Gabriel Ramírez-Vilchis
@gabrielramirezv.bsky.social
🌐 https://gabrielramirezv.github.io/
Undergraduate student in Genomic Sciences at #LCG-UNAM 🧬🇲🇽.
I am interested in immunology 🛡️, neuroscience 🧠 and machine learning 👨🏻💻.
Undergraduate student in Genomic Sciences at #LCG-UNAM 🧬🇲🇽.
I am interested in immunology 🛡️, neuroscience 🧠 and machine learning 👨🏻💻.
Today I had the opportunity to teach as a guest instructor in a bioinformatics course at #LCG-UNAM 👨🏻💻.
We built academic websites with #postcards (thanks @seankross.com!), inspired by @hadley.nz and @jtleek.bsky.social.
Thanks to Dr. @lcolladotor.bsky.social for the invitation! 🚀
#RStats
We built academic websites with #postcards (thanks @seankross.com!), inspired by @hadley.nz and @jtleek.bsky.social.
Thanks to Dr. @lcolladotor.bsky.social for the invitation! 🚀
#RStats
February 13, 2026 at 3:22 AM
Today I had the opportunity to teach as a guest instructor in a bioinformatics course at #LCG-UNAM 👨🏻💻.
We built academic websites with #postcards (thanks @seankross.com!), inspired by @hadley.nz and @jtleek.bsky.social.
Thanks to Dr. @lcolladotor.bsky.social for the invitation! 🚀
#RStats
We built academic websites with #postcards (thanks @seankross.com!), inspired by @hadley.nz and @jtleek.bsky.social.
Thanks to Dr. @lcolladotor.bsky.social for the invitation! 🚀
#RStats
An insightful lecture by Dr. Edith González Guevara in #ApplicationsOfGenomics at #LCG-UNAM 🧬.
Particularly interesting to see alternative approaches to #Huntington’s disease alongside research on #diabetes and #epilepsy models 🧠.
Particularly interesting to see alternative approaches to #Huntington’s disease alongside research on #diabetes and #epilepsy models 🧠.
February 13, 2026 at 2:14 AM
An insightful lecture by Dr. Edith González Guevara in #ApplicationsOfGenomics at #LCG-UNAM 🧬.
Particularly interesting to see alternative approaches to #Huntington’s disease alongside research on #diabetes and #epilepsy models 🧠.
Particularly interesting to see alternative approaches to #Huntington’s disease alongside research on #diabetes and #epilepsy models 🧠.
Looking forward to contributing to a course session this week at #LCG-UNAM 👨🏻💻
Grateful for the opportunity to learn through teaching! 😊
Grateful for the opportunity to learn through teaching! 😊
lcolladotor.github.io/rnaseq_LCG-U... is looking ready for next week!
We'll have the most guest presenters ever this year with @meli-mq99.bsky.social @gabrielramirezv.bsky.social @mariagtac.bsky.social & @daiannaglez.bsky.social 🙌🏽
See you soon at LCG-UNAM! 🇲🇽
#RStats @bioconductor.bsky.social
We'll have the most guest presenters ever this year with @meli-mq99.bsky.social @gabrielramirezv.bsky.social @mariagtac.bsky.social & @daiannaglez.bsky.social 🙌🏽
See you soon at LCG-UNAM! 🇲🇽
#RStats @bioconductor.bsky.social
February 10, 2026 at 4:12 AM
Looking forward to contributing to a course session this week at #LCG-UNAM 👨🏻💻
Grateful for the opportunity to learn through teaching! 😊
Grateful for the opportunity to learn through teaching! 😊
It was a real pleasure to meet Dr. @jazminrm.bsky.social during the #FrontiersInGenomics program at #LCG-UNAM!
I truly appreciate everything she shared with us about maize domestication 🌽 and life in science 🔬!
I truly appreciate everything she shared with us about maize domestication 🌽 and life in science 🔬!
November 15, 2025 at 4:54 PM
It was a real pleasure to meet Dr. @jazminrm.bsky.social during the #FrontiersInGenomics program at #LCG-UNAM!
I truly appreciate everything she shared with us about maize domestication 🌽 and life in science 🔬!
I truly appreciate everything she shared with us about maize domestication 🌽 and life in science 🔬!
A month ago we presented our work at the XXVI National Congress of Immunology in Chihuahua, Mexico 🇲🇽, organized by @sminmunologia.bsky.social. It has been wonderful to share what we have learned about sialomucin CD43 🧬 in erythroid differentiation 🩸!
#CongresoNacionalDeInmunologia
#Chihuahua2025
#CongresoNacionalDeInmunologia
#Chihuahua2025
November 14, 2025 at 10:44 PM
A month ago we presented our work at the XXVI National Congress of Immunology in Chihuahua, Mexico 🇲🇽, organized by @sminmunologia.bsky.social. It has been wonderful to share what we have learned about sialomucin CD43 🧬 in erythroid differentiation 🩸!
#CongresoNacionalDeInmunologia
#Chihuahua2025
#CongresoNacionalDeInmunologia
#Chihuahua2025
Reposted by Gabriel Ramírez-Vilchis
Our new work is now out in AJHG "Natural selection acting on complex traits hampers the predictive accuracy of polygenic scores in ancient samples." Great collaboration with @delvecchyo.bsky.social and Emilia Huerta-Sanchez, led by Valeria Añorve-Garibay.
📣Online now!
📄Natural selection acting on complex traits hampers the predictive accuracy of polygenic scores in ancient samples
🧑🤝🧑 @delvecchyo.bsky.social @mashaals.bsky.social & co
📄Natural selection acting on complex traits hampers the predictive accuracy of polygenic scores in ancient samples
🧑🤝🧑 @delvecchyo.bsky.social @mashaals.bsky.social & co
Natural selection acting on complex traits hampers the predictive accuracy of polygenic scores in ancient samples
Using polygenic scores, we find that two types of natural selection, stabilizing selection
and directional selection, can decrease the prediction accuracy of complex traits
in ancient individuals. We ...
www.cell.com
June 10, 2025 at 4:38 PM
Our new work is now out in AJHG "Natural selection acting on complex traits hampers the predictive accuracy of polygenic scores in ancient samples." Great collaboration with @delvecchyo.bsky.social and Emilia Huerta-Sanchez, led by Valeria Añorve-Garibay.
Reposted by Gabriel Ramírez-Vilchis
A visual–omics foundation model to bridge histopathology with spatial transcriptomics www.nature.com/articles/s4...
June 7, 2025 at 2:15 PM
A visual–omics foundation model to bridge histopathology with spatial transcriptomics www.nature.com/articles/s4...
Reposted by Gabriel Ramírez-Vilchis
📢 ¡Te queremos ver en el XXVI Congreso Nacional de Inmunología en Chihuahua!
⌛No olvides que la fecha límite para enviar tus resúmenes se acerca. Para más información visita el sitio del congreso.
#InmunoCongreso #Chihuahua2025 #CongresoNacionaldeInmunología #SMInmunologia
⌛No olvides que la fecha límite para enviar tus resúmenes se acerca. Para más información visita el sitio del congreso.
#InmunoCongreso #Chihuahua2025 #CongresoNacionaldeInmunología #SMInmunologia
June 4, 2025 at 1:32 PM
📢 ¡Te queremos ver en el XXVI Congreso Nacional de Inmunología en Chihuahua!
⌛No olvides que la fecha límite para enviar tus resúmenes se acerca. Para más información visita el sitio del congreso.
#InmunoCongreso #Chihuahua2025 #CongresoNacionaldeInmunología #SMInmunologia
⌛No olvides que la fecha límite para enviar tus resúmenes se acerca. Para más información visita el sitio del congreso.
#InmunoCongreso #Chihuahua2025 #CongresoNacionaldeInmunología #SMInmunologia
Reposted by Gabriel Ramírez-Vilchis
🚀 Interested in multimodal analysis with WNN in Seurat?
Check out my recent RStatClub presentation, where we dive into Jaccard, canonical gene expression, and Silhouette for clustering evaluation!
📺 Watch here: speakerdeck.com/cyntsc/clust...
📑 Slides: www.youtube.com/watch?v=mE77...
#RStats
Check out my recent RStatClub presentation, where we dive into Jaccard, canonical gene expression, and Silhouette for clustering evaluation!
📺 Watch here: speakerdeck.com/cyntsc/clust...
📑 Slides: www.youtube.com/watch?v=mE77...
#RStats
Clustering methods in multiome scRNA-seq and scATAC-seq
Main topics covered on this talk:
Introducing the Weighted-Nearest Neighbor (WNN) for multimodal analysis
A glance of WNN clustering algorithms availa…
speakerdeck.com
February 13, 2025 at 5:40 PM
🚀 Interested in multimodal analysis with WNN in Seurat?
Check out my recent RStatClub presentation, where we dive into Jaccard, canonical gene expression, and Silhouette for clustering evaluation!
📺 Watch here: speakerdeck.com/cyntsc/clust...
📑 Slides: www.youtube.com/watch?v=mE77...
#RStats
Check out my recent RStatClub presentation, where we dive into Jaccard, canonical gene expression, and Silhouette for clustering evaluation!
📺 Watch here: speakerdeck.com/cyntsc/clust...
📑 Slides: www.youtube.com/watch?v=mE77...
#RStats
Reposted by Gabriel Ramírez-Vilchis
Our paper providing transcriptomic profiles of lateral septum (LS) cell types in human 🧠 is now online: www.cell.com/iscience/ful...
All data and code are publicly available online (links in the paper) and we provide an interactive web-based app to explore the data: libd.shinyapps.io/LS_snRNAseq/
All data and code are publicly available online (links in the paper) and we provide an interactive web-based app to explore the data: libd.shinyapps.io/LS_snRNAseq/
Transcriptomic characterization of human lateral septum neurons reveals conserved and divergent marker genes across species
Neuroscience; Cellular neuroscience; Transcriptomics
www.cell.com
January 31, 2025 at 10:19 PM
Our paper providing transcriptomic profiles of lateral septum (LS) cell types in human 🧠 is now online: www.cell.com/iscience/ful...
All data and code are publicly available online (links in the paper) and we provide an interactive web-based app to explore the data: libd.shinyapps.io/LS_snRNAseq/
All data and code are publicly available online (links in the paper) and we provide an interactive web-based app to explore the data: libd.shinyapps.io/LS_snRNAseq/
Reposted by Gabriel Ramírez-Vilchis
Axolotls have been important in Mexican culture since Aztec’s time. They’re named after the god Xolotl (monsters, fire, lightning). This amazing species is critically endangered in the wild, as it’s habitat is disappearing in Mexico City. Today is national Axolotl day! 🧪🐸🌎🇲🇽
February 1, 2025 at 6:28 PM
Axolotls have been important in Mexican culture since Aztec’s time. They’re named after the god Xolotl (monsters, fire, lightning). This amazing species is critically endangered in the wild, as it’s habitat is disappearing in Mexico City. Today is national Axolotl day! 🧪🐸🌎🇲🇽
Reposted by Gabriel Ramírez-Vilchis
New in @naturecomms.bsky.social: I'm thrilled to share with you our latest work that applies #srRNAseq to understand splicing accuracy across human introns, tissues and in the context of ageing and neurodegeneration www.nature.com/articles/s41...
Splicing accuracy varies across human introns, tissues, age and disease - Nature Communications
Inaccuracies in RNA splicing may play a significant role in aging and disease. Here, the authors present a comprehensive characterization of splicing accuracy across over 14,000 human samples, offerin...
www.nature.com
January 27, 2025 at 9:53 PM
New in @naturecomms.bsky.social: I'm thrilled to share with you our latest work that applies #srRNAseq to understand splicing accuracy across human introns, tissues and in the context of ageing and neurodegeneration www.nature.com/articles/s41...
immunogenViewer package for R, developed by Katharina Waury, seems to be such a good way to analyze proteins in order to find targets for some antibodies!
You can find it in bioconductor.org/packages/rel...
You can find it in bioconductor.org/packages/rel...
January 30, 2025 at 4:05 AM
immunogenViewer package for R, developed by Katharina Waury, seems to be such a good way to analyze proteins in order to find targets for some antibodies!
You can find it in bioconductor.org/packages/rel...
You can find it in bioconductor.org/packages/rel...
Single-cell RNA sequencing is very important when studying gene expression. I found scDotPlot package developed by @laufer.bsky.social, and I think it could be a very useful tool to analyze and plot scRNA-seq data using R.
You can find more information in bioconductor.org/packages/rel...
You can find more information in bioconductor.org/packages/rel...
January 30, 2025 at 3:52 AM
Single-cell RNA sequencing is very important when studying gene expression. I found scDotPlot package developed by @laufer.bsky.social, and I think it could be a very useful tool to analyze and plot scRNA-seq data using R.
You can find more information in bioconductor.org/packages/rel...
You can find more information in bioconductor.org/packages/rel...