Daniel Friedrich
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friedrichlab.bsky.social
Daniel Friedrich
@friedrichlab.bsky.social
Research Group Leader @chemunicologne.bsky.social‬ at University of Cologne (@unicologne.bsky.social‬) in Biomolecular #NMR Spectroscopy | We are interested in structural analysis of proteins, peptides and nucleic acids.
https://nmr.chemie.uni-koeln.de/
Very nice article from @lek-lab.bsky.social including @roesslph.bsky.social, A. Sever and R. Ahmed, enjoyed reading it! #NMR
November 10, 2025 at 5:53 PM
Fantastic opportunity to work on exciting projects with a great team @etzkornlab.bsky.social!
We are hiring!
The Etzkorn Lab is looking for up to 7 highly motivated PostDocs and 1-2 PhD candidates to support our endeavour to translate the DNAzyme technology into therapeutic applications. For more information see: www.ipb.hhu.de/fileadmin/re...

Please repost. #Postdoc, @hhu.de
November 5, 2025 at 3:55 PM
Reposted by Daniel Friedrich
📢 Open Call! The Max Perutz Labs invite applications for a Full Professorship in Integrative Structure Biology with a focus on in situ structural biology using cryo-electron tomography (cryo-ET) and related methods. More details ➡️ tinyurl.com/brswbymu
October 31, 2025 at 9:24 AM
Reposted by Daniel Friedrich
We have progressed from data collection to data analysis.
November 1, 2025 at 12:31 AM
Reposted by Daniel Friedrich
Darja combines organic-chemistry synthesis (with our great collaborator Roman Lichtenecker) of specifically isotope-labeled amino acids with protein NMR in solution and solids.
👉 Synthesis and proof of principle is here: chemistry-europe.onlinelibrary.wiley.com/doi/full/10....

2/n
Synthesis of Selectively 13C/2H/15N‐ Labeled Arginine to Probe Protein Conformation and Interaction by NMR Spectroscopy
We offer a new labeling approach to introduce isolated 15N−13C−1H spin systems to the side chains of arginine residues. The labeling scheme delivers high-resolution NMR spectra to study large protein....
chemistry-europe.onlinelibrary.wiley.com
October 8, 2025 at 6:12 PM
Reposted by Daniel Friedrich
Really interesting to see some basic science research coming out of Apple Inc. SimpleFold: Folding Proteins is Simpler than You Think arxiv.org/abs/2509.184...

tldr: Apple used flow matching models to more efficiently predict protein folding structures.

More of this, please... from ALL big tech.
SimpleFold: Folding Proteins is Simpler than You Think
Protein folding models have achieved groundbreaking results typically via a combination of integrating domain knowledge into the architectural blocks and training pipelines. Nonetheless, given the suc...
arxiv.org
September 25, 2025 at 1:14 AM
Congratulations to the Behrmann and Schwarz labs at Institute of Biochemistry @chemunicologne.bsky.social for this fantastic work! 🎉 #StructuralBiology in Cologne is on fire 💥
🧠 How Synapses Hold Together 🤝

This #discovery was made by a research team @bccologne.bsky.social studying the molecular architecture of #synapses. The study shows that the protein #gephrin forms flexible filaments in the brain, serving as an important building block of inhibitory synapses.
September 24, 2025 at 7:47 PM
I enjoyed the talk by Harald Schwalbe @schwalbe-lab.bsky.social very much, especially the #NMR work on #RNA structure and dynamics! #FGMR #GDCh
At the 2025 meeting of the German focus group of Magnetic Resonance (FGMR, EPR/NMR), Harald Schwalbe, Instruct-director, introduced access possibilities and highlighted the recent installation of the German Instruct centre.

@instruct-eric.bsky.social @gdch.de

#NMR #EPR #FGMR #GDCh #InstructERIC
September 16, 2025 at 1:48 PM
Reposted by Daniel Friedrich
Postdoctoral position in viral protein NMR, Prof Anja Böckmann, The protein solid-state NMR laboratory within the Molecular Microbiology and Structural Biochemistry (MMSB) unit in the Lyon Gerland Bioscience Campus mmsb.cnrs.fr/en/

emploi.cnrs.fr/Offres/CDD/U... #NMRjobs #NMRchat 🧲
Portail Emploi CNRS - Offre d'emploi - Postdoctoral position in viral protein NMR (M/F)
emploi.cnrs.fr
September 12, 2025 at 1:03 PM
Very nice work by the Wöhnert group, determining an intersting RNA structure using #NMR!
Exciting work from Duchardt-Ferner et al. in NAR: high-res. NMR structure of a tobramycin-responsive riboswitch. Shows a novel aminoglycoside-binding RNA motif with unique RNA-RNA contacts, explaining its exceptional switching efficiency in eukaryotic translation.
academic.oup.com/nar/article/...
Structural basis for ligand recognition in the tobramycin riboswitch
Abstract. Recently, a novel tobramycin-responsive riboswitch was developed by a combination of Capture-SELEX and in vivo screening. This riboswitch regulat
academic.oup.com
September 8, 2025 at 7:19 PM
Reposted by Daniel Friedrich
Exciting work from Duchardt-Ferner et al. in NAR: high-res. NMR structure of a tobramycin-responsive riboswitch. Shows a novel aminoglycoside-binding RNA motif with unique RNA-RNA contacts, explaining its exceptional switching efficiency in eukaryotic translation.
academic.oup.com/nar/article/...
Structural basis for ligand recognition in the tobramycin riboswitch
Abstract. Recently, a novel tobramycin-responsive riboswitch was developed by a combination of Capture-SELEX and in vivo screening. This riboswitch regulat
academic.oup.com
September 8, 2025 at 3:14 PM
Reposted by Daniel Friedrich
New publication: Arginine dynamics probed by magic-angle spinning NMR with a specific isotope-labeling scheme

Our selective arginine labeling yields well-resolved 1H-detected spectra in solids (and solution). We apply it to study dynamics in crystalline ubiquitin and a >130 kDa large enzyme

1/2
August 25, 2025 at 5:43 AM
Very interesting #NMR work on disordered proteins by the lab of @millessigrid.bsky.social at @fmp-berlin.de! Enjoyed reading it, congrats to this study!
August 21, 2025 at 11:57 AM
Reposted by Daniel Friedrich
📣 Massively proud of this ⬇️ great study, led by the brilliant @mesny.bsky.social surprisingly uncovering that many pathogen effectors stem from ancient antimicrobials 🤯 #EffectorWisdom #EvoMPMI
August 15, 2025 at 7:58 AM
I‘m already looking forward to join this very interesting #NMR symposium and to meet friends from the good old times at @fmp-berlin.de! It’s still time to register!
⏰Join us for the NMR Symposium, Nov 26–27, 2025, celebrating our new 1.2 GHz NMR spectrometer. To present a poster, send your abstract to NMR2025@fmp-berlin.de. Registrations are open until September 15th!
August 14, 2025 at 9:27 AM
Such a beautiful cover for @jacs.acspublications.org designed by @barthvanrossum.bsky.social! Nice #NMR work by the Lange lab at @fmp-berlin.de!
Great cover art by @barthvanrossum.bsky.social for @jacs.acspublications.org: Influenza lifecycle showing M2’s roles, from activation in the low-pH endosome to viral uncoating, RNA release, and budding of new particles. View the article from the Lange lab here: pubs.acs.org/doi/10.1021/...
August 13, 2025 at 2:54 PM
Great work involving #NMR by @delvallelab.bsky.social in @jacs.acspublications.org on intrastrand side chain stapling of peptides, very interesting read!
pubs.acs.org/doi/10.1021/...
Intrastrand Peptide Staples That Promote β-Sheet Folding, Self-Assembly, and Amyloid Seeding
Side chain stapling of cysteine (Cys) residues offers convenient entry into constrained peptides with enhanced bioactivity and bioavailability. Despite its widespread application in the constraint of α-helical, PPII, and loop conformations, the stabilization of β-sheet folds via intrastrand side chain Cys stapling remains largely unexplored. Here, we demonstrate that i→i+2 stapling with E-butenyl, butynyl, and m-xylyl linkers significantly enhances the folded population of two distinct β-hairpin model peptides. High-resolution NMR structures reveal that these staples support canonical β-sheet backbone torsions and stabilize cross-strand interactions. Leveraging the maintenance of intact backbone hydrogen-bonding edges, we employed i→i+2 side chain macrocyclization in the design of constrained β-arch peptides derived from the tau protein. We show that intrastrand stapling of a nonaggregation-prone segment promotes self-assembly into β-sheet-like filaments. The resulting filaments also seed the aggregation of endogenous tau in a cell-based assay in a macrocycle- and sequence-dependent manner. These findings establish di-Cys i→i+2 stapling as a versatile and synthetically accessible method to stabilize β-sheet structure and modulate the self-assembly of seed-competent amyloidogenic peptides.
pubs.acs.org
August 11, 2025 at 10:26 AM
The complexity of new functionalities enabled by thousands of non-canonical open reading frames potentially coding for miniproteins is just fascinating! I can see a lot of interesting #NMR studies on structure and function of #peptides

www.biorxiv.org/content/10.1...
High-quality peptide evidence for annotating non-canonical open reading frames as human proteins
A major scientific drive is to characterize the protein-coding genome as it provides the primary basis for the study of human health. But the fundamental question remains: what has been missed in prio...
www.biorxiv.org
August 7, 2025 at 1:48 PM
Reposted by Daniel Friedrich
Nature research paper: Diffusing protein binders to intrinsically disordered proteins

go.nature.com/4lSCdzE
Diffusing protein binders to intrinsically disordered proteins - Nature
Using RFdiffusion, a general method for targeting intrinsically disordered proteins and regions for protein design has been developed.
go.nature.com
July 31, 2025 at 12:58 PM
Reposted by Daniel Friedrich
📢Happy to announce that we have been awarded national funding for the ARBICAT project by @ageinves.bsky.social for the next 3 years.
It's a huge honour to be leading this project as a co-PI alongside Pere Clapés, exploring NMR methods for developing new ARtificial BIoCATalysts.

#PID2024 #NMRchat
July 29, 2025 at 7:52 PM
Highly recommended read for everyone interested in interactions of proteins and DNA: Impressive new method on single cell level introduced by @epistrucstab.bsky.social from @unicologne.bsky.social!
🔬 New: Method for mapping protein-DNA interactions developed 💡
@epistrucstab.bsky.social #UniCologne has developed DynaTag, a method that detects the binding of proteins to DNA even in a single cell. This is crucial for gene regulation and the development of diseases like cancer. 🧬👇

uni.koeln/LXJQE
New method developed for mapping protein binding to DNA
A research team at the University of Cologne has developed a method called DynaTag, which can detect the binding of proteins to DNA, even in an individual cell. Interactions of proteins with DNA are c...
uni.koeln
July 28, 2025 at 10:41 AM
Great #NMR work on PTMs of histones by @roesslph.bsky.social and colleagues at @lek-lab.bsky.social!
July 22, 2025 at 11:20 AM
Great news for all students @unicologne.bsky.social interested in #structuralbiology, in particular @chemunicologne.bsky.social and at the Department of Biology: We are very honoured to receive funding through the 2025 #Fulbright-Cottrell Award!
July 8, 2025 at 9:54 PM