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nico971.bsky.social
Nicolas Francillonne
@nico971.bsky.social
86 followers 17 following 8 posts
Data manager à INRAE_URGI
Posts Replies Media Videos
Reposted by Nicolas Francillonne
urgi-inrae.bsky.social
Nous proposons un protocole de soumission de données aux archives EMBL-EBI. Vous pouvez visionner un webinaire à ce sujet ici www.youtube.com/watch?v=zezQ...
Webinaire 2025 Soumission aux archives EMBL-EBI
YouTube video by UR Genomics-Info
www.youtube.com
November 20, 2025 at 10:25 AM
Reposted by Nicolas Francillonne
urgi-inrae.bsky.social
We have made two WheatIS videos available based on feedback from experiences with LLMs. You can access here www.youtube.com/watch?v=kEHc... and here www.youtube.com/watch?v=4imk...
WheatIS sharing experiences on LLM part1
YouTube video by UR Genomics-Info
www.youtube.com
November 18, 2025 at 5:32 PM
Reposted by Nicolas Francillonne
urgi-inrae.bsky.social
We have made public the data from WP2 of the BreedWheat project. You can find this resources here wheat-urgi.versailles.inrae.fr/Projects/Bre... with the label WP2. You can find phenotyping data, genotyping data and association data.
BreedWheat - WHEAT URGI
Content Management System
wheat-urgi.versailles.inrae.fr
September 19, 2025 at 11:51 AM
Reposted by Nicolas Francillonne
marienewan.bsky.social
Venez me voir au poster 2, pour découvrir l'URGI, une plateforme bio-informatique @urgi-inrae.bsky.social
@jobim2025.bsky.social
#JOBIM2025 #URGI #INRAE
July 10, 2025 at 9:40 AM
Reposted by Nicolas Francillonne
marienewan.bsky.social
Venez découvrir #REPET, un outil de détection, de classification et d'annotation d'éléments transposables en live avec Etienne Bardet en amphi E @jobim2025.bsky.social

@urgi-inrae.bsky.social

#JOBIM2025 #URGI #INRAE
July 10, 2025 at 10:11 AM
Reposted by Nicolas Francillonne
johannconfais.bsky.social
Vous êtes à #JOBIM2025 et vous avez manquez le poster de @marienewan.bsky.social sur la nouvelle version de #REPET ? Rassurez vous une demo est organisé aujourd'hui à midi en amphi E. Vous découvrirez toutes les évolutions mises en place pour vous faciliter l'annotation des #transposons
July 10, 2025 at 6:04 AM
Reposted by Nicolas Francillonne
urgi-inrae.bsky.social
ELIXIR has released a position paper on open biodata, more information here elixir-europe.org/news/positio... or here www.linkedin.com/posts/elixir...
ELIXIR position paper on securing open biodata resources for European competitiveness | ELIXIR
elixir-europe.org
June 24, 2025 at 1:15 PM
Reposted by Nicolas Francillonne
urgi-inrae.bsky.social
Check this interview wheatgenome.org/people/leade... on IWGSC website from our Deputy Director at URGI @michaelalaux.bsky.social. His thoughts on Wheat Genomics and bioinformatics on the last few years and for the future.
Michael Alaux
Michael Alaux is the Deputy Director of URGI (Unit Resources Genomics-Info) at the French National Research Institute for Agriculture, Food, and Environment (IN...
wheatgenome.org
April 11, 2025 at 9:54 AM
Reposted by Nicolas Francillonne
clementgoubert.bsky.social
The great @johannconfais.bsky.social on a reference-free approach (panREPET) to annotate #Transposons in #pangenomes 🧬
January 14, 2025 at 7:24 PM
Reposted by Nicolas Francillonne
urgi-inrae.bsky.social
Great presentation from @johannconfais.bsky.social at #PAG2025 #PAG32 on the first result obtained with panREPET tool a non reference centric approach
January 14, 2025 at 7:41 PM
Reposted by Nicolas Francillonne
johannconfais.bsky.social
REPET got a complete overhaul in version 4.0 ! Etienne Bardet from @urgi-inrae.bsky.social presents the updates in #PAG32
forgemia.inra.fr/urgi-anagen/...
January 13, 2025 at 8:59 PM
Reposted by Nicolas Francillonne
johannconfais.bsky.social
Great tall from @clementgoubert.bsky.social to present GraffiTE: a pipline that finds polymorphic TE in genomes
#PAG32
github.com/cgroza/Graff...
January 13, 2025 at 2:14 AM
Reposted by Nicolas Francillonne
urgi-inrae.bsky.social
Vanita Haurheeram will be present at #PAG2025 to introduce URGI service to FAIR research data management. Template, guidelines, repositories, data portals tool, come see her at
POSTER80
January 13, 2025 at 12:45 AM
Reposted by Nicolas Francillonne
urgi-inrae.bsky.social
Maud Marty will be present at #PAG2025 to introduce forest tree data in FAIDARE, a plant data discovery portal. You want to discover the forest tree data generated by the french community, let her guide you through the ecosystem
January 13, 2025 at 12:58 AM
nico971.bsky.social
@johannconfais.bsky.social and @clementgoubert.bsky.social are presenting @tehub.bsky.social at #PAG2025, an amazing resource and driven community for anyone interested in transposable element
January 12, 2025 at 11:28 PM
Reposted by Nicolas Francillonne
clementgoubert.bsky.social
#PAG32 I'd bet that every genome studied at PAG has a least 1 #Transposon, if not thousands! Find us on Sunday for an exciting session on #mobileDNA!
January 10, 2025 at 10:06 PM
Reposted by Nicolas Francillonne
urgi-inrae.bsky.social
Great presentation from Michael Alaux in #BrAPI session #PAG2025, how the french community use BrAPI to share data between several tools
January 12, 2025 at 12:24 AM
Reposted by Nicolas Francillonne
urgi-inrae.bsky.social
URGI will be present at PAG 2025. We will talked about pangenomics, annotation tools, Data exchange and findability using BrAPI, Data management services, Forest tree data management, check the details here urgi.versailles.inrae.fr/About-us/New...
PAG 32 - URGI
Content Management System
urgi.versailles.inrae.fr
January 6, 2025 at 1:52 PM
nico971.bsky.social
📣 #hiringalert #JobOpening Rejoignez-nous en tant qu'ingénieur en données agronomiques @INRAE_URGI
en CDD sur Versailles ou Toulouse. Info : jobs.inrae.fr/ot-22883 @INRAE_DPT_BAP
@INRAE_France

@INRAE_IDF
@INRAE_Tlse

@Bioinf0mics

@IFB_Bioinfo
@UnivParisSaclay
@SfbiFr
Ingénieur-e données agronomiques
L’URGI, unité INRAE de recherche en bioinformatique dédiée à la génomique et à la génétique des plantes, recherche un ingénieur en données agronomiques, en contrat CDD pour 12 mois renouvelable. La pe...
jobs.inrae.fr
September 30, 2024 at 2:31 PM
nico971.bsky.social
C'est le moment de faire le bilan de ces 2 jours et de tracer la feuille de route pour l année à venir #BReIF #AgroDiv AgroBRC_RARe INRAE_URGI #France2030 Florilege, OLGA, IFB_Bioinfo @inrae-france.bsky.social #INRAE_DPT_BAP #INRAE_DPT_GA #INRAE_TOULOUSE
July 11, 2024 at 12:34 PM
nico971.bsky.social
C est parti pour l AG #PEPR à Toulouse pour les projets #AgroDiv et #BReIF. Ce 10 et 11 juillet, nous allons partager et discuter des avancées des projets #France2030 AgroBRC_RARe Florilege, IFB_Bioinfo @inrae-france.bsky.social INRAE_DPT_BAP INRAE_DPT_GA
July 10, 2024 at 10:28 AM
nico971.bsky.social
Et c est reparti, 2e journée de l atelier pangénomique
@inrae-france.bsky.social
à Versailles du SaPI PanAnnot #CATI_GREP
#CATI_BARIC @johannconfais.bsky.social
On discute des outils de pangénomique et de leur impact sur nos thématiques de travail.
July 4, 2024 at 7:41 AM
Reposted by Nicolas Francillonne
johannconfais.bsky.social
We are happy to announce that the recording of the last
#TEhub
workshop on #benchmark at
#ICTE2024
is available on our YouTube channel! youtube.com/watch?v=3qY0... Please share widely! #Transposons #TEsky
Workshop: "developing benchmarks for TE research/bioinformatics" | ICTE24 | Saint-Malo, France
Complete video and audio recording (lightly edited for time) of the 2024 TE-Hub Workshop "TE Hub workshop: developing benchmarks for TE research/methods/tool...
youtube.com
May 10, 2024 at 9:16 AM
nico971.bsky.social
#ICTE2024 is starting #TEworldwide, INRAE-URGI is here with @johannconfais.bsky.social Somia Saidi, Héléna Vassilieff and Etienne Bardet, come see our posters and discuss
April 20, 2024 at 5:43 PM
Reposted by Nicolas Francillonne
johannconfais.bsky.social
📢 #hiringalert #JobOpening #Concours Rejoignez-nous en tant qu'ingénieur développeur de pipeline d'analyse et #DevOps @INRAE_URGI sur Versailles ou Toulouse. Plus d'info sur urgi.versailles.inrae.fr/About-us/News/… @inrae-france.bsky.social
February 23, 2024 at 9:24 PM