Damla Övek Baydar
@damlaob.bsky.social
Postdoctoral researcher at the Norwegian Centre for Molecular Biosciences and Medicine (NCMBM), University of Oslo
#generegulation #deeplearning
#generegulation #deeplearning
Reposted by Damla Övek Baydar
From @damlaob.bsky.social & colleagues in @narjournal.bsky.social #NARDatabaseIssue | #JASPAR 2026: expansion of transcription factor binding profiles and integration of deep learning models | #Bioinformatics #Genomics #Database #OpenScience #TFBS 🧬 🖥️🧪🔓
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academic.oup.com/nar/advance-...
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academic.oup.com/nar/advance-...
JASPAR 2026: expansion of transcription factor binding profiles and integration of deep learning models
Abstract. JASPAR (https://jaspar.elixir.no/) is an open-access database that has provided high-quality, manually curated, and non-redundant DNA binding pro
academic.oup.com
December 2, 2025 at 1:25 PM
From @damlaob.bsky.social & colleagues in @narjournal.bsky.social #NARDatabaseIssue | #JASPAR 2026: expansion of transcription factor binding profiles and integration of deep learning models | #Bioinformatics #Genomics #Database #OpenScience #TFBS 🧬 🖥️🧪🔓
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academic.oup.com/nar/advance-...
⬇️
academic.oup.com/nar/advance-...
Reposted by Damla Övek Baydar
Together, these approaches create a uniquely powerful platform for exploring how transcription factors interpret the genome.”
📰 Read the full story: www.med.uio.no/ncmbm/englis...
Congrats to the entire JASPAR community for driving this resource forward to shape the future of regulatory genomics!
📰 Read the full story: www.med.uio.no/ncmbm/englis...
Congrats to the entire JASPAR community for driving this resource forward to shape the future of regulatory genomics!
JASPAR goes Deep Learning!
- NCMBM - Norwegian Centre for Molecular Biosciences and Medicine
A new era for motif resourcesThe team behind JASPAR, led by Anthony Mathelier at NCMBM, has released the 11th update. JASPAR is built and maintained by an international consortium of research groups, ...
www.med.uio.no
December 2, 2025 at 7:38 AM
Together, these approaches create a uniquely powerful platform for exploring how transcription factors interpret the genome.”
📰 Read the full story: www.med.uio.no/ncmbm/englis...
Congrats to the entire JASPAR community for driving this resource forward to shape the future of regulatory genomics!
📰 Read the full story: www.med.uio.no/ncmbm/englis...
Congrats to the entire JASPAR community for driving this resource forward to shape the future of regulatory genomics!
Reposted by Damla Övek Baydar
Proud of JASPAR 2026 release with major expansion of PFM profiles and a new collection of deep learning models interpreted to extract learnt motifs!
Work led by @ievarau.bsky.social and @damlaob.bsky.social w/ @anshulkundaje.bsky.social @wywywa.bsky.social @flowerwhatelse.bsky.social labs & more
Work led by @ievarau.bsky.social and @damlaob.bsky.social w/ @anshulkundaje.bsky.social @wywywa.bsky.social @flowerwhatelse.bsky.social labs & more
🚀 JASPAR goes Deep Learning! A major milestone for regulatory genomics.
Excited to share the newest JASPAR 2026 update, led by @amathelier.bsky.social from @ncmbm.bsky.social and supported by an international network of contributors across ten countries!
📄Publication: doi.org/10.1093/nar/...
Excited to share the newest JASPAR 2026 update, led by @amathelier.bsky.social from @ncmbm.bsky.social and supported by an international network of contributors across ten countries!
📄Publication: doi.org/10.1093/nar/...
JASPAR 2026: expansion of transcription factor binding profiles and integration of deep learning models
Abstract. JASPAR (https://jaspar.elixir.no/) is an open-access database that has provided high-quality, manually curated, and non-redundant DNA binding pro
doi.org
December 2, 2025 at 7:53 AM
Proud of JASPAR 2026 release with major expansion of PFM profiles and a new collection of deep learning models interpreted to extract learnt motifs!
Work led by @ievarau.bsky.social and @damlaob.bsky.social w/ @anshulkundaje.bsky.social @wywywa.bsky.social @flowerwhatelse.bsky.social labs & more
Work led by @ievarau.bsky.social and @damlaob.bsky.social w/ @anshulkundaje.bsky.social @wywywa.bsky.social @flowerwhatelse.bsky.social labs & more
Reposted by Damla Övek Baydar
Our own Damla @damlaob.bsky.social making a great presentation of the upcoming updates of JASPAR and UniBind with BPnet DL models at #RegSys @iscb-regsys.bsky.social #ISMBECCB2025
Chat with her at her poster D-485.
Chat with her at her poster D-485.
July 23, 2025 at 11:55 AM
Our own Damla @damlaob.bsky.social making a great presentation of the upcoming updates of JASPAR and UniBind with BPnet DL models at #RegSys @iscb-regsys.bsky.social #ISMBECCB2025
Chat with her at her poster D-485.
Chat with her at her poster D-485.
Reposted by Damla Övek Baydar
Eagerly waiting for the start of #ISMBECCB2025 with @croage.bsky.social team, @kkajan.bsky.social, Marta and Ira, with the great company of @damlaob.bsky.social and @ferenckata.bsky.social for a keynote talk from John Jumper 🧬🔬
July 20, 2025 at 5:33 PM
Eagerly waiting for the start of #ISMBECCB2025 with @croage.bsky.social team, @kkajan.bsky.social, Marta and Ira, with the great company of @damlaob.bsky.social and @ferenckata.bsky.social for a keynote talk from John Jumper 🧬🔬
I'm attending #ISMBECCB2025 in Liverpool, United Kingdom from July 20-24. I’ll be giving a flash talk and presenting a poster. If you’re interested in how we’re expanding #JASPARDB with deep learning, come visit my poster!
I'm participating the ISMB/ECCB 2025 conference, join me!
Register now
invt.io
July 20, 2025 at 5:30 AM
I'm attending #ISMBECCB2025 in Liverpool, United Kingdom from July 20-24. I’ll be giving a flash talk and presenting a poster. If you’re interested in how we’re expanding #JASPARDB with deep learning, come visit my poster!
Reposted by Damla Övek Baydar
April 25, 2025 at 7:03 PM
Reposted by Damla Övek Baydar
💡 Our very own postdoc, @damlaob.bsky.social from @amathelier.bsky.social's group, has shared her thoughts on how collaborations between experimental and computational scientists can help solving health-related issues during the 5th @embl.org Partnership conference AI in One Health.
📜 Read more 👇!
📜 Read more 👇!
How is AI transforming life sciences – and what’s holding it back?
Participants of the 5th EMBL Partnership Conference share insights on data challenges, validation hurdles, and why collaboration is key.
👉 www.embl.org/news/connect...
#EMBLAIOneHealth
Participants of the 5th EMBL Partnership Conference share insights on data challenges, validation hurdles, and why collaboration is key.
👉 www.embl.org/news/connect...
#EMBLAIOneHealth
April 23, 2025 at 11:32 AM
💡 Our very own postdoc, @damlaob.bsky.social from @amathelier.bsky.social's group, has shared her thoughts on how collaborations between experimental and computational scientists can help solving health-related issues during the 5th @embl.org Partnership conference AI in One Health.
📜 Read more 👇!
📜 Read more 👇!
I have presented my poster today at the 5th EMBL Partnership Conference #EMBLAIOneHealth! It’s been a great experience sharing my work and engaging with brilliant minds. Looking forward to the insightful talks tomorrow and on Wednesday! @embl.org @nordicembl.bsky.social @ncmbm.bsky.social
March 31, 2025 at 6:56 PM
I have presented my poster today at the 5th EMBL Partnership Conference #EMBLAIOneHealth! It’s been a great experience sharing my work and engaging with brilliant minds. Looking forward to the insightful talks tomorrow and on Wednesday! @embl.org @nordicembl.bsky.social @ncmbm.bsky.social
Reposted by Damla Övek Baydar
Very much looking forward to attending the AI in one health conference at @embl.org with our EMBL partners @nordicembl.bsky.social
www.embl.org/about/info/c...
www.embl.org/about/info/c...
AI in one health
www.embl.org
March 31, 2025 at 9:28 AM
Very much looking forward to attending the AI in one health conference at @embl.org with our EMBL partners @nordicembl.bsky.social
www.embl.org/about/info/c...
www.embl.org/about/info/c...