Gabin Piton
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gabin-piton.bsky.social
Gabin Piton
@gabin-piton.bsky.social
Researcher at UMR Eco&Sols, INRAE Montpellier, France, interested in belowground (agro)ecosystem functioning | Plant and microbial trait based ecology | Deep soil | Also manage our lab's account @umr-ecosols.bsky.social
Reposted by Gabin Piton
📣📣📣2 years Postdoc position available !
Modelling of soil organic matter dynamics with STICS model !
Job info :
👉 jobs.inrae.fr/en/ot-27470

Part of the large ALAMOD project : www.pepr-faircarbon.fr/projets/proj...

#soilcarbon #soil #model #Postdoc
Postdoctoral researcher: modelling of soil organic matter dynamics
You will be welcomed in the Joint Research Unit Eco&Sols in Montpellier (France), which has 70 permanent staff from INRAE, IRD, Institut Agro Montpellier and Cirad. You will join the ALAMOD project, which aims to compare and improve models of carbon dynamics at the ecosystem level.Your mission will be to evaluate and improve the STICS model in simulating the soil organic matter dynamics. STICS is a soil-crop model that simulates crop growth, as well as the water, carbon, and nitrogen balances at the plot level. It is being developed by a community of scientists from different disciplines.You will be more specifically in charge of:Evaluating the STICS model’s ability to simulate the long-term dynamics of soil organic matter (carbon and nitrogen stocks) in a variety of agricultural situations, soils and climates. You will use a dataset from long-term experiments, which is under development in the ALAMOD project, and you will also help to complete it.Evaluating and improving the simulation of plant litter decomposition in the short and long term using the STICS model. You will modify and calibrate the decomposition module of STICS it to improve the model’s genericity and better account for certain situations (e.g. crop residues left on the soil surface, soil with a low mineral nitrogen availability, etc.). You will use a dataset gathering data on the decomposition of various plant litters under controlled (laboratory incubations) and field conditions. Modifications to the model formalisms will be carried out in collaboration with the IT pole of the STICS team.Writing publications.
jobs.inrae.fr
September 23, 2025 at 12:15 PM
Reposted by Gabin Piton
🌱 15-month Postdoc Position @umr-ecosols.bsky.social
Mucoromycotina mycorrhizal fungi: Forgotten symbioses for the agroecological transition?

High-risk/high-gain project to uncover the secrets of ancient, widespread plant–fungus partnerships — little studied, yet full of potential.
15-month Postdoctoral Position – Microbial Ecology & Mycorrhizal Symbioses - sfecologie.org
Context Arbuscular mycorrhizal fungi (G-AMF, Glomeromycotina) are well known for improving plant nutrition and resilience, yet their practical use in agriculture remains limited. Recent taxonomic reas...
sfecologie.org
August 18, 2025 at 7:22 AM
We lack estimates of root carbon stocks in temperate agroforestry systems. To get such estimates for crops, perennial herbaceous and trees, we dug deep pits in the stony Mediterranean soil of our young agroforestry experimental system and sorted out all their roots! The results in this new paper :
July 22, 2025 at 2:21 PM
Reposted by Gabin Piton
First paper we've found that validates auxotrophy predictions from genomes. in non-host associated communities (e.g. soils) auxotrophy is rare. I believe the assumption of prevalent auxotrophies emerging out of pervasive cross-feeding needs to be reconsidered.. www.nature.com/articles/s41...
Taxonomic and environmental distribution of bacterial amino acid auxotrophies - Nature Communications
Many microorganisms are auxotrophic, that is, unable to synthesize the compounds they require for growth. Here, Ramoneda et al. predict amino acid biosynthetic capabilities of over 26,000 bacterial ge...
www.nature.com
July 10, 2025 at 8:49 AM
Un plaisir d'écrire ces chroniques radio avec Tiphaine Chevalier 👇
June 19, 2025 at 12:32 PM
Reposted by Gabin Piton
Our new paper is out to day in Nature Ecology and Evolution!

It is called: Thresholds of functional trait diversity driven by land use intensification

⬇️
www.nature.com/articles/s41...
#FunctionalTraits 🌐 ➕📏

@inrae-france.bsky.social @urep.bsky.social @cnrsecologie.bsky.social @bexplo.bsky.social
Thresholds of functional trait diversity driven by land use intensification - Nature Ecology & Evolution
Land use intensification is a major driver of biodiversity change and ecosystem functioning. Here the authors identify thresholds of grassland plant community structure and stability in response to la...
www.nature.com
June 3, 2025 at 1:06 PM
Reposted by Gabin Piton
Reposted by Gabin Piton
La nouvelle chronique "sols" sur @euradio.bsky.social est disponible.
Elle porte sur la respiration du sol.
En deux épisodes écrits avec @gabin-piton.bsky.social (Eco&Sols) :
euradio.fr/emission/9wD...
La respiration du sol (épisode 1)
Cette semaine, Tiphaine Chevalier nous parle du sol qui respire et des 5 éléments nécessaires à sa santé.
euradio.fr
May 13, 2025 at 7:52 AM
Reposted by Gabin Piton
Is #RegenerativeAgriculture the solution to delivering for both food and nature?

A new report by the British Ecological Society brings together 40 academics, practitioners and farmers across the UK to explore the evidence. 👇

https://shorturl.at/s9TM4
April 2, 2025 at 9:11 AM
April 2, 2025 at 7:19 AM
Reposted by Gabin Piton
A new study led by @fabien-ferchaud.bsky.social estimated soil organic carbon storage rates of perennial bioenergy crops between 0.26 tC/ha/yr (North France) and 0.96 tC/ha/yr (South France), mainly explained by higher C inputs but weakened by associated SOC priming.

Check it out on open access 👇
📣New paper in Agriculture, Ecosystems & Environment:

Conversion of arable land to perennial bioenergy crops increases soil organic carbon stocks on the long term.

🌱Results from 2 long-term experiments in France with miscanthus and switchgrass.

Open access ➡️ doi.org/10.1016/j.ag...
March 31, 2025 at 2:13 PM
New paper in diamond open-access @peercomjournal.bsky.social
Reducing mineral fertilizer use in mountain grasslands could improve the ability of their soil to maintain their multifunctionality during drought.
Last chapter of my PhD 5 y latter. #NewPI never give up publish your science! #Soilscience
March 12, 2025 at 4:04 PM
Reposted by Gabin Piton
À l'occasion de la Journée internationale des droits des femmes, l'@ird-fr.bsky.social met en lumière les expériences et réflexions de 4 chercheuses, sur la place des femmes dans les sciences.

1. Lydie LARDY - Chercheuse en sciences du sol (IRD) dans notre unité, affectée en Côte d’Ivoire.

2...
🧵
March 10, 2025 at 1:20 PM
Reposted by Gabin Piton
📢2 postdoc positions with Nick Bouskill at OSU: on disturbance and microbes hr.oregonstate.edu/open-postdoc... and on hillslopes and biogechemical processes (modelling) hr.oregonstate.edu/open-postdoc...
NJB Microbiome Project | Office of University Human Resources
hr.oregonstate.edu
March 6, 2025 at 10:27 AM
Interested in ultra long read #Metagenomic and Metagenome-assembled genomes (MAGs) from soils ? Our new protocol is for you ! 👇
🧬A world record for soil DNA N50 (mean sequence length)! 🎉Our PhD student Arthur Cousson has developed a new protocol for nanopore sequencing that yields ultra-pure DNA 3 to 7 times larger than previously published protocols. A key step in resolving the genomes of uncultivated microbes. #metagenomic
Ultra pure high molecular weight DNA from soil for Nanopore shotgun metagenomics and metabarcoding sequencing
Soil microbes are among the most abundant and diverse organisms on Earth but remain poorly characterized. New technologies have made possible to seque…
www.sciencedirect.com
February 19, 2025 at 5:59 PM
Reposted by Gabin Piton
www.nature.com/articles/s41...
While not all new soil carbon persists, 'sequestered', in the soil, there are ways to confidently measure durable new carbon fractions and increase confidence in measurements of soil carbon as a climate solution, when measured correctly. #soil #science #carbon
Decadal persistence of grassland soil organic matter derived from litter and pyrogenic inputs - Nature Geoscience
Plant litter-derived mineral-associated organic matter that formed in the first year and pyrogenic organic inputs both persist on a decadal scale in grassland soil via distinct mechanisms, according t...
www.nature.com
February 10, 2025 at 9:43 PM
Reposted by Gabin Piton
Interesting paper. This inference stood out for me:

"Result suggests a fitness paradox whereby some bacteria can optimize fitness in soil by minimizing mortality rather than maximizing growth."

academic.oup.com/ismecommun/a...
Dynamics of bacterial growth, and life-history tradeoffs, explain differences in soil carbon cycling due to land-use
Abstract. Soil contains a considerable fraction of Earth’s organic carbon. Bacterial growth and mortality drive the microbial carbon pump, influencing carb
academic.oup.com
February 3, 2025 at 1:03 PM
Meta-analysis out! Complementarity hypothesis appeared reversed for species mixture effect on SOC. We found that high root mycorrhization and tissue density have + effect on SOC. And combining similar values for these traits seems preferable ! Important finding for climate mitigation strategy.
The complementarity hypothesis reversed: root trait similarity in species mixtures promotes soil organic carbon in agroecosystems
Increasing species diversity in agroecosystems appears as a promising venue to restore or increase soil organic carbon (SOC). It has been hypothesized…
www.sciencedirect.com
February 3, 2025 at 10:22 AM
My morning read. A must! All the results in this paper are so interesting and the writing is so clear. And I agree 100% with the related post by @frantecol.bsky.social Good sciences take time, but our system makes it very difficult. In this case, it was so worth keeping up the effort. Inspiring!
Science takes time - a lot of time. Time that is more and more difficult to make available because of increased workloads. Time that exceeds the temporary contracts of postdocs and PhDs.

I'll illustrate this using our paper published in Nature yesterday. 🧵 (1/x)
www.nature.com/articles/s41...
Soil microbiomes show consistent and predictable responses to extreme events - Nature
Soils from 30 grasslands across Europe were subjected to 4 contrasting extreme climatic events under drought, flood, freezing and heat conditions, with the results suggesting that soil microbiomes fro...
www.nature.com
January 31, 2025 at 9:36 AM
Reposted by Gabin Piton
Really nice to see the second paper of PhD student Fangbin Hou out in SBB!!!

She did a massive experiment and found that across 17 grassland species, root exudates from plants that experienced drought trigger more microbial respiration. (1)
www.sciencedirect.com/science/arti...
Root exudates from drought-affected plants increase soil respiration across a range of grassland species
Root exudates play an important role in ecosystem carbon (C) cycling. Drought can alter the quality and quantity of root exudation, but it is not clea…
www.sciencedirect.com
January 30, 2025 at 10:31 AM
I also set up an account for my unit Eco&Sols.
Follow us : @umr-ecosols.bsky.social !
70 permanent staff and many brilliant students & postdocs working on functional ecology and biogeochemistry in agroecosystems, from the biodiversity in soil aggregates to plant-soil interactions & global C cycle.
January 29, 2025 at 8:18 AM
Hi bluesky! I will only share news on my research here. My main topics are microbial ecology and biogeochemistry. My current research digs into the functioning of root-soil system in deep horizons of agroforestry systems and the global life history strategies of soil bacteria.
Recent publications 👇
Life history strategies of soil bacterial communities across global terrestrial biomes - Nature Microbiology
Analysis of metagenomes from across the globe reveals the spectrum of soil microbial functional diversity based on community aggregated traits.
www.nature.com
January 28, 2025 at 4:29 PM