Javier Brumós
@jbrumos.bsky.social
Molecular biologist interested in Science, Technology, Plants, Genetics...
Reposted by Javier Brumós
orthogene: a Bioconductor package to easily map genes within and across hundreds of species www.biorxiv.org/content/10.6... #Rstats bioconductor.org/packages/ort...
January 22, 2026 at 3:01 PM
orthogene: a Bioconductor package to easily map genes within and across hundreds of species www.biorxiv.org/content/10.6... #Rstats bioconductor.org/packages/ort...
Transgene-free edited plants in one generation, clever approach!
Chimeric RNA resulting from Cas9 & guide RNA transcripts fusion to tRNA-like sequence motifs moves from transgenic rootstocks to grafted wild-type shoots producing heritable edited genes #PlantScience
www.nature.com/articles/s41...
Chimeric RNA resulting from Cas9 & guide RNA transcripts fusion to tRNA-like sequence motifs moves from transgenic rootstocks to grafted wild-type shoots producing heritable edited genes #PlantScience
www.nature.com/articles/s41...
Heritable transgene-free genome editing in plants by grafting of wild-type shoots to transgenic donor rootstocks - Nature Biotechnology
Gene-edited plants free of CRISPR-associated sequences are generated by grafting.
www.nature.com
January 22, 2026 at 4:49 PM
Transgene-free edited plants in one generation, clever approach!
Chimeric RNA resulting from Cas9 & guide RNA transcripts fusion to tRNA-like sequence motifs moves from transgenic rootstocks to grafted wild-type shoots producing heritable edited genes #PlantScience
www.nature.com/articles/s41...
Chimeric RNA resulting from Cas9 & guide RNA transcripts fusion to tRNA-like sequence motifs moves from transgenic rootstocks to grafted wild-type shoots producing heritable edited genes #PlantScience
www.nature.com/articles/s41...
Reposted by Javier Brumós
7th International Conference on Plant Molecular Farming. 13–15 May 2026. Valencia, Spain
@ispmf.bsky.social 2026
www.ispmf2026valencia.org
@ispmf.bsky.social 2026
www.ispmf2026valencia.org
ISPMF 2026 Valencia
Plant Molecular Farming is entering a new era, with breakthroughs in synthetic biology, genome editing, and biomanufacturing driving innovation across healthcare, agriculture, and sustainable industry...
www.ispmf2026valencia.org
January 15, 2026 at 9:37 AM
7th International Conference on Plant Molecular Farming. 13–15 May 2026. Valencia, Spain
@ispmf.bsky.social 2026
www.ispmf2026valencia.org
@ispmf.bsky.social 2026
www.ispmf2026valencia.org
Reposted by Javier Brumós
Want to get the data out of a PDF figure? As in, the actual data – not a rough trace-along-the-lines version?
I made an app you might like: adamkucharski.github.io/pdf2plot/
It all started a few years ago... 🧵
I made an app you might like: adamkucharski.github.io/pdf2plot/
It all started a few years ago... 🧵
January 13, 2026 at 9:12 PM
Want to get the data out of a PDF figure? As in, the actual data – not a rough trace-along-the-lines version?
I made an app you might like: adamkucharski.github.io/pdf2plot/
It all started a few years ago... 🧵
I made an app you might like: adamkucharski.github.io/pdf2plot/
It all started a few years ago... 🧵
From big data to mechanistic insights: decoding plant complexity with models.
Combination of AI with mechanistic models is transforming temporal, image-based, & spatial omics data into detailed predictions of robust plant traits. #PlantScience
www.sciencedirect.com/science/arti...
Combination of AI with mechanistic models is transforming temporal, image-based, & spatial omics data into detailed predictions of robust plant traits. #PlantScience
www.sciencedirect.com/science/arti...
From big data to mechanistic insights: decoding plant complexity with models
Recent advances in high-throughput sequencing, imaging, and phenotyping have carried plant science into the era of ‘big data.’ Complex, multi-scale da…
www.sciencedirect.com
January 13, 2026 at 11:21 AM
From big data to mechanistic insights: decoding plant complexity with models.
Combination of AI with mechanistic models is transforming temporal, image-based, & spatial omics data into detailed predictions of robust plant traits. #PlantScience
www.sciencedirect.com/science/arti...
Combination of AI with mechanistic models is transforming temporal, image-based, & spatial omics data into detailed predictions of robust plant traits. #PlantScience
www.sciencedirect.com/science/arti...
Communication is a two-way street. A sender emits a cue that is perceived and triggers a change in the receiver's behavior. Plants perceive information regarding light, water, nutrients, touch, herbivores, pathogens... Plants also emit cues perceived by others. #PlantScience
doi.org/10.1146/annu...
doi.org/10.1146/annu...
Plant Communication
Communication occurs when a sender emits a cue perceived by a receiver that changes the receiver's behavior. Plants perceive information regarding light, water, other nutrients, touch, herbivores...
doi.org
January 11, 2026 at 11:55 AM
Communication is a two-way street. A sender emits a cue that is perceived and triggers a change in the receiver's behavior. Plants perceive information regarding light, water, nutrients, touch, herbivores, pathogens... Plants also emit cues perceived by others. #PlantScience
doi.org/10.1146/annu...
doi.org/10.1146/annu...
These 99 'lab hacks' will make your scientific work easier www.nature.com/articles/d41...
These 99 'lab hacks' will make your scientific work easier
Nature asked contributors, editors and working researchers to share their best advice for scientists.
www.nature.com
December 25, 2025 at 4:36 PM
These 99 'lab hacks' will make your scientific work easier www.nature.com/articles/d41...
Reposted by Javier Brumós
It's our birthday! Twenty-five years ago, in December 2000, the Arabidopsis thaliana genome was published and #TAIR was born.
Now, we're preparing for the release of #TAIR12 early in the new year. What a long way we've come!
bit.ly/3KDJciT
#plantbiology #plantscience #genomics #Arabidopsis
Now, we're preparing for the release of #TAIR12 early in the new year. What a long way we've come!
bit.ly/3KDJciT
#plantbiology #plantscience #genomics #Arabidopsis
Get ready: TAIR12 is coming - Phoenix Bioinformatics
More than two years ago, TAIR took the lead in a volunteer-driven project to reannotate the Arabidopsis thaliana genome
bit.ly
December 18, 2025 at 5:32 PM
It's our birthday! Twenty-five years ago, in December 2000, the Arabidopsis thaliana genome was published and #TAIR was born.
Now, we're preparing for the release of #TAIR12 early in the new year. What a long way we've come!
bit.ly/3KDJciT
#plantbiology #plantscience #genomics #Arabidopsis
Now, we're preparing for the release of #TAIR12 early in the new year. What a long way we've come!
bit.ly/3KDJciT
#plantbiology #plantscience #genomics #Arabidopsis
😭😭😭
‼️ÚLTIMA HORA | Muere Robe Iniesta, líder de Extremoduro, a los 63 años: “Hoy despedimos al maestro de maestros”
Muere Robe Iniesta, líder de Extremoduro, a los 63 años
"Hoy despedimos al maestro de maestros", reza el comunicado de su agencia de comunicación al informar de su fallecimiento
www.eldiario.es
December 10, 2025 at 6:24 PM
😭😭😭
Reposted by Javier Brumós
From the Science Communication Lab: a new mini documentary highlighting my lab’s work on roots and their environmental responses! Beautiful videography helps to communicate the wonder of this hidden world of plants below our feet. youtu.be/vqZ3LT8sCIQ?...
The Hidden World of Plant Roots with Stanford Biologist José R. Dinneny
YouTube video by Science Communication Lab
youtu.be
December 10, 2025 at 7:03 AM
From the Science Communication Lab: a new mini documentary highlighting my lab’s work on roots and their environmental responses! Beautiful videography helps to communicate the wonder of this hidden world of plants below our feet. youtu.be/vqZ3LT8sCIQ?...
Reposted by Javier Brumós
Join us in Málaga!
🎉 The PGRP2026 website is live & registration is OPEN!
👉 malaga-en.congresoseci.com/pgrp2026/index
Check out our amazing lineup of speakers
Don’t miss out: we´ll also select speakers from submitted abstracts ❗️
Hurry up! we have limited seats!
Join us in Málaga, Oct 5–7, 2026 🌞
👉 malaga-en.congresoseci.com/pgrp2026/index
Check out our amazing lineup of speakers
Don’t miss out: we´ll also select speakers from submitted abstracts ❗️
Hurry up! we have limited seats!
Join us in Málaga, Oct 5–7, 2026 🌞
November 27, 2025 at 2:15 PM
Join us in Málaga!
🎙️🌱 ¡La presentación del proyecto PUA fue un éxito rotundo! 🚀
Hemos compartido los resultados sobre la emisión de ultrasonidos por las plantas.
Gracias a todos por participar en esta jornada de ciencia, arte y filosofía que busca redefinir nuestra concepción de las plantas.
Hemos compartido los resultados sobre la emisión de ultrasonidos por las plantas.
Gracias a todos por participar en esta jornada de ciencia, arte y filosofía que busca redefinir nuestra concepción de las plantas.
November 29, 2025 at 11:27 AM
🎙️🌱 ¡La presentación del proyecto PUA fue un éxito rotundo! 🚀
Hemos compartido los resultados sobre la emisión de ultrasonidos por las plantas.
Gracias a todos por participar en esta jornada de ciencia, arte y filosofía que busca redefinir nuestra concepción de las plantas.
Hemos compartido los resultados sobre la emisión de ultrasonidos por las plantas.
Gracias a todos por participar en esta jornada de ciencia, arte y filosofía que busca redefinir nuestra concepción de las plantas.
Reposted by Javier Brumós
Ven a **La Casa Encendida**, 27 nov, 18:00 h, y experimenta cómo la IA hace audible la inteligencia vegetal.
Aprender, sentir y repensar nuestro vínculo con la vida que nos rodea www.upv.es/noticias-upv...
#Escuchar #Posthumanismo #InteligenciaVegetal #ArteCiencia #FuturoSostenible
Aprender, sentir y repensar nuestro vínculo con la vida que nos rodea www.upv.es/noticias-upv...
#Escuchar #Posthumanismo #InteligenciaVegetal #ArteCiencia #FuturoSostenible
November 25, 2025 at 10:41 AM
Ven a **La Casa Encendida**, 27 nov, 18:00 h, y experimenta cómo la IA hace audible la inteligencia vegetal.
Aprender, sentir y repensar nuestro vínculo con la vida que nos rodea www.upv.es/noticias-upv...
#Escuchar #Posthumanismo #InteligenciaVegetal #ArteCiencia #FuturoSostenible
Aprender, sentir y repensar nuestro vínculo con la vida que nos rodea www.upv.es/noticias-upv...
#Escuchar #Posthumanismo #InteligenciaVegetal #ArteCiencia #FuturoSostenible
How do Xylem-Pole-Pericycle cells decide between forming a new Lateral Root or contributing to cambium formation & secondary growth?
Cytokinins facilitate cambium development & reduce LR potency, shaping the entire root architecture!
@apmahonen.bsky.social
doi.org/10.1016/j.mo...
#PlantScience
Cytokinins facilitate cambium development & reduce LR potency, shaping the entire root architecture!
@apmahonen.bsky.social
doi.org/10.1016/j.mo...
#PlantScience
November 25, 2025 at 2:29 PM
How do Xylem-Pole-Pericycle cells decide between forming a new Lateral Root or contributing to cambium formation & secondary growth?
Cytokinins facilitate cambium development & reduce LR potency, shaping the entire root architecture!
@apmahonen.bsky.social
doi.org/10.1016/j.mo...
#PlantScience
Cytokinins facilitate cambium development & reduce LR potency, shaping the entire root architecture!
@apmahonen.bsky.social
doi.org/10.1016/j.mo...
#PlantScience
Research feels more like a hobby than work. It is like kids solving puzzles to reveal messages with important implications for knowledge & potentially for the sustainability of our planet
Roberto Solano @cnb-csic.bsky.social
@newphyt.bsky.social
nph.onlinelibrary.wiley.com/doi/10.1111/...
Roberto Solano @cnb-csic.bsky.social
@newphyt.bsky.social
nph.onlinelibrary.wiley.com/doi/10.1111/...
Roberto Solano
Roberto Solano, National Biotechnology Center, CSIC (Spain).
nph.onlinelibrary.wiley.com
November 25, 2025 at 2:07 PM
Research feels more like a hobby than work. It is like kids solving puzzles to reveal messages with important implications for knowledge & potentially for the sustainability of our planet
Roberto Solano @cnb-csic.bsky.social
@newphyt.bsky.social
nph.onlinelibrary.wiley.com/doi/10.1111/...
Roberto Solano @cnb-csic.bsky.social
@newphyt.bsky.social
nph.onlinelibrary.wiley.com/doi/10.1111/...
Reposted by Javier Brumós
And now we have Arabidopsis plants with 8 chromosomes instead of 10 and no obvious phenotypic differences, this week in @science.org
#PlantScience
Paper here: www.science.org/doi/10.1126/...
Perspective here:
www.science.org/doi/10.1126/...
#PlantScience
Paper here: www.science.org/doi/10.1126/...
Perspective here:
www.science.org/doi/10.1126/...
CRISPR-Cas–mediated heritable chromosome fusions in Arabidopsis
The genome of Arabidopsis thaliana consists of 10 chromosomes. By inducing CRISPR-Cas–mediated breaks at subcentromeric and subtelomeric sequences, we fused entire chromosome arms, obtaining two eight...
www.science.org
November 21, 2025 at 10:20 AM
And now we have Arabidopsis plants with 8 chromosomes instead of 10 and no obvious phenotypic differences, this week in @science.org
#PlantScience
Paper here: www.science.org/doi/10.1126/...
Perspective here:
www.science.org/doi/10.1126/...
#PlantScience
Paper here: www.science.org/doi/10.1126/...
Perspective here:
www.science.org/doi/10.1126/...
Reposted by Javier Brumós
Escucha lo inaudible: las plantas también tienen voces. El proyecto PUA combina #arte, #ciencia y #filosofía para repensar nuestra relación con nuestro entorno.
📍 La Casa Encendida | 27 nov, 18:00 h | entrada libre
www.lacasaencendida.es/encuentros/u...
#InteligenciaVegetal #Escuchar #Posthumanismo
📍 La Casa Encendida | 27 nov, 18:00 h | entrada libre
www.lacasaencendida.es/encuentros/u...
#InteligenciaVegetal #Escuchar #Posthumanismo
November 17, 2025 at 4:28 PM
Escucha lo inaudible: las plantas también tienen voces. El proyecto PUA combina #arte, #ciencia y #filosofía para repensar nuestra relación con nuestro entorno.
📍 La Casa Encendida | 27 nov, 18:00 h | entrada libre
www.lacasaencendida.es/encuentros/u...
#InteligenciaVegetal #Escuchar #Posthumanismo
📍 La Casa Encendida | 27 nov, 18:00 h | entrada libre
www.lacasaencendida.es/encuentros/u...
#InteligenciaVegetal #Escuchar #Posthumanismo
Reposted by Javier Brumós
Our lab is seeking candidates to apply for a 3-year postdoctoral fellowship in the area of plant synthetic biology funded by the Spanish Research Council. Deadline for applications is 17 Dec. Please, spread the word! contact: k.wabnik@upm.es
November 18, 2025 at 11:11 AM
Our lab is seeking candidates to apply for a 3-year postdoctoral fellowship in the area of plant synthetic biology funded by the Spanish Research Council. Deadline for applications is 17 Dec. Please, spread the word! contact: k.wabnik@upm.es
Reposted by Javier Brumós
By combining molecular genetics with cell-ablation experiments, we found that vascular cambium stem cells and xylem-identity cells form an interchangeable unit, a stem cell niche. Meticulous work by @xixizhang9001.bsky.social, Ondrej Smetana, Jing Zhang & Xiaoyu Wang 1/x www.pnas.org/doi/10.1073/...
Auxin transport positions stem cells in the vascular cambium during normal development and regeneration | PNAS
The vascular cambium contains bifacial stem cells producing secondary phloem in one
and secondary xylem to the opposite direction. In Arabidopsis r...
www.pnas.org
November 14, 2025 at 9:30 AM
By combining molecular genetics with cell-ablation experiments, we found that vascular cambium stem cells and xylem-identity cells form an interchangeable unit, a stem cell niche. Meticulous work by @xixizhang9001.bsky.social, Ondrej Smetana, Jing Zhang & Xiaoyu Wang 1/x www.pnas.org/doi/10.1073/...
Reposted by Javier Brumós
Single-cell and spatial omics reveal progressive loss of xylem developmental complexity across seed plants (Peng Shuai, Jo-Wei Allison Hsieh, et al) doi.org/10.1093/plce... #PlantScience @aspbofficial
Single-cell and spatial omics reveal progressive loss of xylem developmental complexity across seed plants
Single-cell and spatial omics in conifers uncover conserved radial lineages but divergent axial trajectories with angiosperm-like and gymnosperm-specific f
doi.org
November 12, 2025 at 7:52 PM
Single-cell and spatial omics reveal progressive loss of xylem developmental complexity across seed plants (Peng Shuai, Jo-Wei Allison Hsieh, et al) doi.org/10.1093/plce... #PlantScience @aspbofficial
Reposted by Javier Brumós
📢 27 NOV · La Casa Encendida
Evento: Ultrasonidos de plantas, inteligencia vegetal e IA
Organiza @puaproject.bsky.social con @ibmcp.bsky.social, @tallerestampa.bsky.social y @fundacioncarasso.bsky.social
#PUAproject #ArteCiencia #Posthumanismo redacts.org/ultrasonidos...
Evento: Ultrasonidos de plantas, inteligencia vegetal e IA
Organiza @puaproject.bsky.social con @ibmcp.bsky.social, @tallerestampa.bsky.social y @fundacioncarasso.bsky.social
#PUAproject #ArteCiencia #Posthumanismo redacts.org/ultrasonidos...
Ultrasonidos de plantas: inteligencia vegetal e IA. El proyecto de Arte/Ciencia PUA (Plant Ultrasound Atlas) – redActs
¿Podemos escuchar a las plantas? Un encuentro entre arte, ciencia y filosofía donde investigadores y artistas exploran los sonidos inaudibles de las plantas mediante inteligencia artificial para cuest...
redacts.org
November 11, 2025 at 9:38 PM
📢 27 NOV · La Casa Encendida
Evento: Ultrasonidos de plantas, inteligencia vegetal e IA
Organiza @puaproject.bsky.social con @ibmcp.bsky.social, @tallerestampa.bsky.social y @fundacioncarasso.bsky.social
#PUAproject #ArteCiencia #Posthumanismo redacts.org/ultrasonidos...
Evento: Ultrasonidos de plantas, inteligencia vegetal e IA
Organiza @puaproject.bsky.social con @ibmcp.bsky.social, @tallerestampa.bsky.social y @fundacioncarasso.bsky.social
#PUAproject #ArteCiencia #Posthumanismo redacts.org/ultrasonidos...
Reposted by Javier Brumós
Investigadores del IBMCP lideran proyecto de Arte/Ciencia sobre ultrasonidos de plantas financiado por @fundacioncarasso.bsky.social y con participación de @tallerestampa.bsky.social y @vrainupv.bsky.social que se presenta el próximo 27Nov en @casaencendida.bsky.social
ibmcp.upv.es/ultrasonidos...
ibmcp.upv.es/ultrasonidos...
November 6, 2025 at 12:44 PM
Investigadores del IBMCP lideran proyecto de Arte/Ciencia sobre ultrasonidos de plantas financiado por @fundacioncarasso.bsky.social y con participación de @tallerestampa.bsky.social y @vrainupv.bsky.social que se presenta el próximo 27Nov en @casaencendida.bsky.social
ibmcp.upv.es/ultrasonidos...
ibmcp.upv.es/ultrasonidos...
El proximo 27 de noviembre presentamos en #LaCasaEncendida, Madrid
www.lacasaencendida.es/encuentros/u...
nuestro proyecto Arte/Ciencia financiado por @fundacioncarasso.bsky.social en el cual intentamos escuchar y entender a las plantas empleando IA
pua.webs.upv.es
www.lacasaencendida.es/encuentros/u...
nuestro proyecto Arte/Ciencia financiado por @fundacioncarasso.bsky.social en el cual intentamos escuchar y entender a las plantas empleando IA
pua.webs.upv.es
October 29, 2025 at 2:19 PM
El proximo 27 de noviembre presentamos en #LaCasaEncendida, Madrid
www.lacasaencendida.es/encuentros/u...
nuestro proyecto Arte/Ciencia financiado por @fundacioncarasso.bsky.social en el cual intentamos escuchar y entender a las plantas empleando IA
pua.webs.upv.es
www.lacasaencendida.es/encuentros/u...
nuestro proyecto Arte/Ciencia financiado por @fundacioncarasso.bsky.social en el cual intentamos escuchar y entender a las plantas empleando IA
pua.webs.upv.es
¿Podemos escuchar y entender a las plantas?
Intentamos responder a esta pregunta utilizando IA como puente entre las inteligencias vegetal y humana en nuestro proyecto de Arte/Ciencia
#LaCasaEncendida, Madrid, 27 de noviembre 2025
@puaproject.bsky.social
www.lacasaencendida.es/encuentros/u...
Intentamos responder a esta pregunta utilizando IA como puente entre las inteligencias vegetal y humana en nuestro proyecto de Arte/Ciencia
#LaCasaEncendida, Madrid, 27 de noviembre 2025
@puaproject.bsky.social
www.lacasaencendida.es/encuentros/u...
October 7, 2025 at 10:27 AM
¿Podemos escuchar y entender a las plantas?
Intentamos responder a esta pregunta utilizando IA como puente entre las inteligencias vegetal y humana en nuestro proyecto de Arte/Ciencia
#LaCasaEncendida, Madrid, 27 de noviembre 2025
@puaproject.bsky.social
www.lacasaencendida.es/encuentros/u...
Intentamos responder a esta pregunta utilizando IA como puente entre las inteligencias vegetal y humana en nuestro proyecto de Arte/Ciencia
#LaCasaEncendida, Madrid, 27 de noviembre 2025
@puaproject.bsky.social
www.lacasaencendida.es/encuentros/u...
Vascular development 2025 meeting ended with a great award ceremony.
Congratulations to the awardees! 👏🏼👏🏼👏🏼
Best talk @jalonsos.bsky.social
Best poster: Linh Thi Nguyen from Enrico Scarpella lab
Thanks to the people from @bertderybel.bsky.social group for all their work to make this meeting possible
Congratulations to the awardees! 👏🏼👏🏼👏🏼
Best talk @jalonsos.bsky.social
Best poster: Linh Thi Nguyen from Enrico Scarpella lab
Thanks to the people from @bertderybel.bsky.social group for all their work to make this meeting possible
June 16, 2025 at 5:18 AM
Vascular development 2025 meeting ended with a great award ceremony.
Congratulations to the awardees! 👏🏼👏🏼👏🏼
Best talk @jalonsos.bsky.social
Best poster: Linh Thi Nguyen from Enrico Scarpella lab
Thanks to the people from @bertderybel.bsky.social group for all their work to make this meeting possible
Congratulations to the awardees! 👏🏼👏🏼👏🏼
Best talk @jalonsos.bsky.social
Best poster: Linh Thi Nguyen from Enrico Scarpella lab
Thanks to the people from @bertderybel.bsky.social group for all their work to make this meeting possible