Swantje Lenz
@swlenz.bsky.social
PostDoc at MPI-CBG, von Appen and Toth-Petroczy groups
Reposted by Swantje Lenz
Out today in @nature.com: Together with the Honigmann, Shevchenko, Drobot and Hof labs, we present a general workflow for imaging the localization and transport of individual lipids in cells and mapping their metabolism.
www.nature.com/articles/s41...
www.nature.com/articles/s41...
August 21, 2025 at 5:19 AM
Out today in @nature.com: Together with the Honigmann, Shevchenko, Drobot and Hof labs, we present a general workflow for imaging the localization and transport of individual lipids in cells and mapping their metabolism.
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Happy to share the first paper of my postdoc and happy to have been part of the team!
Identifying functional motifs in disordered regions is challenging. We gave it a try. Check out SHARK-capture, an alignment-free method to detect SLiMs. Congrats Chi Fung Willis Chow @swlenz.bsky.social et al. @mpi-cbg.de @csbdresden.bsky.social @poldresden.bsky.social doi.org/10.1002/pro....
SHARK‐capture identifies functional motifs in intrinsically disordered protein regions
Increasing insights into how sequence motifs in intrinsically disordered regions (IDRs) provide functions underscore the need for systematic motif detection. Contrary to structured regions where moti...
doi.org
March 19, 2025 at 12:08 PM
Happy to share the first paper of my postdoc and happy to have been part of the team!
Reposted by Swantje Lenz
Are lipids actively sorted during clathrin mediated endocytosis like proteins? @mathilda95.bsky.social addresses this key open question together with our collaborators from the Honigmann and Modes labs using a new Lipid-STED workflow.
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
March 10, 2025 at 11:57 AM
Are lipids actively sorted during clathrin mediated endocytosis like proteins? @mathilda95.bsky.social addresses this key open question together with our collaborators from the Honigmann and Modes labs using a new Lipid-STED workflow.
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
Reposted by Swantje Lenz
🍃CD-CODE update v1.09 is here!🍃
👀Check out the new #biomolecular #condensates at cd-code.org
👀We're continuing to update #Protein - #condensate connections and resolve issues!
Join us to share your #condensate #expertise as a contributor: cd-code.org/signup
#Bioinformatics #DatabaseUpdate #IDR
👀Check out the new #biomolecular #condensates at cd-code.org
👀We're continuing to update #Protein - #condensate connections and resolve issues!
Join us to share your #condensate #expertise as a contributor: cd-code.org/signup
#Bioinformatics #DatabaseUpdate #IDR
a group of ducklings are running in a field .
ALT: a group of ducklings are running in a field .
media.tenor.com
March 7, 2025 at 12:47 PM
🍃CD-CODE update v1.09 is here!🍃
👀Check out the new #biomolecular #condensates at cd-code.org
👀We're continuing to update #Protein - #condensate connections and resolve issues!
Join us to share your #condensate #expertise as a contributor: cd-code.org/signup
#Bioinformatics #DatabaseUpdate #IDR
👀Check out the new #biomolecular #condensates at cd-code.org
👀We're continuing to update #Protein - #condensate connections and resolve issues!
Join us to share your #condensate #expertise as a contributor: cd-code.org/signup
#Bioinformatics #DatabaseUpdate #IDR
Reposted by Swantje Lenz
It’s incredibly hard to study lipids in biological membranes on the nanoscale. You need near-perfect information on both membrane ultrastructure and lipid density, which usually isn’t attainable. Lipid-CLEM brought to you by @mathilda95.bsky.social changes that.
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
January 31, 2025 at 10:28 AM
It’s incredibly hard to study lipids in biological membranes on the nanoscale. You need near-perfect information on both membrane ultrastructure and lipid density, which usually isn’t attainable. Lipid-CLEM brought to you by @mathilda95.bsky.social changes that.
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
Reposted by Swantje Lenz
Our PICNIC tool predicts condensate-proteins regardless of their structural disorder across organisms @naturecomms.bsky.social. Congratulations to @annaha-poetry-art.bsky.social for developing the algorithm and to Hari
@hymanlab.bsky.social for the experiments! www.nature.com/articles/s41...
@hymanlab.bsky.social for the experiments! www.nature.com/articles/s41...
PICNIC accurately predicts condensate-forming proteins regardless of their structural disorder across organisms - Nature Communications
Here the authors report PICNIC (Proteins Involved in CoNdensates In Cells), a machine learning algorithm that predicts approximately 40–60% of proteins form condensates in various organisms, showing n...
www.nature.com
December 12, 2024 at 8:27 PM
Our PICNIC tool predicts condensate-proteins regardless of their structural disorder across organisms @naturecomms.bsky.social. Congratulations to @annaha-poetry-art.bsky.social for developing the algorithm and to Hari
@hymanlab.bsky.social for the experiments! www.nature.com/articles/s41...
@hymanlab.bsky.social for the experiments! www.nature.com/articles/s41...