HORIUCHI Yuta
hrio.me
HORIUCHI Yuta
@hrio.me
お名前.comからCloudflareに移管
January 17, 2025 at 5:01 AM
Reposted by HORIUCHI Yuta
Delighted to announce the 18th #FASEB Mechanisms of Plants Development will take place Aug 24-28th. ‼️ Register before June 29th → tinyurl.com/24fsjq6a
🌱 🎁 Vote for the conference image by Jan 31st
tinyurl.com/2872w6vm
The poster & speakers lineup will be announced in early Feb.
Spread the word!
January 8, 2025 at 8:51 PM
Reposted by HORIUCHI Yuta
Dear #Physcomitrium community, why would you use BCDAT as an all-purpose growth medium?

It’s a great option for promoting protonema growth ahead of protoplast production. However, it might not be ideal to provide plants with 5 mM ammonium tartrate (AT) for other research applications #plantscience
November 17, 2024 at 9:08 AM
Skythrowのテスト
June 28, 2024 at 12:18 PM
Reposted by HORIUCHI Yuta
New Article: "A non-canonical BZR/BES transcription factor regulates the development of haploid reproductive organs in Marchantia polymorpha" rdcu.be/dEsk8

With News & Views: "Reproductive development: An old mission revealed for BZRs" rdcu.be/dEslm

#PlantScience
April 11, 2024 at 11:40 AM
Reposted by HORIUCHI Yuta
Spring (phenological) arrived anomalously early across much of the contiguous United States. It was even record early for some areas along the northern gradient of the onset maps.

+ Monitor: usanpn.org/news/spring
+ Future projections: link.springer.com/article/10.1...
March 31, 2024 at 12:49 PM
Reposted by HORIUCHI Yuta
The landscape of transcription factor promoter activity during vegetative development in Marchantia.

Reporter fusions for most TF promoters, analysed expression patterns in Marchantia gemmae & build a map of expression domains to find key TFs in the stem cell zone

academic.oup.com/plcell/advan...
The landscape of transcription factor promoter activity during vegetative development in Marchantia
A collection of promoters was systematically derived from transcription factor genes in Marchantia polymorpha and used to build a precise map of cell fates in v
academic.oup.com
February 23, 2024 at 7:54 PM
Reposted by HORIUCHI Yuta
Super useful collection of computational tools that enable the accurate implementation of 3D segmentation of nuclei in a broad range of samples.
www.biorxiv.org/content/10.1...
February 22, 2024 at 11:14 AM
Reposted by HORIUCHI Yuta
Thanks @plantteaching.bsky.social for featuring our review this week! I love the quote you found from Claude: “We have entered the cell, the mansion of our birth, and started the inventory of our acquired wealth.”🏡🔬

Plant Science Research Weekly:
plantae.org/plant-scienc...

🧪🌾🧶🧬
February 16, 2024 at 9:37 AM
Reposted by HORIUCHI Yuta
New Article: "A designer synthetic chromosome fragment functions in moss" rdcu.be/dxdbV

... redesigned and replaced a 155 kb chromosomal region with synthetic sequence in Physcomitrium patens. The simplified sequence obtains the correct epigenetic landscape.

#PlantScience
January 29, 2024 at 1:47 PM
Reposted by HORIUCHI Yuta
New Physco genome. Now definitely 26 chromosomes, not 27 chromosomes
Near telomere-to-telomere genome of the model plant Physcomitrium patens
www.nature.com/articles/s41...
Near telomere-to-telomere genome of the model plant Physcomitrium patens - Nature Plants
The near telomere-to-telomere genome of Physcomitrium patens reveals 26 chromosomes and new genome structures, while also identifying new telomeres, an improved chromosomal karyotype model and intrigu...
www.nature.com
January 29, 2024 at 9:35 AM
Reposted by HORIUCHI Yuta
ggPlantmap
github.com/leonardojo/g...

Convert Icy-traced Plant images into ggPlot
Integrable with bulk or sc-RNAseq data
Generate .svg for Plant eFP viewer

@jxbotany.bsky.social 2024
academic.oup.com/jxb/advance-...
February 13, 2024 at 4:05 AM
名前の順番を検討中
February 9, 2024 at 4:21 AM
Google検索したら、しましょさんのこの記事に辿り着いたので実行できました。感謝。

私の場合独自ドメインは持ってなかったので取得するところからでした。
February 8, 2024 at 7:37 PM
Reposted by HORIUCHI Yuta
aRt: Building a root barrier. Built using: ggPlantmap and rayshader #plantbio #bioart
February 7, 2024 at 11:23 AM
Reposted by HORIUCHI Yuta
Happy to announce our first paper in 2024:
Multifactorial analysis of terminator performance on heterologous gene expression in Physcomitrella.
First first-author paper of Alex Niederau out in Plant Cell Reports.
link.springer.com/article/10.1...
Multifactorial analysis of terminator performance on heterologous gene expression in Physcomitrella ...
Key message Characterization of Physcomitrella 3′UTRs across different promoters yields endogenous single and double terminators for usage in molecular pharming. Abstract The production of recombina...
link.springer.com
January 22, 2024 at 8:48 AM
わりとアカデミアの人いる
Twitterから移籍できそう
January 5, 2024 at 1:00 AM