Alex Buerkle
@disequilibber.bsky.social
Bioinformatics at Illumina. Previously at Gencove and a professor at the University of Wyoming
Reposted by Alex Buerkle
Congratulations to @michellezavala.bsky.social on the publication of one of her PhD. This research builds on #NSF-funded #PopUpPoplar research using WGS and replicate common gardens to understand how climate and hybridization influence stomata evolution
nph.onlinelibrary.wiley.com/doi/10.1111/...
nph.onlinelibrary.wiley.com/doi/10.1111/...
Climate and hybridization shape stomatal trait evolution in Populus
Stomata play a critical role in regulating plant responses to climate. Where sister species differ in stomatal traits, interspecific gene flow can influence the evolutionary trajectory of trait vari...
nph.onlinelibrary.wiley.com
November 17, 2025 at 1:37 PM
Congratulations to @michellezavala.bsky.social on the publication of one of her PhD. This research builds on #NSF-funded #PopUpPoplar research using WGS and replicate common gardens to understand how climate and hybridization influence stomata evolution
nph.onlinelibrary.wiley.com/doi/10.1111/...
nph.onlinelibrary.wiley.com/doi/10.1111/...
Reposted by Alex Buerkle
Amazing to have a byline with @cbo.bsky.social - read our take on Watson’s ultimate legacy in the Boston Globe. Will be in Sunday’s print edition.
"What James Watson got wrong about DNA"
By the great Sohini Ramachandran (@sramach.bsky.social) and your boy for The Boston Globe (@bostonglobe.com).
www.bostonglobe.com/2025/11/14/o...
By the great Sohini Ramachandran (@sramach.bsky.social) and your boy for The Boston Globe (@bostonglobe.com).
www.bostonglobe.com/2025/11/14/o...
What James Watson got wrong about DNA - The Boston Globe
The science he helped pioneer consistently undermines his view that genes determine everything about us.
www.bostonglobe.com
November 14, 2025 at 5:48 PM
Amazing to have a byline with @cbo.bsky.social - read our take on Watson’s ultimate legacy in the Boston Globe. Will be in Sunday’s print edition.
Reposted by Alex Buerkle
"What James Watson got wrong about DNA"
By the great Sohini Ramachandran (@sramach.bsky.social) and your boy for The Boston Globe (@bostonglobe.com).
www.bostonglobe.com/2025/11/14/o...
By the great Sohini Ramachandran (@sramach.bsky.social) and your boy for The Boston Globe (@bostonglobe.com).
www.bostonglobe.com/2025/11/14/o...
What James Watson got wrong about DNA - The Boston Globe
The science he helped pioneer consistently undermines his view that genes determine everything about us.
www.bostonglobe.com
November 14, 2025 at 4:50 PM
"What James Watson got wrong about DNA"
By the great Sohini Ramachandran (@sramach.bsky.social) and your boy for The Boston Globe (@bostonglobe.com).
www.bostonglobe.com/2025/11/14/o...
By the great Sohini Ramachandran (@sramach.bsky.social) and your boy for The Boston Globe (@bostonglobe.com).
www.bostonglobe.com/2025/11/14/o...
Reposted by Alex Buerkle
Well, it's a little clearer now why billionaires are so invested in technology that produces better written emails.
November 12, 2025 at 10:23 PM
Well, it's a little clearer now why billionaires are so invested in technology that produces better written emails.
More plainly visible and dynamic than I have seen before
November 12, 2025 at 4:21 AM
More plainly visible and dynamic than I have seen before
Reposted by Alex Buerkle
IT GOT BETTER
📍Central MN
📍Central MN
November 12, 2025 at 3:05 AM
IT GOT BETTER
📍Central MN
📍Central MN
Reposted by Alex Buerkle
If you're interested in working with me on a master's or PhD with questions related to genomics, biodiversity, and climate change, I'd love to chat about the CAMBIUM fellowship! There's an informational webinar next week and applications are due December 1st.
Join us on Nov 18 at 2:30 PM MST to learn about CAMBIUM grad fellowships in biodiversity informatics & climate change @uarizona.bsky.social. For incoming Fall 2026 students interested in big data, ecology, evolution, climate adaptation & more. Register: events.trellis.arizona.edu/en/f44lNu67/... 🌵🧬🌐
November 10, 2025 at 6:56 PM
If you're interested in working with me on a master's or PhD with questions related to genomics, biodiversity, and climate change, I'd love to chat about the CAMBIUM fellowship! There's an informational webinar next week and applications are due December 1st.
Reposted by Alex Buerkle
Very interesting perspective! I often have the opposite thought: "Experimenting like a modeller"
Perhaps the two could co-exist for better workflows. Extensive exploration on simulated data should be the norm before running experiments to make sure the design is capable of the intended inference.
Perhaps the two could co-exist for better workflows. Extensive exploration on simulated data should be the norm before running experiments to make sure the design is capable of the intended inference.
"Validate With Simulated Truth: A first habit is to test whether an analytical pipeline can recover known conditions."
Very good advice below. So much COVID nonsense (e.g. 'immunological dark matter') basically came down to a non-identifiable model that hadn't been properly tested.
Very good advice below. So much COVID nonsense (e.g. 'immunological dark matter') basically came down to a non-identifiable model that hadn't been properly tested.
Modelling Like an Experimentalist
Dahlin et al. (2024) apply experimental thinking to a model of mosquito-borne disease transmissions.
onlinelibrary.wiley.com
November 10, 2025 at 4:02 PM
Very interesting perspective! I often have the opposite thought: "Experimenting like a modeller"
Perhaps the two could co-exist for better workflows. Extensive exploration on simulated data should be the norm before running experiments to make sure the design is capable of the intended inference.
Perhaps the two could co-exist for better workflows. Extensive exploration on simulated data should be the norm before running experiments to make sure the design is capable of the intended inference.
Reposted by Alex Buerkle
Reading that article led me to seek out other writing by Coviello. This is an excellent piece relevant to everyone in or who cares about American academia. www.nplusonemag.com/online-only/...
November 9, 2025 at 4:50 PM
Reading that article led me to seek out other writing by Coviello. This is an excellent piece relevant to everyone in or who cares about American academia. www.nplusonemag.com/online-only/...
Reposted by Alex Buerkle
Amy Angert and I are recruiting a #postdoc to participate in a collaborative NSF-funded study of demographic responses to climate across the geographic range of the scarlet monkeyflower. Please repost! jobs.ncsu.edu/postings/224...
November 7, 2025 at 3:10 PM
Amy Angert and I are recruiting a #postdoc to participate in a collaborative NSF-funded study of demographic responses to climate across the geographic range of the scarlet monkeyflower. Please repost! jobs.ncsu.edu/postings/224...
Reposted by Alex Buerkle
I am so proud & happy to see our Potamo genome assembly finally out there in the world! The process ended up being way more challenging than expected, but for some really cool reasons. ❤️🐌🧬
TLDR: Surprise! A VERY recent WGD.
academic.oup.com/gbe/article/...
Photo: C. Böck, ILIM, Mondsee, Austria)
TLDR: Surprise! A VERY recent WGD.
academic.oup.com/gbe/article/...
Photo: C. Böck, ILIM, Mondsee, Austria)
November 5, 2025 at 4:50 PM
I am so proud & happy to see our Potamo genome assembly finally out there in the world! The process ended up being way more challenging than expected, but for some really cool reasons. ❤️🐌🧬
TLDR: Surprise! A VERY recent WGD.
academic.oup.com/gbe/article/...
Photo: C. Böck, ILIM, Mondsee, Austria)
TLDR: Surprise! A VERY recent WGD.
academic.oup.com/gbe/article/...
Photo: C. Böck, ILIM, Mondsee, Austria)
Reposted by Alex Buerkle
Reposted by Alex Buerkle
We have TWO post-doctoral fellowships in the Biodiversity Centre at UBC next year! Am happy to chat if you might want to be hosted in my lab. biodiversity.ubc.ca/training-and... Deadline January 15th!
November 3, 2025 at 5:16 PM
We have TWO post-doctoral fellowships in the Biodiversity Centre at UBC next year! Am happy to chat if you might want to be hosted in my lab. biodiversity.ubc.ca/training-and... Deadline January 15th!
Reposted by Alex Buerkle
We are hiring! Postdoc position exploring the ecological niche of the Molassodon ecospecies of Vibrio parahaemolyticus, that we @campy-bara.bsky.social have previously shown has a distinct "hunt, kill, devour phenotype in the laboratory. details here: www.simm.cas.cn/web/rcdw/rcz... please share.
病原菌定量基因组学研究组（DANIEL FALUSH组）博士后招聘启事----中国科学院上海药物研究所
www.simm.cas.cn
October 31, 2025 at 4:40 AM
We are hiring! Postdoc position exploring the ecological niche of the Molassodon ecospecies of Vibrio parahaemolyticus, that we @campy-bara.bsky.social have previously shown has a distinct "hunt, kill, devour phenotype in the laboratory. details here: www.simm.cas.cn/web/rcdw/rcz... please share.
Reposted by Alex Buerkle
Impressive how this article cites a who-is-who among anti-science grifters. For anybody who needs a dose of reality, this video is excellent.
www.youtube.com/watch?v=miJb...
www.youtube.com/watch?v=miJb...
conspiracy physics and you (and also me)
YouTube video by Angela Collier
www.youtube.com
October 21, 2025 at 2:24 AM
Impressive how this article cites a who-is-who among anti-science grifters. For anybody who needs a dose of reality, this video is excellent.
www.youtube.com/watch?v=miJb...
www.youtube.com/watch?v=miJb...
Reposted by Alex Buerkle
Here is something you will only find in this part of the UP.
A person on FB selling a 515 lb piece of "float copper"
This means it is a piece of nearly pure copper deposited here during the last deglacial.
People search for these with metal detectors since anything at the surface has been found.
A person on FB selling a 515 lb piece of "float copper"
This means it is a piece of nearly pure copper deposited here during the last deglacial.
People search for these with metal detectors since anything at the surface has been found.
October 21, 2025 at 2:14 AM
Here is something you will only find in this part of the UP.
A person on FB selling a 515 lb piece of "float copper"
This means it is a piece of nearly pure copper deposited here during the last deglacial.
People search for these with metal detectors since anything at the surface has been found.
A person on FB selling a 515 lb piece of "float copper"
This means it is a piece of nearly pure copper deposited here during the last deglacial.
People search for these with metal detectors since anything at the surface has been found.
Reposted by Alex Buerkle
Administrators at Indiana University baselessly fired the student media director and ordered the student paper to cease its print edition, so it'd sure be a shame if this excellent digital front page were to be widely shared today
issuu.com/idsnews/docs...
issuu.com/idsnews/docs...
October 17, 2025 at 1:31 PM
Administrators at Indiana University baselessly fired the student media director and ordered the student paper to cease its print edition, so it'd sure be a shame if this excellent digital front page were to be widely shared today
issuu.com/idsnews/docs...
issuu.com/idsnews/docs...
Reposted by Alex Buerkle
Our paper is out! We found out that there are seasonal changes in shallow sediments which potentially upends any study that has interpreted them as a static environment. Including my own papers.
Influence of Seasonal Succession on Microbiological and Physiochemical Composition in Shallow Estuarine Sediments enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/... #jcampubs
Influence of Seasonal Succession on Microbiological and Physiochemical Composition in Shallow Estuarine Sediments
Marine sediments harbour diverse microbial populations, thought to be of low activity due to depleted electron acceptors and lack of new organic matter after burial. We show that deeper microbial pop...
enviromicro-journals.onlinelibrary.wiley.com
October 16, 2025 at 3:13 PM
Our paper is out! We found out that there are seasonal changes in shallow sediments which potentially upends any study that has interpreted them as a static environment. Including my own papers.
Reposted by Alex Buerkle
Reposted by Alex Buerkle
Hiker Wandering Through Oregon Forest Enjoying Vibrant Reds And Golds Of Fall https://theonion.com/hiker-wandering-through-oregon-forest-enjoying-vibrant-1845142293/
October 15, 2025 at 9:00 PM
Hiker Wandering Through Oregon Forest Enjoying Vibrant Reds And Golds Of Fall https://theonion.com/hiker-wandering-through-oregon-forest-enjoying-vibrant-1845142293/
Reposted by Alex Buerkle
Science on Tap is back! Looking forward to hearing Dr. Kim O'Keefe talk about fire ecology and climate change tonight!
Science on Tap resumes!
Save The Date: Science on Tap on Tuesday October 14th @ 7 pm at Blackrocks Brewery! Come to listen to the awesome research from Dr Kim O'Keefe on "Fuel for Thought: Fire Ecology in a Warming World". Sponsored by Biology & EEGs Departments
Save The Date: Science on Tap on Tuesday October 14th @ 7 pm at Blackrocks Brewery! Come to listen to the awesome research from Dr Kim O'Keefe on "Fuel for Thought: Fire Ecology in a Warming World". Sponsored by Biology & EEGs Departments
October 14, 2025 at 1:43 PM
Science on Tap is back! Looking forward to hearing Dr. Kim O'Keefe talk about fire ecology and climate change tonight!
Reposted by Alex Buerkle
Last week we were in the Washington Post for our characterization of Robertsonian chromosomes. This week we are entering our 10th day of being shut down and all of our research is on hold. To help me feel not-so-bad, here is a thread of some studies we released right before the shutdown 🧵 [1/n]...
October 10, 2025 at 3:24 PM
Last week we were in the Washington Post for our characterization of Robertsonian chromosomes. This week we are entering our 10th day of being shut down and all of our research is on hold. To help me feel not-so-bad, here is a thread of some studies we released right before the shutdown 🧵 [1/n]...
Reposted by Alex Buerkle
Woman Tends To Do Best Creative Thinking When Backed Into Corner With Livelihood At Stake https://theonion.com/woman-tends-to-do-best-creative-thinking-when-backed-in-1851338274/
October 9, 2025 at 2:01 PM
Woman Tends To Do Best Creative Thinking When Backed Into Corner With Livelihood At Stake https://theonion.com/woman-tends-to-do-best-creative-thinking-when-backed-in-1851338274/
Reposted by Alex Buerkle
Join the Laughlin lab and our new NSF funded project! Awesome opportunity to visit forests across the western US and examine the functional basis of demographic responses to drought and wildfire.
Great PhD opportunity with an excellent supervisor:
Quantify traits of tree species across the western US to determine how tree populations and forest communities will respond to drought and fire.
plant-traits.net/lab-openings/
Quantify traits of tree species across the western US to determine how tree populations and forest communities will respond to drought and fire.
plant-traits.net/lab-openings/
Lab openings | Laughlin Research Lab
plant-traits.net
October 8, 2025 at 11:05 PM
Join the Laughlin lab and our new NSF funded project! Awesome opportunity to visit forests across the western US and examine the functional basis of demographic responses to drought and wildfire.
Reposted by Alex Buerkle
I'm honored to receive a MacArthur Fellowship. As always, I extend my sincerest thanks to all my wonderful mentors, colleagues, collaborators, admins, and trainees who make this work possible. #MacFellow
UT Austin has a new “genius grant” recipient!
Texas Science professor Jason McLellan has been awarded a MacArthur Fellowship — aka the “genius grant” — by The MacArthur Foundation.
#TexasScience @mclellanlab.bsky.social #MacArthurGenius @utaustin.bsky.social
cns.utexas.edu/news/accolad...
Texas Science professor Jason McLellan has been awarded a MacArthur Fellowship — aka the “genius grant” — by The MacArthur Foundation.
#TexasScience @mclellanlab.bsky.social #MacArthurGenius @utaustin.bsky.social
cns.utexas.edu/news/accolad...
Virus Slayer Awarded ‘Genius Grant’ by MacArthur Foundation
The award recognizes Jason McLellan’s work to investigate how viruses infect our cells and to develop new treatments for infectious disease.
cns.utexas.edu
October 8, 2025 at 7:59 PM
I'm honored to receive a MacArthur Fellowship. As always, I extend my sincerest thanks to all my wonderful mentors, colleagues, collaborators, admins, and trainees who make this work possible. #MacFellow