxa & 10,101 cols) removing 55% of sites in <2h.
The phylogeny showed several interesting groupings with overall improved branch support:
#phylogenetics #ArchaeaSky #MSA #opensource #MEvoSky #MicroSky
We tested it on the GTDB r220 archaeal supermatrix (5,869 taxa & 10,101 cols) removing 55% of sites in <2h.
The phylogeny showed several interesting groupings with overall improved branch support:
#phylogenetics #ArchaeaSky #MSA #opensource #MEvoSky #MicroSky
Here is a cheatsheet using stringr: rstudio.github.io/cheatsheets...
I probably use stringr::str_replace() once every other day...
to clean up metadata (of course!) #rstats
Here is a cheatsheet using stringr: rstudio.github.io/cheatsheets...
I probably use stringr::str_replace() once every other day...
to clean up metadata (of course!) #rstats
clauswilke.substack.com/p/no-alphafo...
clauswilke.substack.com/p/no-alphafo...
or maybe not. a 🧵
roland @environmicrobio.bsky.social and Krzysztof @ktjurdzinski.bsky.social already commented, please also read their posts.
www.science.org/content/arti...
#MicroSky #SymbioSky #ProtistsOnSky
or maybe not. a 🧵
roland @environmicrobio.bsky.social and Krzysztof @ktjurdzinski.bsky.social already commented, please also read their posts.
www.science.org/content/arti...
#MicroSky #SymbioSky #ProtistsOnSky
PhD student position on microbial genome evolution, focusing on the evolutionary principles underlying bacterial genome architecture.
Please repost and share with talented MSc students in #evobio, bioinformatics or related :)
www.uu.nl/en/organisat...
#MEvoSky #MicroSky
PhD student position on microbial genome evolution, focusing on the evolutionary principles underlying bacterial genome architecture.
Please repost and share with talented MSc students in #evobio, bioinformatics or related :)
www.uu.nl/en/organisat...
#MEvoSky #MicroSky
www.nature.com/articles/s41...
Taking about ferns, are you interested by their immune system? Have a look at our recent preprint by @baptistebio.bsky.social @jacquet-chris.bsky.social 🔽
www.biorxiv.org/content/10.1...
www.nature.com/articles/s41...
Taking about ferns, are you interested by their immune system? Have a look at our recent preprint by @baptistebio.bsky.social @jacquet-chris.bsky.social 🔽
www.biorxiv.org/content/10.1...
www.science.org/doi/10.1126/...
www.science.org/doi/10.1126/...
🧵 New insights into plant immunity: using ferns to understand evolution! 🌱✨🌿
Excited to share my first (but not last) published research at @lrsv-toulouse.bsky.social. A THREAD … [1/9]
🧵 New insights into plant immunity: using ferns to understand evolution! 🌱✨🌿
Excited to share my first (but not last) published research at @lrsv-toulouse.bsky.social. A THREAD … [1/9]
doi.org/10.1111/nph.70054
With: Yvet Boele, @puginiercamille.bsky.social, @mbianc.bsky.social, Cyril Libourel, @maximebonhomme.bsky.social, @kellerjeanphd.bsky.social, @pierremarcdelaux.bsky.social
A thread: (1/5)
doi.org/10.1111/nph.70054
With: Yvet Boele, @puginiercamille.bsky.social, @mbianc.bsky.social, Cyril Libourel, @maximebonhomme.bsky.social, @kellerjeanphd.bsky.social, @pierremarcdelaux.bsky.social
A thread: (1/5)
www.radiofrance.fr/francecultur...
www.radiofrance.fr/francecultur...