Jen Fleming
jen-fleming.bsky.social
Jen Fleming
@jen-fleming.bsky.social
I am the coordinator of the Protein Databank in Europe (PDBe) - Follow me and us @pdbeurope.bsky.social to find out all the cool things we are getting up to making data more accessible to help scientists do what they do best
Reposted by Jen Fleming
🔍✨ The Encyclopedia of Domains (TED) domain-level annotations of AlphaFold-predicted structures helps you interpret function! 🏗️🔬

Also:
🔹 Domain organization
🔹 Structural context (PAE plots)
🔹 Evolutionary links (CATH)

🔗 Explore
alphafold.ebi.ac.uk

#AlphaFold #TED #AI #Bioinformatics
March 3, 2025 at 8:28 PM
Reposted by Jen Fleming
🧬 Exciting AlphaFold DB updates:

✅ Bulk downloads – Up to 100 structures (PDB, mmCIF / JSON)
✅ pLDDT filtering – Find high-confidence models
✅ Table exports

📖 Read
www.sciencedirect.com/science/arti...

🔗 Explore
alphafold.ebi.ac.uk

#AlphaFold #AI #Bioinformatics #ProteinStructures
March 4, 2025 at 6:18 PM
Reposted by Jen Fleming
Zebrafish 🦓🐟 inspired artwork 🎨 by a Saffron Walden County High School student.

Zebrafish also help scientists 🥼 to understand cell growth & metabolism, e.g. Thioesterase Superfamily Member 2 (THEM2).

More ⬇️
www.ebi.ac.uk/pdbe/article...

#SciArt #NatureArt #PDBart
March 7, 2025 at 6:35 PM
Reposted by Jen Fleming
🚀 Exciting Opportunity 🚀
Do you have a passion for structural biology?

We're hiring at @PDBeurope! 🌟

Apply now to help annotate biological data 💻 🔬
🔗 embl.wd103.myworkdayjobs.com/en-US/EMBL/d...

Closing date: April 6, 2025

#JobOpening #StructuralBiology #Bioinformatics #ScienceJobs #Hiring
March 12, 2025 at 3:00 PM
Reposted by Jen Fleming
PDBe Coordinator, Jen Fleming, speaking at UK Parliament 🏛️ on open data's importance for:
🚀 fueling AI-driven innovations
💪 empowering researchers
➕ the impact of the collaboration between EMBL-EBI & Google DeepMind's #AlphaFold DB

#OpenData #Innovation #SciencePolicy #STEM #StructuralBiology
Great to see @pdbeurope.bsky.social Jen Fleming's presentation to the Commons SIT Committee on @ebi.embl.org 's data resources and AlphaFold committees.parliament.uk/event/23517/...
March 12, 2025 at 4:28 PM
Reposted by Jen Fleming
Great to see @pdbeurope.bsky.social Jen Fleming's presentation to the Commons SIT Committee on @ebi.embl.org 's data resources and AlphaFold committees.parliament.uk/event/23517/...
March 11, 2025 at 9:53 AM
Reposted by Jen Fleming
Did you know that the AlphaFold database (https://alphafold.ebi.ac.uk/) is brought to you by a collaboration between PDBe (part of EMBL-EBI; @ebi.embl.org) and Google DeepMind?

1️⃣ <a href="https://poll.blue/p/oDylFY/1" class="hover:underline text-blue-600 dark:text-sky-400 no-card-link" target="_blank" rel="noopener" data-link="bsky">yes, definitely
2️⃣ <a href="https://poll.blue/p/oDylFY/2" class="hover:underline text-blue-600 dark:text-sky-400 no-card-link" target="_blank" rel="noopener" data-link="bsky">was unsure
3️⃣ <a href="https://poll.blue/p/oDylFY/3" class="hover:underline text-blue-600 dark:text-sky-400 no-card-link" target="_blank" rel="noopener" data-link="bsky">no, had no idea

📊 Show results
November 22, 2024 at 10:36 AM
Reposted by Jen Fleming
🚨 Heads up! Our PDBeChem (www.ebi.ac.uk/pdbe-srv/pdbechem/) service will be retired later this month. 🚨

But don’t worry - explore our new PDBe-KB ligand pages!

Explore new features using this example Imatinib page:
➡️ wwwdev.ebi.ac.uk/pdbe-srv/pdbechem/chemicalCompound/show/STI

#PDBe-KB #ligands
November 5, 2024 at 2:34 PM
Reposted by Jen Fleming
Want more biological database resources & tools in your feed?

Welcome EMBL-EBI (@ebi.embl.org) to 🦋💙 Bluesky 🦋💙!

PDBe is part of EMBL-EBI & behind various resources:
- founding partner of the wwPDB,
- community-led PDBe-KB resource
- AlphaFold Protein Structure Database
(with Google DeepMind)
Not enough bioinformatics in your Bluesky feed? We’ve got you covered. Follow us for our latest news, exciting life science research, updates from our data resources, new tools and training resources.

Haven't heard of EMBL-EBI? Take a look at what we’re working on. www.ebi.ac.uk/about/our-im...
Our impact
We provide open data that helps scientists understand life and that informs solutions to real-world problems, such as infectious diseases, climate change and food security.
www.ebi.ac.uk
November 19, 2024 at 4:43 PM