PathoGenOmics Lab
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pathogenomics.bsky.social
PathoGenOmics Lab
@pathogenomics.bsky.social
PathoGenOmics research group at I2SysBio. Having fun learning how pathogens evolve.
Come and join us in Valencia next January for the meeting of the Spanish Society of Evolutionary Biology. Deadline for abstracts October 22nd. sesbe2026.es/registration/
October 16, 2025 at 11:10 AM
Spanish Society Evolutionary Biology meeting January 2026 in the botanical Garden ‪@uv.es‬ in Spain. Registration 200-350€. Preliminary program with confirmed keynote speakers: sesbe2026.es/programme/. Abstract submission until September 15th. sesbe2026.es/abstract/. Come to Valencia and join us!
July 14, 2025 at 11:05 AM
‪@ahmig.es‬ presented the poster "Expanding the scope of evolution reporting and analysis: from intra patient dynamics to outbreaks" at MCEB 2025 in Granada thanks to the funding @bcbhubcsic.bsky.social and ‪@ageinves.bsky.social‬.
May 27, 2025 at 10:13 AM
🔬 Beca JAE Intro en Bioinformática
Desarrolla HaploScope, una pipeline híbrida (Illumina + Nanopore/PacBio) para reconstrucción de haplotipos bacterianos y virales en @i2sysbio.bsky.social
Código: JAEINT25_EX_1603
🗓️ Solicita hasta 2 mayo
🔗 rb.gy/c6c8p2
#Bioinformática #Nextflow #JAEIntro #CSIC #TFM
April 4, 2025 at 11:14 AM
HubBCB-01 @CSIC.es. Impacto del microbioma respiratorio humano en la introducción de un nuevo patógeno. IP Mireia Coscolla (I2SYSBIO, Valencia) Cinco meses, cinco mensualidades de 600€, 20 horas/semana. Nota media de grado al menos 7. Si grado terminado, matriculado master bioinformática o similar.
March 25, 2025 at 9:47 AM
🧬 Estudiamos la genética tras la compatibilidad patógeno-hospedador en tuberculosis (laboratorios BSL2/BSL3). Dale play al vídeo: ¡que lo contagioso sea la ciencia! #EndTB #DíaMundialTuberculosis, Desde @csic.es, @ptisg.bsky.social, @i2sysbio.bsky.social y @paururo.bsky.social
March 24, 2025 at 9:45 AM
🦠 ¿Amigos o enemigos? La infección por tuberculosis depende de la compatibilidad patógeno-hospedador. Si encajan bien, la bacteria prospera; si no, fracasa. ¡Cuestión de genética! #EndTB #DíaMundialTuberculosis
March 24, 2025 at 9:42 AM
🦠 Friends or foes? Tuberculosis infection depends on host-pathogen compatibility. If they're genetically compatible, bacteria thrive; if not, they fail. It’s all about matching genes! #EndTB #WorldTBDay
March 24, 2025 at 9:41 AM
🔬 On World TB Day, we show you how we study tuberculosis genomes safely in BSL2/BSL3 labs to understand and stop its spread. Hit play—spread science, not TB! #EndTB #WorldTBDay @i2sysbio.bsky.social & @paururo.bsky.social,
March 24, 2025 at 9:35 AM
Check out our tools for genomic analisis at github.com/PathoGenOmic...
• get_MNV: Reclassifies SNVs as MNVs and predicts amino acid changes.
• snpick: SNP extraction for large alignments.
• VIPERA: Workflow for SARS-CoV-2 evolution.
• mycolorsTB: R color palette for M. tuberculosis.
November 22, 2024 at 8:03 AM