Jesko Wagner
jeskowagner.genomic.social.ap.brid.gy
Jesko Wagner
@jeskowagner.genomic.social.ap.brid.gy
PhD researcher in Edinburgh, researching how to find better treatments faster.
https://jeskowagner.github.io
#Bioinformatics
#DrugDiscovery
#BioImaging
#Genomics

[bridged from https://genomic.social/@jeskowagner on the fediverse by https://fed.brid.gy/ ]
First discovered in 1993, thousands of microRNAs have been identified since. These small pieces of RNA can have important roles in our bodies. But of the thousands, it is unclear which ones have a biological role and which ones are just remnants of evolution. We applied all human and mouse […]
Original post on genomic.social
genomic.social
November 15, 2025 at 2:35 PM
We just published a new Python package for the single-cell analysis of morphological profiles! If you do microscope of cell populations and wish there were better solutions than averaging cell populations, now is the time! Built on the scverse, we bring analysis of imaging data into the […]
Original post on genomic.social
genomic.social
August 23, 2025 at 10:58 AM
Reposted by Jesko Wagner
I never understood why so many men associate with imagery of predatory animals.

My idealized version of my own masculinity is best represented by a tree. Patient. Immensely endurant. Self-sufficient. Unbothered by trivial, ephemereal affairs. Innately kind to the world around it.

I don't want […]
Original post on mastodon.social
mastodon.social
April 4, 2025 at 1:01 AM
Finally want to embark on moving to #selfhosted services. Any recommendations for blogs written by humans instead of AI slop? Pointers to software and hosting solutions also appreciated!

Ideally I'd move email and cloud backups such a photos over. Been thinking of setting up #nextcloud […]
Original post on genomic.social
genomic.social
February 18, 2025 at 1:28 PM
How do you balance priorities during job hunts? Specifically tradeoffs in personal growth, work conditions, and ethical considerations?

Looking for any experiences and dillemas you may have faced and how you tackled them.

#JobHunt #discussionwelcome
December 30, 2024 at 11:41 AM
If you're like me and use the scverse (scanpy, anndata and the like) a lot and need to pseudo-bulk every once in a while, you may have missed that scanpy now ships with built-in functionality for that: https://scanpy.readthedocs.io/en/stable/generated/scanpy.get.aggregate.html
Very useful!
November 12, 2024 at 10:53 AM