Reposted by Diego De Panis
It’s almost time for the Genomics for Biodiversity Conference — happening next week!
🗓️ 29–31 October
💻 Fully online & free of charge
Find all the details, including the full programme 👇
www.erga-biodiversity.eu/post/genomic...
@biogeneurope.bsky.social @ebpgenome.bsky.social #genomics #biodiversity
🗓️ 29–31 October
💻 Fully online & free of charge
Find all the details, including the full programme 👇
www.erga-biodiversity.eu/post/genomic...
@biogeneurope.bsky.social @ebpgenome.bsky.social #genomics #biodiversity
Genomics for Biodiversity Conference - from genomes to impact
29–31 October 2025Summary🗓️ Dates: 29 - 31 October 2025 (click to add to your agenda!)🔗 Online venue: ERGA YouTube ChannelWe are excited to announce the Genomics for Biodiversity Conference organised...
www.erga-biodiversity.eu
October 21, 2025 at 8:25 AM
It’s almost time for the Genomics for Biodiversity Conference — happening next week!
🗓️ 29–31 October
💻 Fully online & free of charge
Find all the details, including the full programme 👇
www.erga-biodiversity.eu/post/genomic...
@biogeneurope.bsky.social @ebpgenome.bsky.social #genomics #biodiversity
🗓️ 29–31 October
💻 Fully online & free of charge
Find all the details, including the full programme 👇
www.erga-biodiversity.eu/post/genomic...
@biogeneurope.bsky.social @ebpgenome.bsky.social #genomics #biodiversity
Reposted by Diego De Panis
How to represent genomes in 3D?
In this paper (and video), we propose Geometric Diagrams of Genomes (GDG)—a visual grammar that aims at emulating the effect ribbon diagrams (Richardson et al 1981) had in protein structural biology. Time will tell.😅
👉🏼 genomebiology.biomedcentral.com/articles/10....
In this paper (and video), we propose Geometric Diagrams of Genomes (GDG)—a visual grammar that aims at emulating the effect ribbon diagrams (Richardson et al 1981) had in protein structural biology. Time will tell.😅
👉🏼 genomebiology.biomedcentral.com/articles/10....
June 27, 2025 at 8:13 AM
How to represent genomes in 3D?
In this paper (and video), we propose Geometric Diagrams of Genomes (GDG)—a visual grammar that aims at emulating the effect ribbon diagrams (Richardson et al 1981) had in protein structural biology. Time will tell.😅
👉🏼 genomebiology.biomedcentral.com/articles/10....
In this paper (and video), we propose Geometric Diagrams of Genomes (GDG)—a visual grammar that aims at emulating the effect ribbon diagrams (Richardson et al 1981) had in protein structural biology. Time will tell.😅
👉🏼 genomebiology.biomedcentral.com/articles/10....
Deutsches Wort des Tages: Achterbahn
September 26, 2025 at 4:10 PM
Deutsches Wort des Tages: Achterbahn
Reposted by Diego De Panis
Later TODAY at 15:00 CEST! Efficient evidence-based genome annotation with EviAnn 🧬
👉 www.erga-biodiversity.eu/post/efficie... #genomeannotation #genomes #seminar #research #EviAnn @ebpgenome.bsky.social
👉 www.erga-biodiversity.eu/post/efficie... #genomeannotation #genomes #seminar #research #EviAnn @ebpgenome.bsky.social
September 23, 2025 at 7:17 AM
Later TODAY at 15:00 CEST! Efficient evidence-based genome annotation with EviAnn 🧬
👉 www.erga-biodiversity.eu/post/efficie... #genomeannotation #genomes #seminar #research #EviAnn @ebpgenome.bsky.social
👉 www.erga-biodiversity.eu/post/efficie... #genomeannotation #genomes #seminar #research #EviAnn @ebpgenome.bsky.social
Reposted by Diego De Panis
Our paper Genomic diversity of the African malaria vector Anopheles funestus was published in Science today! It features inversions, selection in action, museum specimens and putative new ecotypes. doi.org/10.1126/scie...
September 18, 2025 at 6:45 PM
Our paper Genomic diversity of the African malaria vector Anopheles funestus was published in Science today! It features inversions, selection in action, museum specimens and putative new ecotypes. doi.org/10.1126/scie...
Reposted by Diego De Panis
En el orden del día, también figura la ley que declara el "estado de emergencia del sistema científico" 👇
www.eldestapeweb.com/sociedad/cie...
www.eldestapeweb.com/sociedad/cie...
Buscan que el miércoles se trate un proyecto de ley que declara la emergencia del sistema científico
Exige al Poder Ejecutivo que cumpla con la norma 27.614, aprobada en 2021 por amplísima mayoría, que garantiza el incremento progresivo de la inversión
www.eldestapeweb.com
September 17, 2025 at 5:53 PM
En el orden del día, también figura la ley que declara el "estado de emergencia del sistema científico" 👇
www.eldestapeweb.com/sociedad/cie...
www.eldestapeweb.com/sociedad/cie...
Reposted by Diego De Panis
By the end of 2024, EBP-affiliated projects had publicly released 2'000 high-quality #genome assemblies 🧬, representing more than 500 eukaryotic families. www.frontiersin.org/journals/sci... #biodiversity #genomics
Frontiers | The Earth BioGenome Project Phase II: illuminating the eukaryotic tree of life
The Earth BioGenome Project (EBP) aims to “sequence life for the future of life” by generating high-quality reference genome sequences for all recognized euk...
www.frontiersin.org
September 4, 2025 at 4:42 PM
By the end of 2024, EBP-affiliated projects had publicly released 2'000 high-quality #genome assemblies 🧬, representing more than 500 eukaryotic families. www.frontiersin.org/journals/sci... #biodiversity #genomics
I spy a Goshawk -if I’m not mistaken- (Accipiter gentilis) chillin’ in the Botanical, what a beauty. Genome nicely assembled & curated by the colleagues from @sangerinstitute.bsky.social
Handy data note here: wellcomeopenresearch.org/articles/7-1...
Handy data note here: wellcomeopenresearch.org/articles/7-1...
September 16, 2025 at 9:09 AM
I spy a Goshawk -if I’m not mistaken- (Accipiter gentilis) chillin’ in the Botanical, what a beauty. Genome nicely assembled & curated by the colleagues from @sangerinstitute.bsky.social
Handy data note here: wellcomeopenresearch.org/articles/7-1...
Handy data note here: wellcomeopenresearch.org/articles/7-1...
Reposted by Diego De Panis
Preprint out for myloasm, our new nanopore / HiFi metagenome assembler!
Nanopore's getting accurate, but
1. Can this lead to better metagenome assemblies?
2. How, algorithmically, to leverage them?
with co-author Max Marin @mgmarin.bsky.social, supervised by Heng Li @lh3lh3.bsky.social
1 / N
Nanopore's getting accurate, but
1. Can this lead to better metagenome assemblies?
2. How, algorithmically, to leverage them?
with co-author Max Marin @mgmarin.bsky.social, supervised by Heng Li @lh3lh3.bsky.social
1 / N
High-resolution metagenome assembly for modern long reads with myloasm https://www.biorxiv.org/content/10.1101/2025.09.05.674543v1
September 7, 2025 at 11:35 PM
Preprint out for myloasm, our new nanopore / HiFi metagenome assembler!
Nanopore's getting accurate, but
1. Can this lead to better metagenome assemblies?
2. How, algorithmically, to leverage them?
with co-author Max Marin @mgmarin.bsky.social, supervised by Heng Li @lh3lh3.bsky.social
1 / N
Nanopore's getting accurate, but
1. Can this lead to better metagenome assemblies?
2. How, algorithmically, to leverage them?
with co-author Max Marin @mgmarin.bsky.social, supervised by Heng Li @lh3lh3.bsky.social
1 / N
Reposted by Diego De Panis
Earth BioGenome Project Frontiers Online Forum Deep Dive on September 18, 2025 (07:00 PT | 16:00 CEST), where we will discuss the article and chart next steps for the field. 📌 Register here: events.frontiersin.org/earth-biogen...
September 7, 2025 at 10:47 AM
Earth BioGenome Project Frontiers Online Forum Deep Dive on September 18, 2025 (07:00 PT | 16:00 CEST), where we will discuss the article and chart next steps for the field. 📌 Register here: events.frontiersin.org/earth-biogen...
Reposted by Diego De Panis
Refining Feulgen: low-cost and accurate genome size measurements for everyone https://www.biorxiv.org/content/10.1101/2025.08.29.673164v1
September 4, 2025 at 7:33 PM
Refining Feulgen: low-cost and accurate genome size measurements for everyone https://www.biorxiv.org/content/10.1101/2025.08.29.673164v1
Reposted by Diego De Panis
The European Reference Genome Atlas (ERGA) is a pan-European community initiative to coordinate the generation of reference genomes representing European eukaryotic biodiversity @ergabiodiv.bsky.social #eseb2025
August 20, 2025 at 9:06 AM
The European Reference Genome Atlas (ERGA) is a pan-European community initiative to coordinate the generation of reference genomes representing European eukaryotic biodiversity @ergabiodiv.bsky.social #eseb2025
Reposted by Diego De Panis
Come find us at the @ergabiodiv.bsky.social stand #eseb2025 exhibition hall
August 18, 2025 at 6:31 AM
Come find us at the @ergabiodiv.bsky.social stand #eseb2025 exhibition hall
Reposted by Diego De Panis
GFFx: A Rust-based suite of utilities for ultra-fast genomic feature extraction. #Genomics #Rust #GenomeAnnotation #GFF #GenomicFeatures @biorxiv-bioinfo.bsky.social 🧬 🖥️
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
August 16, 2025 at 5:07 PM
GFFx: A Rust-based suite of utilities for ultra-fast genomic feature extraction. #Genomics #Rust #GenomeAnnotation #GFF #GenomicFeatures @biorxiv-bioinfo.bsky.social 🧬 🖥️
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
Deutsches Wort des Tages: Abstoßend
August 5, 2025 at 4:18 PM
Deutsches Wort des Tages: Abstoßend
Reposted by Diego De Panis
New #BGE case study!
Researchers at UCD are using the #genome for Trifolium dubium to study its evolutionary history and beneficial traits,
which could enhance breeding programs for agriculturally important #clover species.
🔗: biodiversitygenomics.eu/2025/03/13/a...
ergabiodiv.bsky.social #DNA
Researchers at UCD are using the #genome for Trifolium dubium to study its evolutionary history and beneficial traits,
which could enhance breeding programs for agriculturally important #clover species.
🔗: biodiversitygenomics.eu/2025/03/13/a...
ergabiodiv.bsky.social #DNA
Assessing the genetic diversity of the shamrock, Trifolium dubium, across Ireland - Biodiversity Genomics Europe
Case study Assessing the genetic diversity of the shamrock, Trifolium dubium, across Ireland In 2023, a high-quality reference genome for Trifolium dubium, widely recognized as the shamrock, was gener...
biodiversitygenomics.eu
March 13, 2025 at 9:56 AM
New #BGE case study!
Researchers at UCD are using the #genome for Trifolium dubium to study its evolutionary history and beneficial traits,
which could enhance breeding programs for agriculturally important #clover species.
🔗: biodiversitygenomics.eu/2025/03/13/a...
ergabiodiv.bsky.social #DNA
Researchers at UCD are using the #genome for Trifolium dubium to study its evolutionary history and beneficial traits,
which could enhance breeding programs for agriculturally important #clover species.
🔗: biodiversitygenomics.eu/2025/03/13/a...
ergabiodiv.bsky.social #DNA
Reposted by Diego De Panis
🧬 Explore the latest from Bioinformatics Advances: "Genome Evaluation Pipeline (GEP): A fully-automated quality control tool for parallel evaluation of genome assemblies"
Full article available: https://doi.org/10.1093/bioadv/vbaf147
Authors include: @diegomics.bsky.social, @cmazzoni.bsky.social
Full article available: https://doi.org/10.1093/bioadv/vbaf147
Authors include: @diegomics.bsky.social, @cmazzoni.bsky.social
July 16, 2025 at 9:30 AM
🧬 Explore the latest from Bioinformatics Advances: "Genome Evaluation Pipeline (GEP): A fully-automated quality control tool for parallel evaluation of genome assemblies"
Full article available: https://doi.org/10.1093/bioadv/vbaf147
Authors include: @diegomics.bsky.social, @cmazzoni.bsky.social
Full article available: https://doi.org/10.1093/bioadv/vbaf147
Authors include: @diegomics.bsky.social, @cmazzoni.bsky.social
Reposted by Diego De Panis
📑Latest addition to the #openscience collection of the #European Reference #Genome Atlas (ERGA, @ergabiodiv.bsky.social) presents a the 1st #genome report for a sun spider (order Solifugae).
🔗 Find the report: doi.org/10.3897/arph...
🔍 Explore the collection to date: doi.org/10.3897/rio....
🔗 Find the report: doi.org/10.3897/arph...
🔍 Explore the collection to date: doi.org/10.3897/rio....
July 16, 2025 at 11:58 AM
📑Latest addition to the #openscience collection of the #European Reference #Genome Atlas (ERGA, @ergabiodiv.bsky.social) presents a the 1st #genome report for a sun spider (order Solifugae).
🔗 Find the report: doi.org/10.3897/arph...
🔍 Explore the collection to date: doi.org/10.3897/rio....
🔗 Find the report: doi.org/10.3897/arph...
🔍 Explore the collection to date: doi.org/10.3897/rio....
Schluss mit den Kürzungen! Hochschulen sind #unkürzbar!
July 14, 2025 at 10:19 AM
Schluss mit den Kürzungen! Hochschulen sind #unkürzbar!
Reposted by Diego De Panis
É sobre respeito e soberania.
July 12, 2025 at 2:53 PM
É sobre respeito e soberania.
Reposted by Diego De Panis
BUSCO v6.0.0 has been released. busco.ezlab.org
BUSCO - from QC to gene prediction and phylogenomics
from QC to gene prediction and phylogenomics
busco.ezlab.org
July 11, 2025 at 9:29 PM
BUSCO v6.0.0 has been released. busco.ezlab.org
Reposted by Diego De Panis
🚨 Countdown to Deadline! Apply by FRIDAY 14 July 2025
🧬 Passionate about decoding life through genomics and cutting-edge science?
👉 Apply now🧬 bit.ly/4n9AuqN
💻 If you can't join in-person, there is a hybrid option
📍 Wellcome Genome Campus
Organised by @eventswcs.bsky.social
lnkd.in/ehpwy6Ee
🧬 Passionate about decoding life through genomics and cutting-edge science?
👉 Apply now🧬 bit.ly/4n9AuqN
💻 If you can't join in-person, there is a hybrid option
📍 Wellcome Genome Campus
Organised by @eventswcs.bsky.social
lnkd.in/ehpwy6Ee
July 8, 2025 at 10:54 PM
🚨 Countdown to Deadline! Apply by FRIDAY 14 July 2025
🧬 Passionate about decoding life through genomics and cutting-edge science?
👉 Apply now🧬 bit.ly/4n9AuqN
💻 If you can't join in-person, there is a hybrid option
📍 Wellcome Genome Campus
Organised by @eventswcs.bsky.social
lnkd.in/ehpwy6Ee
🧬 Passionate about decoding life through genomics and cutting-edge science?
👉 Apply now🧬 bit.ly/4n9AuqN
💻 If you can't join in-person, there is a hybrid option
📍 Wellcome Genome Campus
Organised by @eventswcs.bsky.social
lnkd.in/ehpwy6Ee
Reposted by Diego De Panis
🤍 Con mucha felicidad le damos la bienvenida al nieto 140 a la verdad. El trabajo incansable de Abuelas de Plaza de Mayo tiene frutos.
Se trata del hijo de Graciela Romero y Raúl Metz, militantes del PRT-ERP, secuestrados en diciembre de 1976 en Cutral-Co.
Se trata del hijo de Graciela Romero y Raúl Metz, militantes del PRT-ERP, secuestrados en diciembre de 1976 en Cutral-Co.
July 7, 2025 at 6:03 PM
🤍 Con mucha felicidad le damos la bienvenida al nieto 140 a la verdad. El trabajo incansable de Abuelas de Plaza de Mayo tiene frutos.
Se trata del hijo de Graciela Romero y Raúl Metz, militantes del PRT-ERP, secuestrados en diciembre de 1976 en Cutral-Co.
Se trata del hijo de Graciela Romero y Raúl Metz, militantes del PRT-ERP, secuestrados en diciembre de 1976 en Cutral-Co.
Reposted by Diego De Panis
The Diddy verdict is the latest gruesome marker of a post-#MeToo era | Moira Donegan
The Diddy verdict is the latest gruesome marker of a post-#MeToo era | Moira Donegan
The women in the case endured horrors to tell their stories. Still the jury – and Diddy’s jubilant supporters – sided with their alleged abuser
www.theguardian.com
July 3, 2025 at 8:36 AM
The Diddy verdict is the latest gruesome marker of a post-#MeToo era | Moira Donegan
Reposted by Diego De Panis
📢 It’s time to harmonise practices for assessing genome-wide genetic diversity 🧬 Standardisation is key to meet the needs of stakeholders in biodiversity #conservation.
🔗 New publication by #ERGA
@biogeneurope.bsky.social out now in #MolecularEcology
onlinelibrary.wiley.com/doi/10.1111/...
🔗 New publication by #ERGA
@biogeneurope.bsky.social out now in #MolecularEcology
onlinelibrary.wiley.com/doi/10.1111/...
Biodiversity Genomics Research Practices Require Harmonising to Meet Stakeholder Needs in Conservation
Biodiversity resilience relies on genetic diversity, which sustains the evolutionary potential of organisms in dynamic ecosystems. Genomics is a powerful tool for accurately estimating genetic divers...
onlinelibrary.wiley.com
June 30, 2025 at 9:41 AM
📢 It’s time to harmonise practices for assessing genome-wide genetic diversity 🧬 Standardisation is key to meet the needs of stakeholders in biodiversity #conservation.
🔗 New publication by #ERGA
@biogeneurope.bsky.social out now in #MolecularEcology
onlinelibrary.wiley.com/doi/10.1111/...
🔗 New publication by #ERGA
@biogeneurope.bsky.social out now in #MolecularEcology
onlinelibrary.wiley.com/doi/10.1111/...