Jessica Nordlund
@jessie-no.bsky.social
Genomics Core Facility Director and Associate Professor at Uppsala University & SciLifeLab Sweden
Technology nerd, leukemia genomics, runner
Technology nerd, leukemia genomics, runner
@scilifelab-ngi.bsky.social in collaboration with #Illumina are hosting a series of seminars on the topic of multiomics.
Come and join us in Stockholm (Sept 22) or Uppsala (Sept 23). More information and links to sign-up: tinyurl.com/yc7xjce5
Come and join us in Stockholm (Sept 22) or Uppsala (Sept 23). More information and links to sign-up: tinyurl.com/yc7xjce5
#multiomics #illumina #scilifelab #ngi #genomics #ngs #spatialtranscriptomics #singlecell #proteomics #epigenomics #biotech #lifescience #research #stockholm #uppsala | SciLifeLab National Genomics In...
🧬 𝗜𝗹𝗹𝘂𝗺𝗶𝗻𝗮 𝗠𝘂𝗹𝘁𝗶𝗼𝗺𝗶𝗰𝘀 𝗗𝗮𝘆: 𝗖𝗵𝗼𝗼𝘀𝗲 𝗬𝗼𝘂𝗿 𝗖𝗶𝘁𝘆! 🧬
The future of integrated biology is here! Illumina and SciLifeLab National Genomics Infrastructure - NGI are hosting two Multiomics Day events in Septem...
tinyurl.com
August 29, 2025 at 10:40 AM
@scilifelab-ngi.bsky.social in collaboration with #Illumina are hosting a series of seminars on the topic of multiomics.
Come and join us in Stockholm (Sept 22) or Uppsala (Sept 23). More information and links to sign-up: tinyurl.com/yc7xjce5
Come and join us in Stockholm (Sept 22) or Uppsala (Sept 23). More information and links to sign-up: tinyurl.com/yc7xjce5
Come and work with us! Great team and exciting tech!
A postdoc position in genomics available at our infrastructure in Uppsala, Sweden! An interesting R&D role a bit outside the traditional academic environment, great colleagues, work at the forefront of (long-read) sequencing.
www.uu.se/en/about-uu/...
www.uu.se/en/about-uu/...
Postdoctoral position - Uppsala University
Postdoctoral position, Department of Immunology, Genetics and Pathology, Uppsala University
www.uu.se
August 20, 2025 at 6:19 AM
Come and work with us! Great team and exciting tech!
Reposted by Jessica Nordlund
I am starting a computational lab at LIOS, Riga, Latvia, and going to recruit a few people. Please DM if you are interested in a postdoc or PhD position in my Metabolic Research Group within the TARGETWISE project. I can highly recommend Riga, it is a beautiful city with very good living conditions.
July 18, 2025 at 9:03 AM
I am starting a computational lab at LIOS, Riga, Latvia, and going to recruit a few people. Please DM if you are interested in a postdoc or PhD position in my Metabolic Research Group within the TARGETWISE project. I can highly recommend Riga, it is a beautiful city with very good living conditions.
Happy to share a paper from our lab out in @hemasphere-journal.bsky.social
-Resistance to antimetabolites, glucocorticoids & doxorubicin = poorer relapse-free survival
-Molecular profiling reveals pre-treatment resistance signatures
Huge thanks to all the co-authors and funders for their support
-Resistance to antimetabolites, glucocorticoids & doxorubicin = poorer relapse-free survival
-Molecular profiling reveals pre-treatment resistance signatures
Huge thanks to all the co-authors and funders for their support
doi.org
August 4, 2025 at 5:25 AM
Happy to share a paper from our lab out in @hemasphere-journal.bsky.social
-Resistance to antimetabolites, glucocorticoids & doxorubicin = poorer relapse-free survival
-Molecular profiling reveals pre-treatment resistance signatures
Huge thanks to all the co-authors and funders for their support
-Resistance to antimetabolites, glucocorticoids & doxorubicin = poorer relapse-free survival
-Molecular profiling reveals pre-treatment resistance signatures
Huge thanks to all the co-authors and funders for their support
Check out the latest paper from our lab- here we tackled a problem that has been bothering me for over a decade, since we published our first gene-expression and DNA methylation ML-based subtype classifiers for pediatric ALL …
Our paper on conformal prediction for leukemia classification is now published. Our goal: provide statistical guarantees for machine learning, improving reliability and interpretability.
Read it here: doi.org/10.1200/CCI-...
#ConformalPrediction #Leukemia #MachineLearning #AIinMedicine
Read it here: doi.org/10.1200/CCI-...
#ConformalPrediction #Leukemia #MachineLearning #AIinMedicine
Error Reduction in Leukemia Machine Learning Classification With Conformal Prediction | JCO Clinical Cancer Informatics
PURPOSERecent advances in machine learning have led to the development of classifiers that
predict molecular subtypes of acute lymphoblastic leukemia (ALL) using RNA-sequencing
(RNA-seq) data. Althoug...
doi.org
May 29, 2025 at 6:58 AM
Check out the latest paper from our lab- here we tackled a problem that has been bothering me for over a decade, since we published our first gene-expression and DNA methylation ML-based subtype classifiers for pediatric ALL …
Registration is open for #Illumina "Epigenetics: the full picture” – free virtual event dedicated entirely to epigenetics on May 21-22. I had the honor to discuss opportunities and challenges from the Core facility perspective with the amazing @nadiasedl.bsky.social. Follow the link to register 🧬
May 16, 2025 at 6:37 AM
Registration is open for #Illumina "Epigenetics: the full picture” – free virtual event dedicated entirely to epigenetics on May 21-22. I had the honor to discuss opportunities and challenges from the Core facility perspective with the amazing @nadiasedl.bsky.social. Follow the link to register 🧬
There is still time to apply for this great postdoc opportunity
We’re hiring! Join us at the @scilifelab-ngi.bsky.social in Uppsala, Sweden
We're looking for a postdoc with a passion for -omics technology development to join our R&D team. This is a unique opportunity to work at the forefront of genomics and contribute to advancing cutting-edge sequencing tech!
We're looking for a postdoc with a passion for -omics technology development to join our R&D team. This is a unique opportunity to work at the forefront of genomics and contribute to advancing cutting-edge sequencing tech!
Postdoctoral Researcher, NGI Uppsala, SNP&SEQ Technology Platform - Uppsala University
Postdoctoral Researcher, NGI Uppsala, SNP&SEQ Technology Platform, Department of Medical Sciences, Uppsala University
www.uu.se
May 13, 2025 at 3:37 PM
There is still time to apply for this great postdoc opportunity
Reposted by Jessica Nordlund
We’re hiring! Join us at the @scilifelab-ngi.bsky.social in Uppsala, Sweden
We're looking for a postdoc with a passion for -omics technology development to join our R&D team. This is a unique opportunity to work at the forefront of genomics and contribute to advancing cutting-edge sequencing tech!
We're looking for a postdoc with a passion for -omics technology development to join our R&D team. This is a unique opportunity to work at the forefront of genomics and contribute to advancing cutting-edge sequencing tech!
Postdoctoral Researcher, NGI Uppsala, SNP&SEQ Technology Platform - Uppsala University
Postdoctoral Researcher, NGI Uppsala, SNP&SEQ Technology Platform, Department of Medical Sciences, Uppsala University
www.uu.se
April 25, 2025 at 3:30 PM
We’re hiring! Join us at the @scilifelab-ngi.bsky.social in Uppsala, Sweden
We're looking for a postdoc with a passion for -omics technology development to join our R&D team. This is a unique opportunity to work at the forefront of genomics and contribute to advancing cutting-edge sequencing tech!
We're looking for a postdoc with a passion for -omics technology development to join our R&D team. This is a unique opportunity to work at the forefront of genomics and contribute to advancing cutting-edge sequencing tech!
We’re hiring! Join us at the @scilifelab-ngi.bsky.social in Uppsala, Sweden
We're looking for a postdoc with a passion for -omics technology development to join our R&D team. This is a unique opportunity to work at the forefront of genomics and contribute to advancing cutting-edge sequencing tech!
We're looking for a postdoc with a passion for -omics technology development to join our R&D team. This is a unique opportunity to work at the forefront of genomics and contribute to advancing cutting-edge sequencing tech!
Postdoctoral Researcher, NGI Uppsala, SNP&SEQ Technology Platform - Uppsala University
Postdoctoral Researcher, NGI Uppsala, SNP&SEQ Technology Platform, Department of Medical Sciences, Uppsala University
www.uu.se
April 25, 2025 at 3:30 PM
We’re hiring! Join us at the @scilifelab-ngi.bsky.social in Uppsala, Sweden
We're looking for a postdoc with a passion for -omics technology development to join our R&D team. This is a unique opportunity to work at the forefront of genomics and contribute to advancing cutting-edge sequencing tech!
We're looking for a postdoc with a passion for -omics technology development to join our R&D team. This is a unique opportunity to work at the forefront of genomics and contribute to advancing cutting-edge sequencing tech!
Reposted by Jessica Nordlund
FOMO on all the cool science & tech at #AGBT25. on Feb 28th, we’re spilling all the beans on our fave developments in #ngs #spatial #multiomics #singlecell. Register: www.genengnews.com/multimedia/g... @jlemieux.bsky.social @biomath.bsky.social @catharineaquino.bsky.social @jessie-no.bsky.social
Managing Multiple Biomarker Therapeutic Development
On this episode of GEN Live, we’ll give you a full AGBT breakdown. Experts from the NGS, single cell, and spatial fields join the show to review and dissect this year’s announcements. We’ll cover the ...
www.genengnews.com
February 22, 2025 at 4:40 AM
FOMO on all the cool science & tech at #AGBT25. on Feb 28th, we’re spilling all the beans on our fave developments in #ngs #spatial #multiomics #singlecell. Register: www.genengnews.com/multimedia/g... @jlemieux.bsky.social @biomath.bsky.social @catharineaquino.bsky.social @jessie-no.bsky.social
Reposted by Jessica Nordlund
Hi everyone on Bluesky working in #genomics #NGS. Today is Valentines day. How many of you are more excited about Feb 20th?!
Read my new post on Enseqlopedia Roche emerges from the Lazarus pit to take on Illumina
enseqlopedia.com/2025/02/roch...
Read my new post on Enseqlopedia Roche emerges from the Lazarus pit to take on Illumina
enseqlopedia.com/2025/02/roch...
Roche emerges from the Lazarus pit
Is Roche going to "knock it out of the park" or "jump the shark"? Everyone I know is excited, even if many of them are sceptical, about the Feb 20th webinar and what we will learn about SBX. Alex Dick...
enseqlopedia.com
February 14, 2025 at 10:46 AM
Hi everyone on Bluesky working in #genomics #NGS. Today is Valentines day. How many of you are more excited about Feb 20th?!
Read my new post on Enseqlopedia Roche emerges from the Lazarus pit to take on Illumina
enseqlopedia.com/2025/02/roch...
Read my new post on Enseqlopedia Roche emerges from the Lazarus pit to take on Illumina
enseqlopedia.com/2025/02/roch...
Loads of single cells!!!! @scilifelab-ngi.bsky.social
Today Henrik & Abrahan from our single-cell team hosted @parse.bsky.social in our newly launched NGI OpenLab. If you're interested in finding out more about the OpenLab or #singlecell applications available at NGI please, check the link 🧬🧪
February 12, 2025 at 3:45 PM
Loads of single cells!!!! @scilifelab-ngi.bsky.social
Congrats to @dbergerbiol.bsky.social and team for this important study... and FYI your RNA was beautiful 🤩
“RNA quality is a significant challenge, especially when working with insect samples … To overcome this, careful sample collection and handling procedures are essential” says @jessie-no.bsky.social at @scilifelab-ngi.bsky.social 🧪🌍
More about the technique here ↓
www.scilifelab.se/news/pest-mo...
More about the technique here ↓
www.scilifelab.se/news/pest-mo...
Agricultural loss from pests is underestimated – models are missing evolutionary processes
Pest adapted to increasing temperatures that focus on surviving rather than reproducing, is more successful in both – creating a double blow for the crops they eat.
www.scilifelab.se
January 29, 2025 at 3:08 PM
Congrats to @dbergerbiol.bsky.social and team for this important study... and FYI your RNA was beautiful 🤩
Check out @mindymandy.bsky.social 's latest publication- testing the utility of Honeycomb Biotechnologies HIVE for single cell analysis of 🐎 samples from the equine clinic. 🧬🧪
Exploring a pico-well based scRNA-seq method (HIVE) for simplified processing of equine bronchoalveolar lavage cells
Single-cell RNA sequencing (scRNA-seq) is a valuable tool for investigating cellular heterogeneity in diseases such as equine asthma (EA). This study evaluates the HIVE™ scRNA-seq method, a pico-well-...
journals.plos.org
January 28, 2025 at 8:23 AM
Check out @mindymandy.bsky.social 's latest publication- testing the utility of Honeycomb Biotechnologies HIVE for single cell analysis of 🐎 samples from the equine clinic. 🧬🧪
On January 16th @scilifelab-ngi.bsky.social officially launched the NGI OpenLab, an innovative space designed to empower genomics researchers.
Now part of the SciLifeLab ecosystem in Uppsala, OpenLab bridges the gap between our genomics core services and the unique needs of the research community.
Now part of the SciLifeLab ecosystem in Uppsala, OpenLab bridges the gap between our genomics core services and the unique needs of the research community.
January 20, 2025 at 1:43 PM
On January 16th @scilifelab-ngi.bsky.social officially launched the NGI OpenLab, an innovative space designed to empower genomics researchers.
Now part of the SciLifeLab ecosystem in Uppsala, OpenLab bridges the gap between our genomics core services and the unique needs of the research community.
Now part of the SciLifeLab ecosystem in Uppsala, OpenLab bridges the gap between our genomics core services and the unique needs of the research community.
Reposted by Jessica Nordlund
Bit of a standard moan - “epigenetic association studies” are *very* hypothesis / model different vs GWAS (genotype association studies) even though the process v similar (put DNA on arrays, call alleles/epi-alleles, do association with covariates). *completely* different
January 15, 2025 at 7:59 AM
Bit of a standard moan - “epigenetic association studies” are *very* hypothesis / model different vs GWAS (genotype association studies) even though the process v similar (put DNA on arrays, call alleles/epi-alleles, do association with covariates). *completely* different
Only 2 days left to apply for this postdoc position in my group at Uppsala University in Sweden. 🩸🧪🧬
January 8, 2025 at 8:00 PM
Only 2 days left to apply for this postdoc position in my group at Uppsala University in Sweden. 🩸🧪🧬
Reposted by Jessica Nordlund
Don´t miss our call for project proposals for #AVITI24 Teton, a new line of #spatial #multi-omics assays capable of providing simultaneous detection of RNA and protein at a subcellular resolution tinyurl.com/3a9wxs5f
Open to projects affiliated with Swedish academic institutions.
Open to projects affiliated with Swedish academic institutions.
NGI Sweden » Project proposals for spatial multiomics analysis on AVITI24
Next Generation Sequencing and Genotyping for Swedish Research
tinyurl.com
November 29, 2024 at 1:59 PM
Don´t miss our call for project proposals for #AVITI24 Teton, a new line of #spatial #multi-omics assays capable of providing simultaneous detection of RNA and protein at a subcellular resolution tinyurl.com/3a9wxs5f
Open to projects affiliated with Swedish academic institutions.
Open to projects affiliated with Swedish academic institutions.
Reposted by Jessica Nordlund
Apply to work as a bioinformatician in our team in Stockholm.
Deadline: December 9
www.scilifelab.se/career/bioin...
Deadline: December 9
www.scilifelab.se/career/bioin...
Bioinformatician
Bioinformatician Are you interested in working with cutting-edge technologies and want to contribute to support the Swedish research community? We are seeking a skilled Bioinformatician to join our pr...
www.scilifelab.se
December 4, 2024 at 10:26 AM
Apply to work as a bioinformatician in our team in Stockholm.
Deadline: December 9
www.scilifelab.se/career/bioin...
Deadline: December 9
www.scilifelab.se/career/bioin...
Highly recommended!!! This was one of the best courses I took as a PhD student! (Don’t ask which year 😉)
🌟 Exciting news: The Leena Peltonen School of Human Genetics returns in 2025!
We're excited to bring PhD students together with an all-star list of leaders in human genetics.
📅 July 27-31, 2025
📍 Wellcome Genome Campus, UK
📝 Apply by March 7 at www.lpshg.com
We're excited to bring PhD students together with an all-star list of leaders in human genetics.
📅 July 27-31, 2025
📍 Wellcome Genome Campus, UK
📝 Apply by March 7 at www.lpshg.com
December 18, 2024 at 1:29 PM
Highly recommended!!! This was one of the best courses I took as a PhD student! (Don’t ask which year 😉)
How to tackle uncertainty in pediatric ALL subtype classification? Our group combines RNA-seq data with machine learning to classify molecular ALL subtypes --- But uncertainty in predictions has always been a challenge... until now 🩸 1/4
biorxiv.org
December 18, 2024 at 10:33 AM
How to tackle uncertainty in pediatric ALL subtype classification? Our group combines RNA-seq data with machine learning to classify molecular ALL subtypes --- But uncertainty in predictions has always been a challenge... until now 🩸 1/4
Prof. Emeritus Ann-Christine Syvänen shares her personal perspective on four decades of advancements in genomics technology. A must-read for those interested in evolution of the field 🧬🧬🧪
From early methods for DNA diagnostics to genomes and epigenomes at high resolution during four decades – a personal perspective
| Upsala Journal of Medical Sciences
doi.org
December 16, 2024 at 8:37 AM
Prof. Emeritus Ann-Christine Syvänen shares her personal perspective on four decades of advancements in genomics technology. A must-read for those interested in evolution of the field 🧬🧬🧪
Reposted by Jessica Nordlund
Hey Bluesky! Given that we are new here, we thought an introduction might be in place.
So, what is SciLifeLab? In short, we are a nonprofit research infrastructure based in Sweden, enabling life science research that would otherwise not be possible. 🧪🌍🖥️🧬
So, what is SciLifeLab? In short, we are a nonprofit research infrastructure based in Sweden, enabling life science research that would otherwise not be possible. 🧪🌍🖥️🧬
November 18, 2024 at 3:05 PM
Hey Bluesky! Given that we are new here, we thought an introduction might be in place.
So, what is SciLifeLab? In short, we are a nonprofit research infrastructure based in Sweden, enabling life science research that would otherwise not be possible. 🧪🌍🖥️🧬
So, what is SciLifeLab? In short, we are a nonprofit research infrastructure based in Sweden, enabling life science research that would otherwise not be possible. 🧪🌍🖥️🧬
Reposted by Jessica Nordlund
Biology of Genomes 2025 is coming up:
- meeting dates: May 6 - 10, 2025
- abstract deadline: Feb 14, 2025
We hope to see you there for another great meeting with a fantastic speaker lineup!
meetings.cshl.edu/meetings.asp...
- meeting dates: May 6 - 10, 2025
- abstract deadline: Feb 14, 2025
We hope to see you there for another great meeting with a fantastic speaker lineup!
meetings.cshl.edu/meetings.asp...
Biology of Genomes
Cold Spring Harbor Laboratory Meetings & Courses -- a private, non-profit institution with research programs in cancer, neuroscience, plant biology, genomics, bioinformatics.
meetings.cshl.edu
December 3, 2024 at 7:21 PM
Biology of Genomes 2025 is coming up:
- meeting dates: May 6 - 10, 2025
- abstract deadline: Feb 14, 2025
We hope to see you there for another great meeting with a fantastic speaker lineup!
meetings.cshl.edu/meetings.asp...
- meeting dates: May 6 - 10, 2025
- abstract deadline: Feb 14, 2025
We hope to see you there for another great meeting with a fantastic speaker lineup!
meetings.cshl.edu/meetings.asp...