Jonathan Taylor
@jtimaging.bsky.social
Optical physicist tackling biomedical imaging and measurement problems with realtime computation, maths and computational imaging
Sigh. AI's still not there yet
February 11, 2026 at 5:08 PM
Sigh. AI's still not there yet
Watch out for the "conference accommodation" scam emails that have been going around for a while. I was rather disconcerted to get one for the upcoming microscopy conference in Sweden that I *am* attending, but am not speaking at (so not even listed anywhere). How on earth could the spammers know…?
February 11, 2026 at 4:59 PM
Watch out for the "conference accommodation" scam emails that have been going around for a while. I was rather disconcerted to get one for the upcoming microscopy conference in Sweden that I *am* attending, but am not speaking at (so not even listed anywhere). How on earth could the spammers know…?
Yesterday I learned that MS Teams throttles screen-sharing to ~3fps. To override that, you have to know to press an obscure and inscrutably-labelled button, every time. I very nearly gave a crucial online presentation, full of beating hearts, at 3fps without even realising. Stuff of nightmares.
February 3, 2026 at 3:00 PM
Yesterday I learned that MS Teams throttles screen-sharing to ~3fps. To override that, you have to know to press an obscure and inscrutably-labelled button, every time. I very nearly gave a crucial online presentation, full of beating hearts, at 3fps without even realising. Stuff of nightmares.
Reposted by Jonathan Taylor
Job alert! 📣 I’m looking for a research assistant to join my new team @idrm.ox.ac.uk
Were using #zebrafish to understand gene-environment interactions that shape the heart 🫀generate natural diversity 🐸🐭 and contribute to congenital defects ❤️🩹
Full info below, and please share! 🫶🏻
bit.ly/467TO0M
Were using #zebrafish to understand gene-environment interactions that shape the heart 🫀generate natural diversity 🐸🐭 and contribute to congenital defects ❤️🩹
Full info below, and please share! 🫶🏻
bit.ly/467TO0M
February 2, 2026 at 2:01 PM
Job alert! 📣 I’m looking for a research assistant to join my new team @idrm.ox.ac.uk
Were using #zebrafish to understand gene-environment interactions that shape the heart 🫀generate natural diversity 🐸🐭 and contribute to congenital defects ❤️🩹
Full info below, and please share! 🫶🏻
bit.ly/467TO0M
Were using #zebrafish to understand gene-environment interactions that shape the heart 🫀generate natural diversity 🐸🐭 and contribute to congenital defects ❤️🩹
Full info below, and please share! 🫶🏻
bit.ly/467TO0M
@retof.bsky.social, I sometimes think of your wish, some time ago, for everyone to have their own hype-man on stage when they are giving a conference presentation. My Teams meeting transcript from today seems to have completely hallucinated a colleague interjecting "ok. yeah! play the song! okay"
January 28, 2026 at 3:58 PM
@retof.bsky.social, I sometimes think of your wish, some time ago, for everyone to have their own hype-man on stage when they are giving a conference presentation. My Teams meeting transcript from today seems to have completely hallucinated a colleague interjecting "ok. yeah! play the song! okay"
Reposted by Jonathan Taylor
We have two funded postdoctoral positions available. Topics encompass:
-Next gen light-sheet fluorescence microscopy instrumentation
-Structured illumination microscopy and other approaches to extend the resolution limit.
-Nonlinear microscopy combined with adaptive optics / phase conjugation
-Next gen light-sheet fluorescence microscopy instrumentation
-Structured illumination microscopy and other approaches to extend the resolution limit.
-Nonlinear microscopy combined with adaptive optics / phase conjugation
January 27, 2026 at 10:29 PM
We have two funded postdoctoral positions available. Topics encompass:
-Next gen light-sheet fluorescence microscopy instrumentation
-Structured illumination microscopy and other approaches to extend the resolution limit.
-Nonlinear microscopy combined with adaptive optics / phase conjugation
-Next gen light-sheet fluorescence microscopy instrumentation
-Structured illumination microscopy and other approaches to extend the resolution limit.
-Nonlinear microscopy combined with adaptive optics / phase conjugation
Here’s one for the Bayesians: if you are pulled from an avalanche in cardiac arrest after >60 minutes, your chances of survival are higher than if you are pulled from an avalanche in cardiac arrest after <60 minutes 🤯
January 17, 2026 at 7:41 PM
Here’s one for the Bayesians: if you are pulled from an avalanche in cardiac arrest after >60 minutes, your chances of survival are higher than if you are pulled from an avalanche in cardiac arrest after <60 minutes 🤯
Reposted by Jonathan Taylor
A loaded question to scream about...which agarose do you use to mix your beads to measure the PSF? Any brand #lsfm #lightsheet
January 15, 2026 at 6:51 PM
A loaded question to scream about...which agarose do you use to mix your beads to measure the PSF? Any brand #lsfm #lightsheet
Another PhD scholarship opportunity
@uofglasgow.bsky.social
: Black UK-domiciled students can apply for a James McCune Smith PhD www.gla.ac.uk/scholarships...; final application deadline 31st January. Scheme includes external mentors, placements, community-building & networking opportunities.
@uofglasgow.bsky.social
: Black UK-domiciled students can apply for a James McCune Smith PhD www.gla.ac.uk/scholarships...; final application deadline 31st January. Scheme includes external mentors, placements, community-building & networking opportunities.
www.gla.ac.uk
November 19, 2025 at 10:16 AM
Another PhD scholarship opportunity
@uofglasgow.bsky.social
: Black UK-domiciled students can apply for a James McCune Smith PhD www.gla.ac.uk/scholarships...; final application deadline 31st January. Scheme includes external mentors, placements, community-building & networking opportunities.
@uofglasgow.bsky.social
: Black UK-domiciled students can apply for a James McCune Smith PhD www.gla.ac.uk/scholarships...; final application deadline 31st January. Scheme includes external mentors, placements, community-building & networking opportunities.
A great opportunity to come to Glasgow for an interdisciplinary PhD, benefitting from enhanced support and stipend, and a diverse cohort of students alongside you for an inclusive, team experience for your PhD! Please share widely, and spread the word with your undergraduate students.
📣 Applications Now Open!
🌊 Dive into mission-driven interdisciplinary #STEM research with a fully funded 4-year PhD starting Sept 2026
✅ Co-create your project
✅ Enhanced stipend
✅ Cohort-based experience
✅Partner network
📅 Applicant Webinar: Nov 26
👉More info & registration: www.divein.org.uk/apply
🌊 Dive into mission-driven interdisciplinary #STEM research with a fully funded 4-year PhD starting Sept 2026
✅ Co-create your project
✅ Enhanced stipend
✅ Cohort-based experience
✅Partner network
📅 Applicant Webinar: Nov 26
👉More info & registration: www.divein.org.uk/apply
November 19, 2025 at 10:09 AM
A great opportunity to come to Glasgow for an interdisciplinary PhD, benefitting from enhanced support and stipend, and a diverse cohort of students alongside you for an inclusive, team experience for your PhD! Please share widely, and spread the word with your undergraduate students.
Big grant submitted, it's always a good sign when I'm *still* excited about the science even when the grind of the application is over 😀. I sketched this graph on my office whiteboard to explain to people the stress of when the trajectory feels like we won't get to the finish line in time!
November 17, 2025 at 3:00 PM
Big grant submitted, it's always a good sign when I'm *still* excited about the science even when the grind of the application is over 😀. I sketched this graph on my office whiteboard to explain to people the stress of when the trajectory feels like we won't get to the finish line in time!
Reposted by Jonathan Taylor
Did you know zebrafish share many of the same genes as humans?
Gage Crump, PhD, Professor and Vice Chair of Stem Cell Biology and Regenerative Medicine at USC Stem Cell, explains how this tiny fish is helping advance human health research.
@keckschoolusc.bsky.social
Gage Crump, PhD, Professor and Vice Chair of Stem Cell Biology and Regenerative Medicine at USC Stem Cell, explains how this tiny fish is helping advance human health research.
@keckschoolusc.bsky.social
November 7, 2025 at 5:17 PM
Did you know zebrafish share many of the same genes as humans?
Gage Crump, PhD, Professor and Vice Chair of Stem Cell Biology and Regenerative Medicine at USC Stem Cell, explains how this tiny fish is helping advance human health research.
@keckschoolusc.bsky.social
Gage Crump, PhD, Professor and Vice Chair of Stem Cell Biology and Regenerative Medicine at USC Stem Cell, explains how this tiny fish is helping advance human health research.
@keckschoolusc.bsky.social
One thing that always lifts my spirits as the nights draw in is the sound of the geese coming south for the winter. Such cheery, chatty birds. (Watch with sound on)
October 13, 2025 at 5:22 PM
One thing that always lifts my spirits as the nights draw in is the sound of the geese coming south for the winter. Such cheery, chatty birds. (Watch with sound on)
This looks great for learning and improving your research git workflows, "Rather than simply teaching commands, the sessions explore the workflows that make them meaningful". Can connect to the talk online, so no excuses not to join!
🎓 We are pleased to share details of an upcoming hybrid series of short talks featuring #SSIFellow Hui Ling Wong, focusing on practical, research-oriented approaches to using Git. This series of 15-minute talks will run every Tue from 14 Oct to 11 Nov.
www.software.ac.uk/news/upcomin...
www.software.ac.uk/news/upcomin...
October 10, 2025 at 9:34 AM
This looks great for learning and improving your research git workflows, "Rather than simply teaching commands, the sessions explore the workflows that make them meaningful". Can connect to the talk online, so no excuses not to join!
Reposted by Jonathan Taylor
🙌 #FOM2026 takes place in Stockholm 🇸🇪 from 🗓️ March 29 to April 1, exploring the latest innovations & developments in optical microscopy. Apply for financial support - up to 10 candidates from underrepresented backgrounds will be supported. 🔬
More info🔽
www.focusonmicroscopy.org/2026-financi...
More info🔽
www.focusonmicroscopy.org/2026-financi...
October 1, 2025 at 8:49 AM
🙌 #FOM2026 takes place in Stockholm 🇸🇪 from 🗓️ March 29 to April 1, exploring the latest innovations & developments in optical microscopy. Apply for financial support - up to 10 candidates from underrepresented backgrounds will be supported. 🔬
More info🔽
www.focusonmicroscopy.org/2026-financi...
More info🔽
www.focusonmicroscopy.org/2026-financi...
Reposted by Jonathan Taylor
🔵 The Carpentries have recently published a new version of Building Better Research Software, a lesson in The Carpentries Incubator designed to serve as a “next steps” workshop after Software Carpentry. Find out more about it and how to get involved at: www.software.ac.uk/news/calling...
September 18, 2025 at 11:06 AM
🔵 The Carpentries have recently published a new version of Building Better Research Software, a lesson in The Carpentries Incubator designed to serve as a “next steps” workshop after Software Carpentry. Find out more about it and how to get involved at: www.software.ac.uk/news/calling...
Reposted by Jonathan Taylor
🚨Publication alert🚨
My first, first-author paper is now out in @natphoton.nature.com! Our paper describes an iterative spectral unmixing algorithm and eight-channel camera-based hardware we developed enabling unmixing of low SNR live-cell data at video rates. www.nature.com/articles/s41...
My first, first-author paper is now out in @natphoton.nature.com! Our paper describes an iterative spectral unmixing algorithm and eight-channel camera-based hardware we developed enabling unmixing of low SNR live-cell data at video rates. www.nature.com/articles/s41...
Multispectral live-cell imaging with uncompromised spatiotemporal resolution - Nature Photonics
A tree-like arrangement of dichroic mirrors and multiple cameras coupled with an iterative spectral unmixing algorithm enables multispectral imaging of live cells in up to eight spectral channels with...
www.nature.com
September 16, 2025 at 10:20 AM
🚨Publication alert🚨
My first, first-author paper is now out in @natphoton.nature.com! Our paper describes an iterative spectral unmixing algorithm and eight-channel camera-based hardware we developed enabling unmixing of low SNR live-cell data at video rates. www.nature.com/articles/s41...
My first, first-author paper is now out in @natphoton.nature.com! Our paper describes an iterative spectral unmixing algorithm and eight-channel camera-based hardware we developed enabling unmixing of low SNR live-cell data at video rates. www.nature.com/articles/s41...
This is a fantastic read. Entertaining and informative, with some great snark thrown in for good measure
eprint.iacr.org/2025/1237 Factorization using a dog! @dulwichquantum.bsky.social
Replication of Quantum Factorisation Records with an 8-bit Home Computer, an Abacus, and a Dog
This paper presents implementations that match and, where possible, exceed current quantum factorisation records using a VIC-20 8-bit home computer from 1981, an abacus, and a dog. We hope that this ...
eprint.iacr.org
August 28, 2025 at 6:13 PM
This is a fantastic read. Entertaining and informative, with some great snark thrown in for good measure
Does anyone have any experience with building a DIY upconversion/SHG setup to get pulsed blue out of a Ti:Sapph laser (Chameleon)? It seems like it should be fairly straightforward, but I would value any tips people have, or numbers for efficiency level you achieved. Thanks in advance!
August 20, 2025 at 6:38 PM
Does anyone have any experience with building a DIY upconversion/SHG setup to get pulsed blue out of a Ti:Sapph laser (Chameleon)? It seems like it should be fairly straightforward, but I would value any tips people have, or numbers for efficiency level you achieved. Thanks in advance!
A thoughtful account of why version control is essential for research software: "achieving the highest levels of insight and impact requires robust tooling and reproducibility baked into its core"; "...requires code that can handle significant complexity and can evolve" [1/3]
➡️ In our latest blog post #SSIFellow Hui Ling Wong delves deeper into how version control helps to make research more reproducible as discussed in a recent event at @imperialcollegeldn.bsky.social. Read more at www.software.ac.uk/blog/keeping...
July 27, 2025 at 2:00 PM
A thoughtful account of why version control is essential for research software: "achieving the highest levels of insight and impact requires robust tooling and reproducibility baked into its core"; "...requires code that can handle significant complexity and can evolve" [1/3]
I'm delighted to share the news that I've been promoted to (full) Professor. Feeling very thankful for all those who have mentored and supported me over the years, the smart and enthusiastic team I get to work with on cool science, and the colleagues who make Glasgow a great place to work.
June 29, 2025 at 9:09 PM
I'm delighted to share the news that I've been promoted to (full) Professor. Feeling very thankful for all those who have mentored and supported me over the years, the smart and enthusiastic team I get to work with on cool science, and the colleagues who make Glasgow a great place to work.
Some wise words on the use of GenAI in scientific activity. "...that is a tacit admission that the work is not worth being done by the scientist. [...] we’ve yielded the opportunity to think about science, discuss our practice, expand our understanding, spark new ideas and develop as researchers."
A few months ago, Nature published how-to guide for using ChatGPT to write your peer reviews in 30 minutes.
This is, of course, a horrible idea. Here’s my response with @jbakcoleman.bsky.social .
This is, of course, a horrible idea. Here’s my response with @jbakcoleman.bsky.social .
AI, peer review and the human activity of science
When researchers cede their scientific judgement to machines, we lose something important.
www.nature.com
June 26, 2025 at 8:20 AM
Some wise words on the use of GenAI in scientific activity. "...that is a tacit admission that the work is not worth being done by the scientist. [...] we’ve yielded the opportunity to think about science, discuss our practice, expand our understanding, spark new ideas and develop as researchers."
I'm excited to be co-organising a workshop on Imaging Forces & Mechanobiology in Living Tissues @ Imperial College London, Wed 2 July (with @noelresearchlab.bsky.social & @jvermot.bsky.social). Register here forms.cloud.microsoft/e/hakfMEbgRB by 13 Jun (limited spaces; will confirm acceptance asap)
June 6, 2025 at 4:54 PM
I'm excited to be co-organising a workshop on Imaging Forces & Mechanobiology in Living Tissues @ Imperial College London, Wed 2 July (with @noelresearchlab.bsky.social & @jvermot.bsky.social). Register here forms.cloud.microsoft/e/hakfMEbgRB by 13 Jun (limited spaces; will confirm acceptance asap)
Reposted by Jonathan Taylor
As we mark #PrideMonth, we take this moment to celebrate LGBTQ+ identities and also reflect on the ongoing work to make our universities places where every member can thrive.
Thank you to colleagues for co-authoring this powerful piece on Rainbow Office Hours ➡️ gla.ac/3Zio6uv
#OneTeamUofG 🏳️🌈 🏳️⚧️
Thank you to colleagues for co-authoring this powerful piece on Rainbow Office Hours ➡️ gla.ac/3Zio6uv
#OneTeamUofG 🏳️🌈 🏳️⚧️
June 6, 2025 at 11:32 AM
As we mark #PrideMonth, we take this moment to celebrate LGBTQ+ identities and also reflect on the ongoing work to make our universities places where every member can thrive.
Thank you to colleagues for co-authoring this powerful piece on Rainbow Office Hours ➡️ gla.ac/3Zio6uv
#OneTeamUofG 🏳️🌈 🏳️⚧️
Thank you to colleagues for co-authoring this powerful piece on Rainbow Office Hours ➡️ gla.ac/3Zio6uv
#OneTeamUofG 🏳️🌈 🏳️⚧️
Reposted by Jonathan Taylor
#Science Bluesky, do your thing:
We're organising the International Symposium on Mechanobiology (ISMB) 2026 in #Glasgow & we're looking for research groups in Latin America & Africa who are doing great work in #Mechanobiology or adjacent areas.
Can you indicate some names to me?
We're organising the International Symposium on Mechanobiology (ISMB) 2026 in #Glasgow & we're looking for research groups in Latin America & Africa who are doing great work in #Mechanobiology or adjacent areas.
Can you indicate some names to me?
May 30, 2025 at 8:24 PM
#Science Bluesky, do your thing:
We're organising the International Symposium on Mechanobiology (ISMB) 2026 in #Glasgow & we're looking for research groups in Latin America & Africa who are doing great work in #Mechanobiology or adjacent areas.
Can you indicate some names to me?
We're organising the International Symposium on Mechanobiology (ISMB) 2026 in #Glasgow & we're looking for research groups in Latin America & Africa who are doing great work in #Mechanobiology or adjacent areas.
Can you indicate some names to me?