OpenCravat.bsky.social
@opencravat.bsky.social
Developed at Johns Hopkins, a platform to annotate and prioritize variants and genes in cancer and germline sequencing projects!
https://opencravat.org
https://opencravat.org
Introducing our latest offering: the Calibrated Classification Package for clinical interpretation of variant effect predictor scores. This innovative package aids users in applying ACMG/AMP variant interpretation guidelines.#annotator #opencravat #bioinformatics #opensource #genomics 🧬 🧪 🖥️
August 22, 2025 at 8:51 PM
Introducing our latest offering: the Calibrated Classification Package for clinical interpretation of variant effect predictor scores. This innovative package aids users in applying ACMG/AMP variant interpretation guidelines.#annotator #opencravat #bioinformatics #opensource #genomics 🧬 🧪 🖥️
🧬 Curious about your genome?
Join our free webinar on OpenCRAVAT to explore and annotate your own data!
📅 July 10 – 1 PM EDT
🎙️ Baker & Karchin (JHU)
🔗 tinyurl.com/3ur6vv35
#Genomics #Bioinformatics #OpenScience
#annotator #opencravat #bioinformatics #opensource #webinar #genomes 🖥🧪
Join our free webinar on OpenCRAVAT to explore and annotate your own data!
📅 July 10 – 1 PM EDT
🎙️ Baker & Karchin (JHU)
🔗 tinyurl.com/3ur6vv35
#Genomics #Bioinformatics #OpenScience
#annotator #opencravat #bioinformatics #opensource #webinar #genomes 🖥🧪
June 16, 2025 at 1:31 PM
🧬 Curious about your genome?
Join our free webinar on OpenCRAVAT to explore and annotate your own data!
📅 July 10 – 1 PM EDT
🎙️ Baker & Karchin (JHU)
🔗 tinyurl.com/3ur6vv35
#Genomics #Bioinformatics #OpenScience
#annotator #opencravat #bioinformatics #opensource #webinar #genomes 🖥🧪
Join our free webinar on OpenCRAVAT to explore and annotate your own data!
📅 July 10 – 1 PM EDT
🎙️ Baker & Karchin (JHU)
🔗 tinyurl.com/3ur6vv35
#Genomics #Bioinformatics #OpenScience
#annotator #opencravat #bioinformatics #opensource #webinar #genomes 🖥🧪
Discover the power of OpenCRAVAT's cutting-edge annotation features that ensure seamless collaboration among users. Its intuitive design makes it easy for everyone to navigate, while enhancing productivity across the board.#annotator #opencravat #bioinformatics #opensource #genomics 🖥️ 🧬
June 6, 2025 at 11:17 PM
Discover the power of OpenCRAVAT's cutting-edge annotation features that ensure seamless collaboration among users. Its intuitive design makes it easy for everyone to navigate, while enhancing productivity across the board.#annotator #opencravat #bioinformatics #opensource #genomics 🖥️ 🧬
🧬 We Want Your Feedback! 🧬\
Do you use variant annotation software? We’re gathering insights from the genomics community to improve OpenCRAVAT and understand what features matter most to you.💡 Take this quick survey (it takes less than 2 minutes!): https://shorturl.at/iOvMt
Do you use variant annotation software? We’re gathering insights from the genomics community to improve OpenCRAVAT and understand what features matter most to you.💡 Take this quick survey (it takes less than 2 minutes!): https://shorturl.at/iOvMt
February 22, 2025 at 10:53 PM
🧬 We Want Your Feedback! 🧬\
Do you use variant annotation software? We’re gathering insights from the genomics community to improve OpenCRAVAT and understand what features matter most to you.💡 Take this quick survey (it takes less than 2 minutes!): https://shorturl.at/iOvMt
Do you use variant annotation software? We’re gathering insights from the genomics community to improve OpenCRAVAT and understand what features matter most to you.💡 Take this quick survey (it takes less than 2 minutes!): https://shorturl.at/iOvMt
Day 12: 🎉 A Genomic Variant Community
Our community is at the heart of everything we do. From researchers to clinicians, your feedback shapes OpenCRAVAT's future. Join us in celebrating our shared journey in variant annotation. 💬 Connect with us: https://buff.ly/3ZQ1MZT 🖥️ 🧬 #Community #Genomics
Our community is at the heart of everything we do. From researchers to clinicians, your feedback shapes OpenCRAVAT's future. Join us in celebrating our shared journey in variant annotation. 💬 Connect with us: https://buff.ly/3ZQ1MZT 🖥️ 🧬 #Community #Genomics
December 12, 2024 at 2:00 PM
Day 12: 🎉 A Genomic Variant Community
Our community is at the heart of everything we do. From researchers to clinicians, your feedback shapes OpenCRAVAT's future. Join us in celebrating our shared journey in variant annotation. 💬 Connect with us: https://buff.ly/3ZQ1MZT 🖥️ 🧬 #Community #Genomics
Our community is at the heart of everything we do. From researchers to clinicians, your feedback shapes OpenCRAVAT's future. Join us in celebrating our shared journey in variant annotation. 💬 Connect with us: https://buff.ly/3ZQ1MZT 🖥️ 🧬 #Community #Genomics
⚙️ Day 11: Widgets That Work for You! Customization is 🔑! OpenCRAVAT’s widgets allow you to visualize variant data in a way that makes sense for your workflow.
🌐 Explore widgets: https://buff.ly/3DbcEbK
What’s your favorite widget?
#12DaysOfOpenCRAVAT #GenomicTools #Visualization🖥️ 🧬
🌐 Explore widgets: https://buff.ly/3DbcEbK
What’s your favorite widget?
#12DaysOfOpenCRAVAT #GenomicTools #Visualization🖥️ 🧬
December 11, 2024 at 11:00 PM
⚙️ Day 11: Widgets That Work for You! Customization is 🔑! OpenCRAVAT’s widgets allow you to visualize variant data in a way that makes sense for your workflow.
🌐 Explore widgets: https://buff.ly/3DbcEbK
What’s your favorite widget?
#12DaysOfOpenCRAVAT #GenomicTools #Visualization🖥️ 🧬
🌐 Explore widgets: https://buff.ly/3DbcEbK
What’s your favorite widget?
#12DaysOfOpenCRAVAT #GenomicTools #Visualization🖥️ 🧬
🌐 On the 10th day of #OpenCRAVAT, my workflow gave to me…
✨ Powerful API Capabilities!
Integrate OpenCRAVAT into pipelines: submit jobs, check statuses, and fetch custom reports programmatically.
Explore the API docs: https://buff.ly/4g8lMfP
#12DaysofOpenCRAVAT #Genomics
✨ Powerful API Capabilities!
Integrate OpenCRAVAT into pipelines: submit jobs, check statuses, and fetch custom reports programmatically.
Explore the API docs: https://buff.ly/4g8lMfP
#12DaysofOpenCRAVAT #Genomics
December 10, 2024 at 12:19 PM
🌐 On the 10th day of #OpenCRAVAT, my workflow gave to me…
✨ Powerful API Capabilities!
Integrate OpenCRAVAT into pipelines: submit jobs, check statuses, and fetch custom reports programmatically.
Explore the API docs: https://buff.ly/4g8lMfP
#12DaysofOpenCRAVAT #Genomics
✨ Powerful API Capabilities!
Integrate OpenCRAVAT into pipelines: submit jobs, check statuses, and fetch custom reports programmatically.
Explore the API docs: https://buff.ly/4g8lMfP
#12DaysofOpenCRAVAT #Genomics
☁️ Day 9 of #OpenCRAVAT: Run on the Cloud!
No hardware limits, no delays—just efficient genomic analysis anywhere. Learn how to set up OpenCRAVAT on the cloud today.
🔗Cloud Usage: https://buff.ly/3BjGavq
#12DaysofOpenCRAVAT #CloudComputing 🖥️ 🧬 #Genomics #Variants
No hardware limits, no delays—just efficient genomic analysis anywhere. Learn how to set up OpenCRAVAT on the cloud today.
🔗Cloud Usage: https://buff.ly/3BjGavq
#12DaysofOpenCRAVAT #CloudComputing 🖥️ 🧬 #Genomics #Variants
December 10, 2024 at 12:12 PM
☁️ Day 9 of #OpenCRAVAT: Run on the Cloud!
No hardware limits, no delays—just efficient genomic analysis anywhere. Learn how to set up OpenCRAVAT on the cloud today.
🔗Cloud Usage: https://buff.ly/3BjGavq
#12DaysofOpenCRAVAT #CloudComputing 🖥️ 🧬 #Genomics #Variants
No hardware limits, no delays—just efficient genomic analysis anywhere. Learn how to set up OpenCRAVAT on the cloud today.
🔗Cloud Usage: https://buff.ly/3BjGavq
#12DaysofOpenCRAVAT #CloudComputing 🖥️ 🧬 #Genomics #Variants
🔎 Day 8: Eight Data Filtering Options! Refine your results with precision: filter by gene, variant type, pathogenicity score, or population frequency.🧵
#12DaysofOpenCRAVAT #VariantAnalysis 🧬 🖥️
#12DaysofOpenCRAVAT #VariantAnalysis 🧬 🖥️
December 9, 2024 at 4:13 AM
🔎 Day 8: Eight Data Filtering Options! Refine your results with precision: filter by gene, variant type, pathogenicity score, or population frequency.🧵
#12DaysofOpenCRAVAT #VariantAnalysis 🧬 🖥️
#12DaysofOpenCRAVAT #VariantAnalysis 🧬 🖥️
Day 7: Personalize your analysis with OpenCRAVAT! Access numerous annotation tools and refine your focus on certain genes or variants using filters. Automate tasks with Python scripts. Choose input formats.. Export results. Try it locally or in the cloud. #Genomics #VariantAnalysis
December 7, 2024 at 8:41 PM
Day 7: Personalize your analysis with OpenCRAVAT! Access numerous annotation tools and refine your focus on certain genes or variants using filters. Automate tasks with Python scripts. Choose input formats.. Export results. Try it locally or in the cloud. #Genomics #VariantAnalysis
🌟 On the 6th day of #OpenCRAVAT, my database gave to me…Six Gene-Level Insights!
Which insight is most valuable for your research? CHASMplus, REVEL, PolyPhen-2, @gnomad-project.bsky.social, ClinVar, or COSMIC?
Explore OpenCRAVAT at opencravat.org
#Genomics #VariantAnalysis #OpenCRAVAT 🧬 🖥️
Which insight is most valuable for your research? CHASMplus, REVEL, PolyPhen-2, @gnomad-project.bsky.social, ClinVar, or COSMIC?
Explore OpenCRAVAT at opencravat.org
#Genomics #VariantAnalysis #OpenCRAVAT 🧬 🖥️
December 7, 2024 at 3:45 AM
🌟 On the 6th day of #OpenCRAVAT, my database gave to me…Six Gene-Level Insights!
Which insight is most valuable for your research? CHASMplus, REVEL, PolyPhen-2, @gnomad-project.bsky.social, ClinVar, or COSMIC?
Explore OpenCRAVAT at opencravat.org
#Genomics #VariantAnalysis #OpenCRAVAT 🧬 🖥️
Which insight is most valuable for your research? CHASMplus, REVEL, PolyPhen-2, @gnomad-project.bsky.social, ClinVar, or COSMIC?
Explore OpenCRAVAT at opencravat.org
#Genomics #VariantAnalysis #OpenCRAVAT 🧬 🖥️
On the 5th day of #OpenCRAVAT, my platform gave to me…
✨ Five Tips for New Users!
New to OpenCRAVAT? Check out the links in this thread. Got questions? Comment below!
#12DaysofOpenCRAVAT #Genomics #OpenData #Variants #Annotation
✨ Five Tips for New Users!
New to OpenCRAVAT? Check out the links in this thread. Got questions? Comment below!
#12DaysofOpenCRAVAT #Genomics #OpenData #Variants #Annotation
December 5, 2024 at 11:26 PM
On the 5th day of #OpenCRAVAT, my platform gave to me…
✨ Five Tips for New Users!
New to OpenCRAVAT? Check out the links in this thread. Got questions? Comment below!
#12DaysofOpenCRAVAT #Genomics #OpenData #Variants #Annotation
✨ Five Tips for New Users!
New to OpenCRAVAT? Check out the links in this thread. Got questions? Comment below!
#12DaysofOpenCRAVAT #Genomics #OpenData #Variants #Annotation
❄️ On the 4th day of #OpenCRAVAT, my workflow gave to me…
Four Annotation Sources!
Discover how gnomAD4, dbSNP, ClinVar, and COSMIC make your variant analysis powerful. Which do you rely on most?
Link to full list of annotators: https://docs.opencravat.org/en/latest/#available-modules
Four Annotation Sources!
Discover how gnomAD4, dbSNP, ClinVar, and COSMIC make your variant analysis powerful. Which do you rely on most?
Link to full list of annotators: https://docs.opencravat.org/en/latest/#available-modules
December 4, 2024 at 11:38 PM
❄️ On the 4th day of #OpenCRAVAT, my workflow gave to me…
Four Annotation Sources!
Discover how gnomAD4, dbSNP, ClinVar, and COSMIC make your variant analysis powerful. Which do you rely on most?
Link to full list of annotators: https://docs.opencravat.org/en/latest/#available-modules
Four Annotation Sources!
Discover how gnomAD4, dbSNP, ClinVar, and COSMIC make your variant analysis powerful. Which do you rely on most?
Link to full list of annotators: https://docs.opencravat.org/en/latest/#available-modules
✨ On the 3rd day of #OpenCRAVAT, my tools gave to me…
🎄 Three Custom Report Options!
Choose from TXT, Excel, or Sqlite outputs to fit your workflow. Which report type is your favorite? Reply below!
🔗https://buff.ly/3VlpryC
🔗https://buff.ly/4iewYJj
#12DaysofOpenCRAVAT #Genomics #VariantAnalysis
🎄 Three Custom Report Options!
Choose from TXT, Excel, or Sqlite outputs to fit your workflow. Which report type is your favorite? Reply below!
🔗https://buff.ly/3VlpryC
🔗https://buff.ly/4iewYJj
#12DaysofOpenCRAVAT #Genomics #VariantAnalysis
December 3, 2024 at 1:00 PM
✨ On the 3rd day of #OpenCRAVAT, my tools gave to me…
🎄 Three Custom Report Options!
Choose from TXT, Excel, or Sqlite outputs to fit your workflow. Which report type is your favorite? Reply below!
🔗https://buff.ly/3VlpryC
🔗https://buff.ly/4iewYJj
#12DaysofOpenCRAVAT #Genomics #VariantAnalysis
🎄 Three Custom Report Options!
Choose from TXT, Excel, or Sqlite outputs to fit your workflow. Which report type is your favorite? Reply below!
🔗https://buff.ly/3VlpryC
🔗https://buff.ly/4iewYJj
#12DaysofOpenCRAVAT #Genomics #VariantAnalysis
🎁 On the 2nd day of #OpenCRAVAT, my software gave to me…
✨ Two New Example Inputs!
Test OpenCRAVAT with hgvs and dbsnp inputs. Perfect for trying the software before running your data!
🔗https://buff.ly/3BapIgP & https://buff.ly/49l5yNJ
#12DaysofOpenCRAVAT #VariantAnnotation
✨ Two New Example Inputs!
Test OpenCRAVAT with hgvs and dbsnp inputs. Perfect for trying the software before running your data!
🔗https://buff.ly/3BapIgP & https://buff.ly/49l5yNJ
#12DaysofOpenCRAVAT #VariantAnnotation
December 2, 2024 at 11:30 PM
🎁 On the 2nd day of #OpenCRAVAT, my software gave to me…
✨ Two New Example Inputs!
Test OpenCRAVAT with hgvs and dbsnp inputs. Perfect for trying the software before running your data!
🔗https://buff.ly/3BapIgP & https://buff.ly/49l5yNJ
#12DaysofOpenCRAVAT #VariantAnnotation
✨ Two New Example Inputs!
Test OpenCRAVAT with hgvs and dbsnp inputs. Perfect for trying the software before running your data!
🔗https://buff.ly/3BapIgP & https://buff.ly/49l5yNJ
#12DaysofOpenCRAVAT #VariantAnnotation
🎄 On the 1st day of #OpenCRAVAT, my analysis gave to me…
✨ A Single Variant Tool for Free!
Quickly annotate any genomic variant right from the new OpenCRAVAT website. Try it now and simplify your workflows!
www.opencravat.org run.opencravat.org/webapps/vari...
✨ A Single Variant Tool for Free!
Quickly annotate any genomic variant right from the new OpenCRAVAT website. Try it now and simplify your workflows!
www.opencravat.org run.opencravat.org/webapps/vari...
December 1, 2024 at 8:14 PM
🎄 On the 1st day of #OpenCRAVAT, my analysis gave to me…
✨ A Single Variant Tool for Free!
Quickly annotate any genomic variant right from the new OpenCRAVAT website. Try it now and simplify your workflows!
www.opencravat.org run.opencravat.org/webapps/vari...
✨ A Single Variant Tool for Free!
Quickly annotate any genomic variant right from the new OpenCRAVAT website. Try it now and simplify your workflows!
www.opencravat.org run.opencravat.org/webapps/vari...
Starting December 1st, we’re launching the 12 Days of OpenCRAVAT—an adventurer’s guide to mastering genomic variant analysis. Each day, discover powerful tools, tips, and features designed to make your research faster, easier, and more insightful.
#12DaysofOpenCRAVAT #Genomics #VariantAnnotation
#12DaysofOpenCRAVAT #Genomics #VariantAnnotation
November 30, 2024 at 8:15 PM
Starting December 1st, we’re launching the 12 Days of OpenCRAVAT—an adventurer’s guide to mastering genomic variant analysis. Each day, discover powerful tools, tips, and features designed to make your research faster, easier, and more insightful.
#12DaysofOpenCRAVAT #Genomics #VariantAnnotation
#12DaysofOpenCRAVAT #Genomics #VariantAnnotation
Are you ready for our webinar with @blkwomencompbio ?? Register and get the pre-webinar details on our github discussion board! github.com/KarchinLab/o...
June 24, 2024 at 8:50 PM
Are you ready for our webinar with @blkwomencompbio ?? Register and get the pre-webinar details on our github discussion board! github.com/KarchinLab/o...
High-Throughput Annotation: OpenCRAVAT version 2.6.0 released!
Tell us what you think about the new release! Visit our discussion board.
github.com/KarchinLab/o...
Tell us what you think about the new release! Visit our discussion board.
github.com/KarchinLab/o...
April 24, 2024 at 8:49 PM
High-Throughput Annotation: OpenCRAVAT version 2.6.0 released!
Tell us what you think about the new release! Visit our discussion board.
github.com/KarchinLab/o...
Tell us what you think about the new release! Visit our discussion board.
github.com/KarchinLab/o...