HighlanderLab
@highlanderlab.bsky.social
Research on managing and improving populations at
@RoslinInstitute & @TheDickVet. Led by the chief Highlander @GregorGorjanc.
@RoslinInstitute & @TheDickVet. Led by the chief Highlander @GregorGorjanc.
Reposted by HighlanderLab
This is a joint work with @highlanderlab.bsky.social @gregorgorjanc.bsky.social
The software is available in github and will also be on CRAN as soon as the screening is cleared.
github.com/HighlanderLa...
The software is available in github and will also be on CRAN as soon as the screening is cleared.
github.com/HighlanderLa...
GitHub - HighlanderLab/RandPedPCA: Principal Component Analysis of Pedigree Relationship Matrix via Randomized SVD
Principal Component Analysis of Pedigree Relationship Matrix via Randomized SVD - HighlanderLab/RandPedPCA
github.com
March 19, 2025 at 12:55 PM
This is a joint work with @highlanderlab.bsky.social @gregorgorjanc.bsky.social
The software is available in github and will also be on CRAN as soon as the screening is cleared.
github.com/HighlanderLa...
The software is available in github and will also be on CRAN as soon as the screening is cleared.
github.com/HighlanderLa...
Reposted by HighlanderLab
Lastly I gave a short course on Stochastic simulations of breeding programmes with AlphaSimR - a teaser for our free on-line course www.edx.org/learn/animal...
EdinburghX: Breeding Programme Modelling with AlphaSimR | edX
Breeding programmes are key to the genetic improvement of plant varieties and animal breeds used in agriculture. This unique course shows how to model an existing or new breeding programme and the eva...
www.edx.org
February 3, 2025 at 10:57 AM
Lastly I gave a short course on Stochastic simulations of breeding programmes with AlphaSimR - a teaser for our free on-line course www.edx.org/learn/animal...
Reposted by HighlanderLab
I presented the work of Letícia Lara on Evaluation of selective breeding programme designs for black soldier fly larvae body weight (with María Martínez Castillero, Thiago Oliveira, Ivan Pocrnić, Jana Obšteter)
February 3, 2025 at 10:57 AM
I presented the work of Letícia Lara on Evaluation of selective breeding programme designs for black soldier fly larvae body weight (with María Martínez Castillero, Thiago Oliveira, Ivan Pocrnić, Jana Obšteter)
Reposted by HighlanderLab
Jana Obšteter presented the work of Laura Strachan on Optimizing pedigree reconstruction and patriline determination in honeybees (with Jernej Bubnič and Janez Presern)
February 3, 2025 at 10:57 AM
Jana Obšteter presented the work of Laura Strachan on Optimizing pedigree reconstruction and patriline determination in honeybees (with Jernej Bubnič and Janez Presern)
Reposted by HighlanderLab
Irene de Carlos Fernández presented her work on Modelling the Impact of Non-Native Honey Bee Importation on Native Apis mellifera mellifera Populations (with Laura Strachan, Grace McCormack, Jana Obšteter)
February 3, 2025 at 10:57 AM
Irene de Carlos Fernández presented her work on Modelling the Impact of Non-Native Honey Bee Importation on Native Apis mellifera mellifera Populations (with Laura Strachan, Grace McCormack, Jana Obšteter)
January 17, 2025 at 6:19 AM
Xinger (Evie) Tang presented a poster “A Pedigree-Based Method for Localization of Recombination Events”
January 17, 2025 at 6:15 AM
Xinger (Evie) Tang presented a poster “A Pedigree-Based Method for Localization of Recombination Events”
Jaime Ortiz Cuadros presented a poster “Accounting for uncertainty in Optimal Contribution Selection” - joint work with Josh Fogg, Julian Hall, and Ivan Pocrnic
January 17, 2025 at 6:15 AM
Jaime Ortiz Cuadros presented a poster “Accounting for uncertainty in Optimal Contribution Selection” - joint work with Josh Fogg, Julian Hall, and Ivan Pocrnic
Yu (Uni) Zhang presented a poster “How well must we characterise empirical populations for breeding simulations?”
January 17, 2025 at 6:15 AM
Yu (Uni) Zhang presented a poster “How well must we characterise empirical populations for breeding simulations?”
Hannes Becher presented a poster “Fast pedigree PCA with the randPedPCA R package”- joint work with @epigenci.bsky.social
January 17, 2025 at 6:15 AM
Hannes Becher presented a poster “Fast pedigree PCA with the randPedPCA R package”- joint work with @epigenci.bsky.social
Ros Craddock talked about “General Pedigree Tracking of Disease-causing Alleles for Recessive Monogenic Diseases in Dogs” - joint work with Joanna ilska, Cathryn Mellersh, Pam Wiener, and Audrey Martin
January 17, 2025 at 6:15 AM
Ros Craddock talked about “General Pedigree Tracking of Disease-causing Alleles for Recessive Monogenic Diseases in Dogs” - joint work with Joanna ilska, Cathryn Mellersh, Pam Wiener, and Audrey Martin
Gabriela Mafra Fortuna talked abou “Experience with Inferring Ancestral Recombination Graph of the Global Cattle Population” - joint work with Jana Obsteter
January 17, 2025 at 6:15 AM
Gabriela Mafra Fortuna talked abou “Experience with Inferring Ancestral Recombination Graph of the Global Cattle Population” - joint work with Jana Obsteter
We thank the support from @roslininstitute @TheDickVet @EdinburghUni @BBSRC @TRAINatEd_MSCA @EdinInnovations @Bayer4Crops @UniNewEngland. Fin.
February 12, 2024 at 4:38 AM
We thank the support from @roslininstitute @TheDickVet @EdinburghUni @BBSRC @TRAINatEd_MSCA @EdinInnovations @Bayer4Crops @UniNewEngland. Fin.
All course material is available at: jvanderw.une.edu.au/aabc2024.htm - enjoy your independent study;)
February 12, 2024 at 4:37 AM
All course material is available at: jvanderw.une.edu.au/aabc2024.htm - enjoy your independent study;)
Day 5 returned to topics of Day 1 by diving into Ancestral Recombination Graphs (ARGs), coalescent simulations, and fitting linear mixed models on tree structures, including our current experiences in working with ARGs in agricultural datasets.
February 12, 2024 at 4:37 AM
Day 5 returned to topics of Day 1 by diving into Ancestral Recombination Graphs (ARGs), coalescent simulations, and fitting linear mixed models on tree structures, including our current experiences in working with ARGs in agricultural datasets.
This part used FieldSimR available at cran.r-project.org/package=Fiel... and GxE simulations desribed in doi.org/10.21203/rs....
February 12, 2024 at 4:37 AM
This part used FieldSimR available at cran.r-project.org/package=Fiel... and GxE simulations desribed in doi.org/10.21203/rs....
Day 4 dived into plant breeding trials, experimental design, spatial variation, genotype by environment (GxE) interactions, and how to simulate and model these sources of variation.
February 12, 2024 at 4:37 AM
Day 4 dived into plant breeding trials, experimental design, spatial variation, genotype by environment (GxE) interactions, and how to simulate and model these sources of variation.