Gisela Gabernet
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ggabernet.bsky.social
Gisela Gabernet
@ggabernet.bsky.social
340 followers 750 following 5 posts
Computational Immunologist @Yale School of Medicine
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ggabernet.bsky.social
Do you want to share your research using Immcantation? Abstract submission for the Immcantation Users Meeting 2026 is now open until October 1st!
fanofactor.bsky.social fanofactor 🧬💻 @fanofactor.bsky.social · Aug 28
🚨 Immcantation.org user or interested in #Bcell repertoire analysis?
🗓️ Join the FREE virtual 2026 Immcantation Users Group Meeting
📅 Jan 22, 2026 | ⏰ 10AM–1:30PM ET
📢 Abstracts due Oct 1, 2025
🔗 immcantation.github.io/users-meeting/2026

#AIRRseq #Immcantation
2026 Immcantation Users Group Meeting. Important information summary: Who: open to the public When: January 22nd, 2026 Time: 10:00 am - 1:30 pm ET Where: Virtual Fee: Free Abstracts due: October 1st, 2025 Final program: December 1st, 2025
September 9, 2025 at 1:34 PM
ggabernet.bsky.social
Interested in analyzing BCR / TCR single-cell or bulk datasets? Join the hands-on training on using nf-core/airrflow, a Nextflow pipeline to process start-to-finish AIRRseq data using the Immcantation framework.

🕑 June 12th 10-11:30 ET
💻 Virtual
💸 It's free!

Registration: nf-co.re/events/2025/...
nf-core/airrflow metro map showing the included analysis steps.
May 28, 2025 at 1:21 AM
ggabernet.bsky.social
At #AAI2025 and interested in high-throughput BCR/TCR single cell and bulk data analysis? Come talk to me at poster #408 from 14:15 to 15:30! I’ll be presenting nf-core/airrflow, a Nextflow workflow using the Immcantation framework @immcantation.bsky.social @nf-co.re
May 4, 2025 at 5:16 PM
Reposted by Gisela Gabernet
hipcproject.bsky.social
Coming to @aai.org in Honolulu? 🌴🔬
Join #symposium May 6 at 8:30 a.m.
Also booths #535 #537, shared with
@iedb.bsky.social
@airr-community.bsky.social
#AAI2025
Speakers include
@settelab.bsky.social
@lungdrc.bsky.social
@victoriazyulina.bsky.social

immunology2025.aai.org/guest-sympos...
a neon sign of palm trees and a surfboard on a brick wall
Alt: a neon sign of palm trees and a surfboard on a brick wall
media.tenor.com
April 28, 2025 at 5:43 PM
ggabernet.bsky.social
Do you analyze large BCR and TCR sequencing datasets?

Answer our survey for improving nf-core/airrflow, a Nextflow pipeline to analyze bulk and single-cell AIRRseq data (doi.org/10.1371/jour...). We’re interested in your opinion on useful new features!

yalesurvey.ca1.qualtrics.com/jfe/form/SV_...
nf-core/airrflow: An adaptive immune receptor repertoire analysis workflow employing the Immcantation framework
Author summary We have created nf-core/airrflow, a workflow to help researchers study the immune system in healthy and disease states, such as infections, autoimmunity, and cancer. The adaptive immune...
doi.org
March 31, 2025 at 2:41 PM
Reposted by Gisela Gabernet
marcveld.bsky.social
Persistence of spike protein at the skull-meninges-brain axis may contribute to the neurological sequelae of COVID-19

Some unrest and abuse about this paper- Parts of the pre-print have been abused previously. What does it show?

www.cell.com/cell-ho...
1/10
November 30, 2024 at 9:03 AM
Reposted by Gisela Gabernet
drstevenmwhite.bsky.social
Impressive! www.nature.com/articles/d41...
This malaria vaccine is delivered by a mosquito bite
Bites from insects infected with modified malaria parasites boosted immunity and stopped people from contracting the disease.
www.nature.com
November 29, 2024 at 7:31 PM
Reposted by Gisela Gabernet
itaiyanai.bsky.social
Doing good science is 90% finding a science buddy to constantly talk to about the project.
November 9, 2024 at 10:53 PM
Reposted by Gisela Gabernet
jamieheather.bsky.social
Inspired by @rodrahimi.bsky.social 's noble efforts linking immunologists together over here, let's try and get more specifically TCR/BCR/AIRR/repertoire chat going with this starter park
go.bsky.app/Gi2dcGd
Drop me a beep to get added or suggest others!
November 18, 2024 at 5:21 AM