Kayson Fakhar
@kayson.bsky.social
Post-Doc @camneuro.bsky.social | Computational Neuroscience, Neuro-AI, and a bit more.
https://kaysonfakhar.com
https://kaysonfakhar.com
Reposted by Kayson Fakhar
Hidden Markov Models
Speaking of HMMs, really enjoyed this paper on dynamics underlying resting state and other conditions. The idea of a baseline state from which excursions lead to more integrated states is really interesting.
doi.org/10.7554/eLif...
#neuroskyence
Speaking of HMMs, really enjoyed this paper on dynamics underlying resting state and other conditions. The idea of a baseline state from which excursions lead to more integrated states is really interesting.
doi.org/10.7554/eLif...
#neuroskyence
November 9, 2025 at 3:03 PM
Hidden Markov Models
Speaking of HMMs, really enjoyed this paper on dynamics underlying resting state and other conditions. The idea of a baseline state from which excursions lead to more integrated states is really interesting.
doi.org/10.7554/eLif...
#neuroskyence
Speaking of HMMs, really enjoyed this paper on dynamics underlying resting state and other conditions. The idea of a baseline state from which excursions lead to more integrated states is really interesting.
doi.org/10.7554/eLif...
#neuroskyence
Reposted by Kayson Fakhar
Interesting paper on weak standards of evidence in LLM papers. Only 16% use statistics! Half don't define their terms.
www.oii.ox.ac.uk/news-events/...
www.oii.ox.ac.uk/news-events/...
OII | Study identifies weaknesses in how AI systems are evaluated
Largest systematic review of AI benchmarks highlights need for clearer definitions and stronger scientific standards.
www.oii.ox.ac.uk
November 9, 2025 at 9:29 PM
Interesting paper on weak standards of evidence in LLM papers. Only 16% use statistics! Half don't define their terms.
www.oii.ox.ac.uk/news-events/...
www.oii.ox.ac.uk/news-events/...
Reposted by Kayson Fakhar
very nice talk by Joe McCaffrey on functional localization— it’s an easy listen with tons of great information about the debate.
m.youtube.com/watch?v=eRmD...
m.youtube.com/watch?v=eRmD...
Lunchtime Talk - Joe McCaffrey 11/7/25
YouTube video by Center for Philosophy of Science
m.youtube.com
November 9, 2025 at 9:54 PM
very nice talk by Joe McCaffrey on functional localization— it’s an easy listen with tons of great information about the debate.
m.youtube.com/watch?v=eRmD...
m.youtube.com/watch?v=eRmD...
Reposted by Kayson Fakhar
New paper in Imaging Neuroscience by Antoine Dufournet, Jean-François Mangin, et al:
A self-supervised learning framework for discovering cortical folding patterns under genetic influence: Application to the Anterior Cingulate Cortex
doi.org/10.1162/IMAG...
A self-supervised learning framework for discovering cortical folding patterns under genetic influence: Application to the Anterior Cingulate Cortex
doi.org/10.1162/IMAG...
November 7, 2025 at 2:35 PM
New paper in Imaging Neuroscience by Antoine Dufournet, Jean-François Mangin, et al:
A self-supervised learning framework for discovering cortical folding patterns under genetic influence: Application to the Anterior Cingulate Cortex
doi.org/10.1162/IMAG...
A self-supervised learning framework for discovering cortical folding patterns under genetic influence: Application to the Anterior Cingulate Cortex
doi.org/10.1162/IMAG...
Reposted by Kayson Fakhar
Reposted by Kayson Fakhar
New issue of Nature - with NINE studies on #brain #development from the BRAIN Initiative Cell Atlas Network (BICAN) 🧠🧪🔬
An amazing set of resources for all scientists working on the brain!
🧠 Immersive feature:
www.nature.com/immersive/d4...
🧠 Perspective:
www.nature.com/articles/s41...
An amazing set of resources for all scientists working on the brain!
🧠 Immersive feature:
www.nature.com/immersive/d4...
🧠 Perspective:
www.nature.com/articles/s41...
November 5, 2025 at 6:53 PM
New issue of Nature - with NINE studies on #brain #development from the BRAIN Initiative Cell Atlas Network (BICAN) 🧠🧪🔬
An amazing set of resources for all scientists working on the brain!
🧠 Immersive feature:
www.nature.com/immersive/d4...
🧠 Perspective:
www.nature.com/articles/s41...
An amazing set of resources for all scientists working on the brain!
🧠 Immersive feature:
www.nature.com/immersive/d4...
🧠 Perspective:
www.nature.com/articles/s41...
Reposted by Kayson Fakhar
This is 🤯
All publicly available. Looks like an amazing new histology-based human probabilistic atlas and parcellation tool.
#neuroskyence #mri #brainmapping
A probabilistic histological atlas of the human brain for MRI segmentation | Nature share.google/5AD0iW7pxgb4...
All publicly available. Looks like an amazing new histology-based human probabilistic atlas and parcellation tool.
#neuroskyence #mri #brainmapping
A probabilistic histological atlas of the human brain for MRI segmentation | Nature share.google/5AD0iW7pxgb4...
A probabilistic histological atlas of the human brain for MRI segmentation - Nature
NextBrain is an open source, probabilistic atlas of the entire human brain, assembled using artificial-intelligence-enabled registration and segmentation methods to reconstruct the multimodal serial h...
share.google
November 6, 2025 at 5:35 AM
This is 🤯
All publicly available. Looks like an amazing new histology-based human probabilistic atlas and parcellation tool.
#neuroskyence #mri #brainmapping
A probabilistic histological atlas of the human brain for MRI segmentation | Nature share.google/5AD0iW7pxgb4...
All publicly available. Looks like an amazing new histology-based human probabilistic atlas and parcellation tool.
#neuroskyence #mri #brainmapping
A probabilistic histological atlas of the human brain for MRI segmentation | Nature share.google/5AD0iW7pxgb4...
Reposted by Kayson Fakhar
Neonatal brain volumes and birth characteristics predict behavioural outcomes in toddlerhood https://www.biorxiv.org/content/10.1101/2025.11.01.686012v1
November 2, 2025 at 8:15 AM
Neonatal brain volumes and birth characteristics predict behavioural outcomes in toddlerhood https://www.biorxiv.org/content/10.1101/2025.11.01.686012v1
Reposted by Kayson Fakhar
To be clear, have not been able to read the original study because the link does not work. HEre is a fun paper on fourier. www.pnas.org/doi/10.1073/...
Phantom oscillations in principal component analysis | PNAS
Principal component analysis (PCA) is a dimensionality reduction method that is known
for being simple and easy to interpret. Principal components ...
www.pnas.org
October 31, 2025 at 1:14 PM
To be clear, have not been able to read the original study because the link does not work. HEre is a fun paper on fourier. www.pnas.org/doi/10.1073/...
Reposted by Kayson Fakhar
How does a neuron get its activity? 👀
Check out our latest preprint, where we tracked the activity of the same neurons throughout early postnatal development: www.biorxiv.org/content/10.1...
see 🧵 (1/?)
Check out our latest preprint, where we tracked the activity of the same neurons throughout early postnatal development: www.biorxiv.org/content/10.1...
see 🧵 (1/?)
March 3, 2025 at 11:23 AM
How does a neuron get its activity? 👀
Check out our latest preprint, where we tracked the activity of the same neurons throughout early postnatal development: www.biorxiv.org/content/10.1...
see 🧵 (1/?)
Check out our latest preprint, where we tracked the activity of the same neurons throughout early postnatal development: www.biorxiv.org/content/10.1...
see 🧵 (1/?)
Now that Affinity is fully free I think there’s a solid opportunity for academia to let go of Inkscape and get serious about designing good figures 💁🏻♂️
www.affinity.studio/download
www.affinity.studio/download
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www.affinity.studio
November 1, 2025 at 5:28 PM
Now that Affinity is fully free I think there’s a solid opportunity for academia to let go of Inkscape and get serious about designing good figures 💁🏻♂️
www.affinity.studio/download
www.affinity.studio/download
Reposted by Kayson Fakhar
Still beta-testing the app that helps people plan science, make it super clear, design their todos, and write a first version of the paper. Feeling overwhelmed by the countless aspects of doing science? Try this (for free): planyourscience.com
Scientific Paper Planner - AI-Powered Research Planning
Structure your scientific research with AI-powered guidance. From hypothesis to methodology, plan your research paper with intelligent mentoring.
planyourscience.com
October 29, 2025 at 10:06 PM
Still beta-testing the app that helps people plan science, make it super clear, design their todos, and write a first version of the paper. Feeling overwhelmed by the countless aspects of doing science? Try this (for free): planyourscience.com
Reposted by Kayson Fakhar
Enjoyed discussing "Why Science & Philosophy Need Each Other" w Megan Peters @meganakpeters.bsky.social
We discuss the importance of engagement between science & philosophy, our experience w this & simplified conceptions of science & philosophy 🧠📕
Thanks Tev Naidu! #philsky #philsci #sciencesky
We discuss the importance of engagement between science & philosophy, our experience w this & simplified conceptions of science & philosophy 🧠📕
Thanks Tev Naidu! #philsky #philsci #sciencesky
Why Science and Philosophy Need Each Other | Lauren Ross & Megan Peters
YouTube video by Mind-Body Solution
www.youtube.com
October 25, 2025 at 3:52 PM
Enjoyed discussing "Why Science & Philosophy Need Each Other" w Megan Peters @meganakpeters.bsky.social
We discuss the importance of engagement between science & philosophy, our experience w this & simplified conceptions of science & philosophy 🧠📕
Thanks Tev Naidu! #philsky #philsci #sciencesky
We discuss the importance of engagement between science & philosophy, our experience w this & simplified conceptions of science & philosophy 🧠📕
Thanks Tev Naidu! #philsky #philsci #sciencesky
Reposted by Kayson Fakhar
Come listen to John Duncan and myself discussing his new book on 25 Nov. So much insight into the human condition. Definitely not an event to miss!
What does it mean to be both animal and thinker? Join @moatazassem.bsky.social and John Duncan on 25 November at Murray Edwards College for the launch of John’s new book ‘The Animal and the Thinker.’ Get your tickets here: www.eventbrite.co.uk/e/the-animal...
October 22, 2025 at 11:14 AM
Come listen to John Duncan and myself discussing his new book on 25 Nov. So much insight into the human condition. Definitely not an event to miss!
Reposted by Kayson Fakhar
Looking for a PhD? Interested in cognitive computational neuroscience, motivation and decision-making? See our project listed in the BBSRC MIBTP competition for funding for a 4-year PhD in the @msnlab.bsky.social in the @thechbh.bsky.social. Deadline 27/11. More info: tinyurl.com/5d5vz8m7
The computational and neural dynamics of human motivation and cognitive control at University of Birmingham on FindAPhD.com
PhD Project - The computational and neural dynamics of human motivation and cognitive control at University of Birmingham, listed on FindAPhD.com
www.findaphd.com
October 23, 2025 at 9:36 AM
Looking for a PhD? Interested in cognitive computational neuroscience, motivation and decision-making? See our project listed in the BBSRC MIBTP competition for funding for a 4-year PhD in the @msnlab.bsky.social in the @thechbh.bsky.social. Deadline 27/11. More info: tinyurl.com/5d5vz8m7
Reposted by Kayson Fakhar
Is the the neuroimaging community (broadly conceived) submitting to 𝗡𝗲𝘂𝗿𝗼𝗶𝗺𝗮𝗴𝗲 again?????
Not to be publication police but the shift had seemed major 1-2 years ago.
Looking at the editorial board it seems to have serious scientists once more.
Curious about thoughts of the community.
Not to be publication police but the shift had seemed major 1-2 years ago.
Looking at the editorial board it seems to have serious scientists once more.
Curious about thoughts of the community.
October 21, 2025 at 4:16 PM
Is the the neuroimaging community (broadly conceived) submitting to 𝗡𝗲𝘂𝗿𝗼𝗶𝗺𝗮𝗴𝗲 again?????
Not to be publication police but the shift had seemed major 1-2 years ago.
Looking at the editorial board it seems to have serious scientists once more.
Curious about thoughts of the community.
Not to be publication police but the shift had seemed major 1-2 years ago.
Looking at the editorial board it seems to have serious scientists once more.
Curious about thoughts of the community.
Reposted by Kayson Fakhar
Hemispherotomy leads to persistent sleep-like slow waves in the isolated cortex of awake humans | PLOS Biology journals.plos.org/plosbiology/...
Hemispherotomy leads to persistent sleep-like slow waves in the isolated cortex of awake humans
Hemispherotomy is a neurosurgical procedure for treating refractory epilepsy by disconnecting a significant portion of the cortex. This study shows that the isolated cortex exhibits EEG patterns resem...
journals.plos.org
October 21, 2025 at 10:11 PM
Hemispherotomy leads to persistent sleep-like slow waves in the isolated cortex of awake humans | PLOS Biology journals.plos.org/plosbiology/...
Reposted by Kayson Fakhar
The applications for the new round of CaCTüS Internship are now open! This is an extraordinary opportunity for students from underrepresented backgrounds to develop research skills necessary for advancing their careers!
www.projects.tuebingen.mpg.de/application/
www.projects.tuebingen.mpg.de/application/
October 20, 2025 at 7:53 PM
The applications for the new round of CaCTüS Internship are now open! This is an extraordinary opportunity for students from underrepresented backgrounds to develop research skills necessary for advancing their careers!
www.projects.tuebingen.mpg.de/application/
www.projects.tuebingen.mpg.de/application/
Reposted by Kayson Fakhar
Report: Cost Of Raising Neglected Children Still Low As Ever https://theonion.com/report-cost-of-raising-neglected-children-still-low-as-1819577111/
October 20, 2025 at 9:00 PM
Report: Cost Of Raising Neglected Children Still Low As Ever https://theonion.com/report-cost-of-raising-neglected-children-still-low-as-1819577111/
Reposted by Kayson Fakhar
New paper + interactive dashboard on the 2024 election information ecosystem.
Building on discourse networks work with @hanshanley.bsky.social @luceriluc.bsky.social @emilioferrara.bsky.social—this lets us visualize the online landscape as a unified system, rather than isolating each platform.
Building on discourse networks work with @hanshanley.bsky.social @luceriluc.bsky.social @emilioferrara.bsky.social—this lets us visualize the online landscape as a unified system, rather than isolating each platform.
October 20, 2025 at 6:33 PM
New paper + interactive dashboard on the 2024 election information ecosystem.
Building on discourse networks work with @hanshanley.bsky.social @luceriluc.bsky.social @emilioferrara.bsky.social—this lets us visualize the online landscape as a unified system, rather than isolating each platform.
Building on discourse networks work with @hanshanley.bsky.social @luceriluc.bsky.social @emilioferrara.bsky.social—this lets us visualize the online landscape as a unified system, rather than isolating each platform.
Reposted by Kayson Fakhar
Applying new tools to entire brains, starting with C. elegans, offers the opportunity to uncover how molecules work together to generate neural physiology, and how neurons generate behavior, write @kordinglab.bsky.social and @eboyden3.bsky.social.
#neuroskyence
bit.ly/48EzEO8
#neuroskyence
bit.ly/48EzEO8
Whole-brain, bottom-up neuroscience: The time for it is now
Applying new tools to entire brains, starting with C. elegans, offers the opportunity to uncover how molecules work together to generate neural physiology and how neurons work together to generate…
bit.ly
October 20, 2025 at 2:27 PM
Applying new tools to entire brains, starting with C. elegans, offers the opportunity to uncover how molecules work together to generate neural physiology, and how neurons generate behavior, write @kordinglab.bsky.social and @eboyden3.bsky.social.
#neuroskyence
bit.ly/48EzEO8
#neuroskyence
bit.ly/48EzEO8
Reposted by Kayson Fakhar
Work!! 🚨
We are looking for a #postdoc in our AI, media and Democracy Lab @aimediademlab.bsky.social
Dynamic position, great team, nice colleagues 💥
Profile: communication/ poli sci/ computational social sci
🗓️ DL November 1
Spread the word 📣
werkenbij.uva.nl/en/vacancies...
We are looking for a #postdoc in our AI, media and Democracy Lab @aimediademlab.bsky.social
Dynamic position, great team, nice colleagues 💥
Profile: communication/ poli sci/ computational social sci
🗓️ DL November 1
Spread the word 📣
werkenbij.uva.nl/en/vacancies...
Vacancy — Postdoctoral researcher Communication Science at AI, Media & Democracy Lab
Do you want to be part of the AI, Media & Democracy Lab? We are looking for a postdoctoral researcher with a profile in communication science.
werkenbij.uva.nl
October 19, 2025 at 6:33 AM
Work!! 🚨
We are looking for a #postdoc in our AI, media and Democracy Lab @aimediademlab.bsky.social
Dynamic position, great team, nice colleagues 💥
Profile: communication/ poli sci/ computational social sci
🗓️ DL November 1
Spread the word 📣
werkenbij.uva.nl/en/vacancies...
We are looking for a #postdoc in our AI, media and Democracy Lab @aimediademlab.bsky.social
Dynamic position, great team, nice colleagues 💥
Profile: communication/ poli sci/ computational social sci
🗓️ DL November 1
Spread the word 📣
werkenbij.uva.nl/en/vacancies...
Reposted by Kayson Fakhar
Very nice thread, but can't get on board with taking all the panels to external software just for the panel labels and layout 🙅
I always use subplot_mosaic (Tutorial from matplotlib docs: tinyurl.com/3efsadeb) and add the panel labels with fig.text(), no third-party software needed!
I always use subplot_mosaic (Tutorial from matplotlib docs: tinyurl.com/3efsadeb) and add the panel labels with fig.text(), no third-party software needed!
October 20, 2025 at 3:37 PM
Very nice thread, but can't get on board with taking all the panels to external software just for the panel labels and layout 🙅
I always use subplot_mosaic (Tutorial from matplotlib docs: tinyurl.com/3efsadeb) and add the panel labels with fig.text(), no third-party software needed!
I always use subplot_mosaic (Tutorial from matplotlib docs: tinyurl.com/3efsadeb) and add the panel labels with fig.text(), no third-party software needed!
Reposted by Kayson Fakhar
Second attempt, but processing is tough.
This is about 3 min integrated exposure.
This is about 3 min integrated exposure.
October 18, 2025 at 12:49 PM
Second attempt, but processing is tough.
This is about 3 min integrated exposure.
This is about 3 min integrated exposure.