Interested in understanding the relationship between 3D genome structure and function
www.nature.com/articles/s41...
www.nature.com/articles/s41...
- 3 techniques: MINFLUX, SPT, SRLCI
- 2 labels: Histone H2B (global, pioneered by @kazu-maeshima.bsky.social ) and Fbn2 locus (local, www.science.org/doi/full/10.... )
- 2 cell lines: human U2OS, mESCs
- 4 perturbations: Loop extrusion, Transcription, Histone Acetylation, Supercoiling
- 3 techniques: MINFLUX, SPT, SRLCI
- 2 labels: Histone H2B (global, pioneered by @kazu-maeshima.bsky.social ) and Fbn2 locus (local, www.science.org/doi/full/10.... )
- 2 cell lines: human U2OS, mESCs
- 4 perturbations: Loop extrusion, Transcription, Histone Acetylation, Supercoiling
Mean Squared Displacement (MSD) should follow power law: MSD ~ time^alpha
fBm simulation shows this: a~0.25 oversamples local environment, whereas Brownian motion a=1 explores more globally.
Mean Squared Displacement (MSD) should follow power law: MSD ~ time^alpha
fBm simulation shows this: a~0.25 oversamples local environment, whereas Brownian motion a=1 explores more globally.