Johannes Köster
johanneskoester.bsky.social
Johannes Köster
@johanneskoester.bsky.social
Professor for Bioinformatics and Computational Oncology
University of Duisburg-Essen
Author of Snakemake, founder of Bioconda
Reposted by Johannes Köster
Check out our demo hosted on GitHub pages: alignoth.github.io/alignoth-exa...
Props to my colleague Felix who worked with me on this over the last few weeks in the @johanneskoester.bsky.social lab.
alignoth.github.io
November 13, 2025 at 10:30 AM
This is really a worrying trend. Not even that extreme, but I am also worried about people using AI as writing assistant. I think the process of having to find concise and sane words describing the work is an important step, sometimes even leading to new insights or rethinking your own work.
October 20, 2025 at 3:53 PM
I have indeed plans to rewrite performance critical inner parts of snakemake in rust. Might be also something for the hackathon.
October 19, 2025 at 10:00 PM
Cool, thanks!
October 17, 2025 at 6:22 PM