Abhinav Sur
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abhinavsur.bsky.social
Abhinav Sur
@abhinavsur.bsky.social
K99/R00 postdoc studying intestinal cell fate and differentiation during zebrafish embryogenesis ~ sc-multiomics, genetics | ex-annelid biologist
Daniocell: https://daniocell.nichd.nih.gov/
I am delighted to announce that I will be starting as an Assistant Professor at the University of Arizona in Spring 2026. Our lab will study intestinal best4+ cells in zebrafish. We are seeking a lab manager with previous zebrafish experience – come build with us.
surlab-gastro.my.canva.site
Home
surlab-gastro.my.canva.site
October 26, 2025 at 12:41 AM
Reposted by Abhinav Sur
Ok, friends! If you’re a Daniocell user, it’s now available again outside of the NIH. Very sorry for any inconvenience this posed for any of you and thanks for your patience. We’re taking additional steps to hopefully prevent similar outages in the future. Happy surfing 🎣
July 30, 2025 at 11:44 PM
Reposted by Abhinav Sur
Transitions in development – an interview with Jeffrey Farrell

@jeffreyafarrell.bsky.social talks about becoming a group leader, his insights on advocacy for developmental biology and his belief in unifying single-cell biology with classical approaches.

journals.biologists.com/dev/article/...
July 28, 2025 at 4:06 PM
For more customized analysis using our zebrafish timecourse dataset available in Daniocell, check out this amazing resource DaniocellDesktop. Extremely happy to see this brainchild of @jeffreyafarrell.bsky.social out in the wild.
If you love Daniocell, but wish it could generate analyses specific to YOUR genes & cell types of interest, check out DaniocellDesktop - a new point-and-click app for Mac and Windows that enables reanalysis of the Daniocell data without programming: daniocell.nichd.nih.gov/desktop/ (1/4)
June 14, 2025 at 12:56 AM
Reposted by Abhinav Sur
Spiralia enthusiasts!! 🐚🐙🐌💛
Our amazing speaker for the Spiralia Satellite symposia at the #PASEDB2025

Néva Meyer, Associate Professor, Clark University

Organizers: Christina Zakas and @albertinlab.bsky.social

#evodevo #pasedb #spiralia
June 12, 2025 at 2:07 PM
Reposted by Abhinav Sur
It was so awesome to have @jeffreyafarrell.bsky.social here to give a departmental seminar today!!
May 21, 2025 at 4:41 AM
Reposted by Abhinav Sur
With a published genome & advancements in gene editing, the field of #zebrafish genetics has exploded in recent decades. We take a look back at major achievements in this infographic. For more, read this book chapter by @varshneylab.social et al (2015)($) doi.org/10.1016/bs.a... #ZebrafishFunFacts 🧪
May 10, 2025 at 9:23 AM
Reposted by Abhinav Sur
Masters of regeneration? #Zebrafish are capable of regenerating their fins, spinal cord, pancreas, skin, retina, heart, liver, brain, tendons, hair cells, & kidney. For more info on this amazing species, read this primer on regeneration: journals.biologists.com/dev/article/... #ZebrafishFunFacts 🧪
May 10, 2025 at 8:14 AM
Reposted by Abhinav Sur
I thought this was an interesting interaction! This Polychaete larva (possibly Spionidae?) has somehow got inside the tube of a Lanice sp. (sand mason worm) larva! The tube resident doesn’t seem too fussed about the visitor though. 🦑 #plankton
May 10, 2025 at 7:57 AM
Reposted by Abhinav Sur
Happy to share a new preprint from my lab! We characterize the on/off kinetics, light dosage-dependence, and more for a suite of optogenetic signaling activators in zebrafish embryos 💡 www.biorxiv.org/content/10.1...
An optogenetic toolkit for robust activation of FGF, BMP, and Nodal signaling in zebrafish
Cell signaling regulates a wide range of biological processes including development, homeostasis, and disease. Accessible technologies to precisely manipulate signaling have important applications in ...
www.biorxiv.org
April 21, 2025 at 1:47 PM
Reposted by Abhinav Sur
“These findings support the use of zebrafish as a useful comparative model for studying the meninges, provide a foundational description for future zebrafish meningeal research”

New work from @biomarina-vg.bsky.social & Weinstein Lab at NIH 🐟
Anatomical and Molecular Characterization of the Zebrafish Meninges https://www.biorxiv.org/content/10.1101/2025.04.09.646894v1
April 16, 2025 at 4:35 PM
Reposted by Abhinav Sur
Great new work led by @biomarina-vg.bsky.social on zebrafish meninges!

Particularly 🤩 is the descriptions of ependymin-expressing meningeal cells (not a fibroblast!) & ablation studies showing their essential role in viability. So much more to learn!

Congrats Marina & team on this great work! 🦓🐟🧠
April 20, 2025 at 2:40 PM
Reposted by Abhinav Sur
🫀 Zebrafish protein unlocks dormant genes for mammalian heart repair.

Our work published by @springer1842.bsky.social in Nature CVR uncovers how the protein HMGA1 could unlock mammalian heart repair.

rdcu.be/d5owa

#HeartHealth #Regeneration #Biomedicine #Cardiology
January 3, 2025 at 9:56 AM
Reposted by Abhinav Sur
Closing out the year, @cbellegarda.bsky.social and @franziau.bsky.social argue that zebrafish have much to teach us about diversity. Well, diversity among motor neurons that move the eyes, anyway 👀.
Plus read our opinionated takes on current articles too! authors.elsevier.com/a/1kL%7Eb3Q9...
December 30, 2024 at 12:47 PM
Reposted by Abhinav Sur
Signal timing determines transfating outcomes

Read this Research Highlight showcasing work from Alejandro Berrio, David McClay @duke-university.bsky.social and colleagues:
journals.biologists.com/dev/article/...
December 30, 2024 at 1:16 PM
Reposted by Abhinav Sur
Out now in Dev Cell! scRNAseq trajectories describe the cascade of gene expression as cells differentiate, but turning them into a clear understanding of the underlying biology of a cell type's development remains challenging. authors.elsevier.com/c/1k9qj5Sx5g... (1/)
November 26, 2024 at 3:49 PM