URGI
@urgi-inrae.bsky.social
Unit Resources Genomics-Info (URGI) from @inrae-france.bsky.social.
URGI offers multiple services available at https://urgi.versailles.inrae.fr/
URGI offers multiple services available at https://urgi.versailles.inrae.fr/
Nous proposons un protocole de soumission de données aux archives EMBL-EBI. Vous pouvez visionner un webinaire à ce sujet ici www.youtube.com/watch?v=zezQ...
Webinaire 2025 Soumission aux archives EMBL-EBI
YouTube video by UR Genomics-Info
www.youtube.com
November 20, 2025 at 10:25 AM
Nous proposons un protocole de soumission de données aux archives EMBL-EBI. Vous pouvez visionner un webinaire à ce sujet ici www.youtube.com/watch?v=zezQ...
We have made two WheatIS videos available based on feedback from experiences with LLMs. You can access here www.youtube.com/watch?v=kEHc... and here www.youtube.com/watch?v=4imk...
WheatIS sharing experiences on LLM part1
YouTube video by UR Genomics-Info
www.youtube.com
November 18, 2025 at 5:32 PM
We have made two WheatIS videos available based on feedback from experiences with LLMs. You can access here www.youtube.com/watch?v=kEHc... and here www.youtube.com/watch?v=4imk...
Internship position open at INRAE-URGI for 2026, more details available here www.sfbi.fr/emplois/offr...
Optimisation de la classification automatique des éléments transposables par des approches d’IA | SFBI Société Française de Bioinformatique
Emploi en bioinformatique à None Stage Stage M2
www.sfbi.fr
October 29, 2025 at 9:37 AM
Internship position open at INRAE-URGI for 2026, more details available here www.sfbi.fr/emplois/offr...
We have made public the data from WP2 of the BreedWheat project. You can find this resources here wheat-urgi.versailles.inrae.fr/Projects/Bre... with the label WP2. You can find phenotyping data, genotyping data and association data.
BreedWheat - WHEAT URGI
Content Management System
wheat-urgi.versailles.inrae.fr
September 19, 2025 at 11:51 AM
We have made public the data from WP2 of the BreedWheat project. You can find this resources here wheat-urgi.versailles.inrae.fr/Projects/Bre... with the label WP2. You can find phenotyping data, genotyping data and association data.
Reposted by URGI
Vous êtes à #JOBIM2025 et vous avez manquez le poster de @marienewan.bsky.social sur la nouvelle version de #REPET ? Rassurez vous une demo est organisé aujourd'hui à midi en amphi E. Vous découvrirez toutes les évolutions mises en place pour vous faciliter l'annotation des #transposons
July 10, 2025 at 6:04 AM
Vous êtes à #JOBIM2025 et vous avez manquez le poster de @marienewan.bsky.social sur la nouvelle version de #REPET ? Rassurez vous une demo est organisé aujourd'hui à midi en amphi E. Vous découvrirez toutes les évolutions mises en place pour vous faciliter l'annotation des #transposons
ELIXIR has released a position paper on open biodata, more information here elixir-europe.org/news/positio... or here www.linkedin.com/posts/elixir...
ELIXIR position paper on securing open biodata resources for European competitiveness | ELIXIR
elixir-europe.org
June 24, 2025 at 1:15 PM
ELIXIR has released a position paper on open biodata, more information here elixir-europe.org/news/positio... or here www.linkedin.com/posts/elixir...
Check this interview wheatgenome.org/people/leade... on IWGSC website from our Deputy Director at URGI @michaelalaux.bsky.social. His thoughts on Wheat Genomics and bioinformatics on the last few years and for the future.
Michael Alaux
Michael Alaux is the Deputy Director of URGI (Unit Resources Genomics-Info) at the French National Research Institute for Agriculture, Food, and Environment (IN...
wheatgenome.org
April 11, 2025 at 9:54 AM
Check this interview wheatgenome.org/people/leade... on IWGSC website from our Deputy Director at URGI @michaelalaux.bsky.social. His thoughts on Wheat Genomics and bioinformatics on the last few years and for the future.
🚨📢 We are hiring a postdoc position at URGI in bioinformatics genomics. All details are available here urgi.versailles.inrae.fr/About-us/New...
Postdoc position - URGI
Content Management System
urgi.versailles.inrae.fr
February 21, 2025 at 12:52 PM
🚨📢 We are hiring a postdoc position at URGI in bioinformatics genomics. All details are available here urgi.versailles.inrae.fr/About-us/New...
Reposted by URGI
The great @johannconfais.bsky.social on a reference-free approach (panREPET) to annotate #Transposons in #pangenomes 🧬
January 14, 2025 at 7:24 PM
The great @johannconfais.bsky.social on a reference-free approach (panREPET) to annotate #Transposons in #pangenomes 🧬
Great presentation from @johannconfais.bsky.social at #PAG2025 #PAG32 on the first result obtained with panREPET tool a non reference centric approach
January 14, 2025 at 7:41 PM
Great presentation from @johannconfais.bsky.social at #PAG2025 #PAG32 on the first result obtained with panREPET tool a non reference centric approach
Reposted by URGI
REPET got a complete overhaul in version 4.0 ! Etienne Bardet from @urgi-inrae.bsky.social presents the updates in #PAG32
forgemia.inra.fr/urgi-anagen/...
forgemia.inra.fr/urgi-anagen/...
January 13, 2025 at 8:59 PM
REPET got a complete overhaul in version 4.0 ! Etienne Bardet from @urgi-inrae.bsky.social presents the updates in #PAG32
forgemia.inra.fr/urgi-anagen/...
forgemia.inra.fr/urgi-anagen/...
Reposted by URGI
Great tall from @clementgoubert.bsky.social to present GraffiTE: a pipline that finds polymorphic TE in genomes
#PAG32
github.com/cgroza/Graff...
#PAG32
github.com/cgroza/Graff...
January 13, 2025 at 2:14 AM
Great tall from @clementgoubert.bsky.social to present GraffiTE: a pipline that finds polymorphic TE in genomes
#PAG32
github.com/cgroza/Graff...
#PAG32
github.com/cgroza/Graff...
Maud Marty will be present at #PAG2025 to introduce forest tree data in FAIDARE, a plant data discovery portal. You want to discover the forest tree data generated by the french community, let her guide you through the ecosystem
January 13, 2025 at 12:58 AM
Maud Marty will be present at #PAG2025 to introduce forest tree data in FAIDARE, a plant data discovery portal. You want to discover the forest tree data generated by the french community, let her guide you through the ecosystem
Vanita Haurheeram will be present at #PAG2025 to introduce URGI service to FAIR research data management. Template, guidelines, repositories, data portals tool, come see her at
POSTER80
POSTER80
January 13, 2025 at 12:45 AM
Vanita Haurheeram will be present at #PAG2025 to introduce URGI service to FAIR research data management. Template, guidelines, repositories, data portals tool, come see her at
POSTER80
POSTER80
Reposted by URGI
After @tehub.bsky.social satellite workshop at #ICTE2024 and the creation of a working group on benchmark, what about the next step ? A manual curation workshop ? Share your thougth with the TEhub
January 12, 2025 at 11:34 PM
After @tehub.bsky.social satellite workshop at #ICTE2024 and the creation of a working group on benchmark, what about the next step ? A manual curation workshop ? Share your thougth with the TEhub
Reposted by URGI
@johannconfais.bsky.social and @clementgoubert.bsky.social are presenting @tehub.bsky.social at #PAG2025, an amazing resource and driven community for anyone interested in transposable element
January 12, 2025 at 11:28 PM
@johannconfais.bsky.social and @clementgoubert.bsky.social are presenting @tehub.bsky.social at #PAG2025, an amazing resource and driven community for anyone interested in transposable element
Reposted by URGI
#PAG32 I'd bet that every genome studied at PAG has a least 1 #Transposon, if not thousands! Find us on Sunday for an exciting session on #mobileDNA!
January 10, 2025 at 10:06 PM
#PAG32 I'd bet that every genome studied at PAG has a least 1 #Transposon, if not thousands! Find us on Sunday for an exciting session on #mobileDNA!
Reposted by URGI
Amazing talk of @nico971.bsky.social from @urgi-inrae.bsky.social on RepetDB #PAG32
urgi.versailles.inra.fr/repetdb/begi...
urgi.versailles.inra.fr/repetdb/begi...
January 11, 2025 at 9:45 PM
Amazing talk of @nico971.bsky.social from @urgi-inrae.bsky.social on RepetDB #PAG32
urgi.versailles.inra.fr/repetdb/begi...
urgi.versailles.inra.fr/repetdb/begi...
URGI will be present at PAG 2025. We will talked about pangenomics, annotation tools, Data exchange and findability using BrAPI, Data management services, Forest tree data management, check the details here urgi.versailles.inrae.fr/About-us/New...
PAG 32 - URGI
Content Management System
urgi.versailles.inrae.fr
January 6, 2025 at 1:52 PM
URGI will be present at PAG 2025. We will talked about pangenomics, annotation tools, Data exchange and findability using BrAPI, Data management services, Forest tree data management, check the details here urgi.versailles.inrae.fr/About-us/New...