Gyana Prakash Mahapatra
@gyanaprakash.bsky.social
Ph.D Student @Schuller Lab @Uni_Marburg | Structural Biologist | McGill University Alumnus | #Photosynthesis 🌱 #CryoEM/ET❄🔬 #Biochemistry🧬 🇮🇳->🇨🇦->🇩🇪
Reposted by Gyana Prakash Mahapatra
Time for a thread!🧵 How different is the molecular organization of thylakoids in “higher” plants🌱? To find out, we teamed up with @profmattjohnson.bsky.social to dive into spinach chloroplasts with #CryoET ❄️🔬. Curious? ..Read on!
#TeamTomo #PlantScience 🧪 🧶🧬 🌾
elifesciences.org/articles/105...
1/🧵
#TeamTomo #PlantScience 🧪 🧶🧬 🌾
elifesciences.org/articles/105...
1/🧵
September 25, 2025 at 6:00 PM
Time for a thread!🧵 How different is the molecular organization of thylakoids in “higher” plants🌱? To find out, we teamed up with @profmattjohnson.bsky.social to dive into spinach chloroplasts with #CryoET ❄️🔬. Curious? ..Read on!
#TeamTomo #PlantScience 🧪 🧶🧬 🌾
elifesciences.org/articles/105...
1/🧵
#TeamTomo #PlantScience 🧪 🧶🧬 🌾
elifesciences.org/articles/105...
1/🧵
Reposted by Gyana Prakash Mahapatra
Cryo-EM structure of Chlamydomonas Photosystem I complexedwith the alternative electron donor cytochrome c6 www.biorxiv.org/content/10.1101/2025.09.08.674899v1 #cryoem
September 9, 2025 at 7:10 AM
Cryo-EM structure of Chlamydomonas Photosystem I complexedwith the alternative electron donor cytochrome c6 www.biorxiv.org/content/10.1101/2025.09.08.674899v1 #cryoem
Reposted by Gyana Prakash Mahapatra
Our new preprint: how photoprotection is spatially coordinated with energy metabolism. Photosystem I is major source of radicals. We report EM structure of PSI in complex with superoxide dismutase SOD: direct link between energy conversion & oxidative stress defence
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
July 7, 2025 at 6:03 AM
Our new preprint: how photoprotection is spatially coordinated with energy metabolism. Photosystem I is major source of radicals. We report EM structure of PSI in complex with superoxide dismutase SOD: direct link between energy conversion & oxidative stress defence
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
Reposted by Gyana Prakash Mahapatra
Let's unpack what our new ferredoxin paper is about, shall we?
✨ She et al., Adv. Sci. (2025) doi.org/10.1002/advs...
✨ She et al., Adv. Sci. (2025) doi.org/10.1002/advs...
a cartoon drawing of a genie holding a snake and a boat
ALT: a cartoon drawing of a genie holding a snake and a boat
media.tenor.com
June 26, 2025 at 11:50 AM
Let's unpack what our new ferredoxin paper is about, shall we?
✨ She et al., Adv. Sci. (2025) doi.org/10.1002/advs...
✨ She et al., Adv. Sci. (2025) doi.org/10.1002/advs...
Reposted by Gyana Prakash Mahapatra
We have a preprint for you
EHD2 forms rings on caveolae necks, in contrast to most EHDs forming helices. We determined its structure on membranes and show that N-term acts as a spacer
By Elena, Vasya @vasiliimikirtumov.bsky.social, Jeff &Oli Daumke www.biorxiv.org/content/10.1...
EHD2 forms rings on caveolae necks, in contrast to most EHDs forming helices. We determined its structure on membranes and show that N-term acts as a spacer
By Elena, Vasya @vasiliimikirtumov.bsky.social, Jeff &Oli Daumke www.biorxiv.org/content/10.1...
June 8, 2025 at 11:22 AM
We have a preprint for you
EHD2 forms rings on caveolae necks, in contrast to most EHDs forming helices. We determined its structure on membranes and show that N-term acts as a spacer
By Elena, Vasya @vasiliimikirtumov.bsky.social, Jeff &Oli Daumke www.biorxiv.org/content/10.1...
EHD2 forms rings on caveolae necks, in contrast to most EHDs forming helices. We determined its structure on membranes and show that N-term acts as a spacer
By Elena, Vasya @vasiliimikirtumov.bsky.social, Jeff &Oli Daumke www.biorxiv.org/content/10.1...
Reposted by Gyana Prakash Mahapatra
Proud to present the lab's latest work. The full structure of the sodium translocating methyltransferase (Mtr) bound to a small oxygen-responsive small protein MtrI. Work by Tristan and together with @schmitzstreitslab.bsky.social .
www.biorxiv.org/content/10.1101/2025.06.02.657420v1
www.biorxiv.org/content/10.1101/2025.06.02.657420v1
June 4, 2025 at 7:10 PM
Proud to present the lab's latest work. The full structure of the sodium translocating methyltransferase (Mtr) bound to a small oxygen-responsive small protein MtrI. Work by Tristan and together with @schmitzstreitslab.bsky.social .
www.biorxiv.org/content/10.1101/2025.06.02.657420v1
www.biorxiv.org/content/10.1101/2025.06.02.657420v1
Reposted by Gyana Prakash Mahapatra
Ross @milton-group.bsky.social came up with a very similar idea: how about introducing cyanophenylalanine to a (bacterial) ferredoxin that binds two [4Fe-4S] clusters?
One might learn where the electron resides as most ferredoxins are considered one-electron redox mediators... 🧵
One might learn where the electron resides as most ferredoxins are considered one-electron redox mediators... 🧵
First off, let me highlight recent work from Vincent et al.: the authors modified plant ferredoxin with cyanophenylalanine and succeeded in measuring FeS-redox-dependent nitrile band shifts in the IR spectra.
May 21, 2025 at 6:59 PM
Ross @milton-group.bsky.social came up with a very similar idea: how about introducing cyanophenylalanine to a (bacterial) ferredoxin that binds two [4Fe-4S] clusters?
One might learn where the electron resides as most ferredoxins are considered one-electron redox mediators... 🧵
One might learn where the electron resides as most ferredoxins are considered one-electron redox mediators... 🧵
Reposted by Gyana Prakash Mahapatra
Pleased to share my very general review of Photosynthesis now published in Nature Reviews Mol Cell Biol
🌞🌱
rdcu.be/em1lz Hopefully a useful primer for Postgrad and undergrad students
🌞🌱
rdcu.be/em1lz Hopefully a useful primer for Postgrad and undergrad students
Structure, regulation and assembly of the photosynthetic electron transport chain
Nature Reviews Molecular Cell Biology - The electron transfer chain in chloroplast thylakoid membranes uses solar energy to produce NADPH and ATP, which power carbon fixation into biomass. This...
rdcu.be
May 21, 2025 at 5:40 PM
Pleased to share my very general review of Photosynthesis now published in Nature Reviews Mol Cell Biol
🌞🌱
rdcu.be/em1lz Hopefully a useful primer for Postgrad and undergrad students
🌞🌱
rdcu.be/em1lz Hopefully a useful primer for Postgrad and undergrad students
Reposted by Gyana Prakash Mahapatra
Happy to present the lab latest work, today from the green-side. The ultimate PSII assembly intermediate that directly precedes incorporation of the Mn4O5Ca cluster and formation of the OEC. Psb32 binds to PsbV, challenging the assumption the extrinsic subunits all associate spontaneously in-vivo.
May 12, 2025 at 5:50 AM
Happy to present the lab latest work, today from the green-side. The ultimate PSII assembly intermediate that directly precedes incorporation of the Mn4O5Ca cluster and formation of the OEC. Psb32 binds to PsbV, challenging the assumption the extrinsic subunits all associate spontaneously in-vivo.
Reposted by Gyana Prakash Mahapatra
I know there are more important things to worry about right now... but it really pisses me off coming across things like this in the literature.
Nominally 4.8 Å map... check out Fig S1 😬
(also check out any other #cryoem paper by same group, ~all in BBRC)
www.sciencedirect.com/science/arti...
Nominally 4.8 Å map... check out Fig S1 😬
(also check out any other #cryoem paper by same group, ~all in BBRC)
www.sciencedirect.com/science/arti...
April 10, 2025 at 2:25 PM
I know there are more important things to worry about right now... but it really pisses me off coming across things like this in the literature.
Nominally 4.8 Å map... check out Fig S1 😬
(also check out any other #cryoem paper by same group, ~all in BBRC)
www.sciencedirect.com/science/arti...
Nominally 4.8 Å map... check out Fig S1 😬
(also check out any other #cryoem paper by same group, ~all in BBRC)
www.sciencedirect.com/science/arti...
Reposted by Gyana Prakash Mahapatra
Do you want to join the team? I just got awarded a 2 year fully funded Postdoc position to investigate the metabolism of anaerobic pathogenic bacteria. If you have a strong background in protein biochemistry or anaerobes shown by solid publications, reach out. Job add follows, please repost.
April 17, 2025 at 8:33 PM
Do you want to join the team? I just got awarded a 2 year fully funded Postdoc position to investigate the metabolism of anaerobic pathogenic bacteria. If you have a strong background in protein biochemistry or anaerobes shown by solid publications, reach out. Job add follows, please repost.
Reposted by Gyana Prakash Mahapatra
For decades, how methanogenic archaea activate the MCR complex to produce methane remained a mystery. Today in Nature, we report the high-resolution cryo-EM structure of the MCR activation complex!
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Structure of the ATP-driven methyl-coenzyme M reductase activation complex - Nature
The structure and function of the MCR activation complex from Methanococcus maripaludis were revealed, demonstrating its ATP-dependent ability to activate MCR and form methane while uncovering a uniqu...
www.nature.com
April 16, 2025 at 3:15 PM
For decades, how methanogenic archaea activate the MCR complex to produce methane remained a mystery. Today in Nature, we report the high-resolution cryo-EM structure of the MCR activation complex!
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Reposted by Gyana Prakash Mahapatra
Excited to share our latest work on the structure and mechanism of the ancient sodium-pumping Rnf complex.
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Molecular principles of redox-coupled sodium pumping of the ancient Rnf machinery - Nature Communications
The Rnf complex is a key respiratory enzyme of anaerobes and nitrogen-fixing bacteria. Here, the authors combine structural, computational, and biochemical experiments to probe the unique redox-couple...
www.nature.com
March 7, 2025 at 7:57 PM
Excited to share our latest work on the structure and mechanism of the ancient sodium-pumping Rnf complex.
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Reposted by Gyana Prakash Mahapatra
First bluesky post! About time.
This week, our manuscript revealing the structure, inhibition, and mechanism of human Ceramide Synthase 6 was finally published in NSMB.
We combined cryo-EM and mass spectrometry to reveal its ping-pong mechanism. Check it out!
doi.org/10.1038/s415...
This week, our manuscript revealing the structure, inhibition, and mechanism of human Ceramide Synthase 6 was finally published in NSMB.
We combined cryo-EM and mass spectrometry to reveal its ping-pong mechanism. Check it out!
doi.org/10.1038/s415...
November 13, 2024 at 8:05 PM
First bluesky post! About time.
This week, our manuscript revealing the structure, inhibition, and mechanism of human Ceramide Synthase 6 was finally published in NSMB.
We combined cryo-EM and mass spectrometry to reveal its ping-pong mechanism. Check it out!
doi.org/10.1038/s415...
This week, our manuscript revealing the structure, inhibition, and mechanism of human Ceramide Synthase 6 was finally published in NSMB.
We combined cryo-EM and mass spectrometry to reveal its ping-pong mechanism. Check it out!
doi.org/10.1038/s415...
Reposted by Gyana Prakash Mahapatra
Want to be amazed by how a symbiont can be located at the center of a cell while still being an epibiont! Please read and be amazed by the symbiosis between Anaerameoba and sulfate-reducing bacteria!
Now out in Nature Communications (open access)! rdcu.be/dZGNe
(1/11)
Now out in Nature Communications (open access)! rdcu.be/dZGNe
(1/11)
A unique symbiosome in an anaerobic single-celled eukaryote
Nature Communications - Symbiont-housing structures are well-studied in multicellular eukaryotes but rarely in unicellular protists. This study shows that low-oxygen-adapted Anaeramoebae have...
rdcu.be
November 11, 2024 at 10:47 PM
Want to be amazed by how a symbiont can be located at the center of a cell while still being an epibiont! Please read and be amazed by the symbiosis between Anaerameoba and sulfate-reducing bacteria!
Now out in Nature Communications (open access)! rdcu.be/dZGNe
(1/11)
Now out in Nature Communications (open access)! rdcu.be/dZGNe
(1/11)