Chloé Feltin
@chloe-feltin.bsky.social
Pinned
Chloé Feltin
@chloe-feltin.bsky.social
· Aug 11
Ecological ubiquity and phylogeny drive nestedness in phages–bacteria networks and shape the bacterial defensome
Identifying the ecological and evolutionary factors that shape phage–bacterial interactions is key to understanding their dynamics in microbial communities. Yet, such interactions remain poorly charac...
www.biorxiv.org
New preprint out! 🧬🦠🌱
What shapes #phage–bacteria #networks in #plant environments?
- Ecological origins of bacteria and phages?
- Phage taxonomy?
- Bacterial phylogeny?
- #Prophages? #Defence-systems?
📖 here: www.biorxiv.org/content/10.1...
Discover which of these actually shape the network 👇
What shapes #phage–bacteria #networks in #plant environments?
- Ecological origins of bacteria and phages?
- Phage taxonomy?
- Bacterial phylogeny?
- #Prophages? #Defence-systems?
📖 here: www.biorxiv.org/content/10.1...
Discover which of these actually shape the network 👇
Reposted by Chloé Feltin
🚨New preprint out!
We present a foundational genomic resource of human gut microbiome viruses. It delivers high-quality, deeply curated data spanning taxonomy, predicted hosts, structures, and functions, providing a reference for gut virome research. (1/8)
www.biorxiv.org/content/10.1...
We present a foundational genomic resource of human gut microbiome viruses. It delivers high-quality, deeply curated data spanning taxonomy, predicted hosts, structures, and functions, providing a reference for gut virome research. (1/8)
www.biorxiv.org/content/10.1...
November 6, 2025 at 5:26 PM
🚨New preprint out!
We present a foundational genomic resource of human gut microbiome viruses. It delivers high-quality, deeply curated data spanning taxonomy, predicted hosts, structures, and functions, providing a reference for gut virome research. (1/8)
www.biorxiv.org/content/10.1...
We present a foundational genomic resource of human gut microbiome viruses. It delivers high-quality, deeply curated data spanning taxonomy, predicted hosts, structures, and functions, providing a reference for gut virome research. (1/8)
www.biorxiv.org/content/10.1...
Reposted by Chloé Feltin
L’Europe autorise son premier additif phagique 🧫🐔 ! Une avancée pour limiter les antibiotiques… mais vigilance : l’histoire pourrait se répéter. #phages #OneHealth @phimresearch.bsky.social @inrae-dpt-spe.bsky.social @sfp-france.bsky.social
www.jle.com/fr/revues/vi...
www.jle.com/fr/revues/vi...
JLE - Virologie - Commercialisation en Europe d’un nouvel additif alimentaire à base de bactériophages dans le contexte « une seule santé » : qu’en disent les autorités réglementaires ?
www.jle.com
November 4, 2025 at 3:04 PM
L’Europe autorise son premier additif phagique 🧫🐔 ! Une avancée pour limiter les antibiotiques… mais vigilance : l’histoire pourrait se répéter. #phages #OneHealth @phimresearch.bsky.social @inrae-dpt-spe.bsky.social @sfp-france.bsky.social
www.jle.com/fr/revues/vi...
www.jle.com/fr/revues/vi...
Reposted by Chloé Feltin
New #Preprint on the #Ecology of #PercaFluviatilis is out!
What drives #Perch #Recruitment in #Lakes?
- Surface #Temperature during early development? 🌡️
- Adult #PopulationDynamics? 🐟
- Trophic conditions? 💧
Discover which factor explains 88% of interannual variability 👇
doi.org/10.1101/2025...
What drives #Perch #Recruitment in #Lakes?
- Surface #Temperature during early development? 🌡️
- Adult #PopulationDynamics? 🐟
- Trophic conditions? 💧
Discover which factor explains 88% of interannual variability 👇
doi.org/10.1101/2025...
Early-life temperature drives recruitment success in Eurasian perch (Perca fluviatilis) populations
Interannual fluctuations in the abundance of young-of-the-year (YOY) European perch ( Perca fluviatilis ) were studied in two large French peri-alpine lakes. Using a 12-year dataset of late-summer hyd...
doi.org
November 6, 2025 at 10:47 AM
New #Preprint on the #Ecology of #PercaFluviatilis is out!
What drives #Perch #Recruitment in #Lakes?
- Surface #Temperature during early development? 🌡️
- Adult #PopulationDynamics? 🐟
- Trophic conditions? 💧
Discover which factor explains 88% of interannual variability 👇
doi.org/10.1101/2025...
What drives #Perch #Recruitment in #Lakes?
- Surface #Temperature during early development? 🌡️
- Adult #PopulationDynamics? 🐟
- Trophic conditions? 💧
Discover which factor explains 88% of interannual variability 👇
doi.org/10.1101/2025...
Reposted by Chloé Feltin
🚨 New preprint! 🧬
𝐏𝐡𝐚𝐠𝐞-𝐩𝐥𝐚𝐬𝐦𝐢𝐝𝐬 (𝐏-𝐏𝐬) are fascinating elements: both 𝐭𝐞𝐦𝐩𝐞𝐫𝐚𝐭𝐞 𝐩𝐡𝐚𝐠𝐞𝐬 and 𝐩𝐥𝐚𝐬𝐦𝐢𝐝𝐬 ➡️ tricky to detect.
We present 𝐭𝐲𝐏𝐏𝐢𝐧𝐠 — the first 𝐢𝐝𝐞𝐧𝐭𝐢𝐟𝐢𝐜𝐚𝐭𝐢𝐨𝐧 𝐚𝐧𝐝 𝐜𝐥𝐚𝐬𝐬𝐢𝐟𝐢𝐜𝐚𝐭𝐢𝐨𝐧 𝐭𝐨𝐨𝐥 🛠️designed specifically for P-Ps:
✅ Accurate
✅ Sensitive
✅ Easy to use
📖 www.biorxiv.org/content/10.1...
𝐏𝐡𝐚𝐠𝐞-𝐩𝐥𝐚𝐬𝐦𝐢𝐝𝐬 (𝐏-𝐏𝐬) are fascinating elements: both 𝐭𝐞𝐦𝐩𝐞𝐫𝐚𝐭𝐞 𝐩𝐡𝐚𝐠𝐞𝐬 and 𝐩𝐥𝐚𝐬𝐦𝐢𝐝𝐬 ➡️ tricky to detect.
We present 𝐭𝐲𝐏𝐏𝐢𝐧𝐠 — the first 𝐢𝐝𝐞𝐧𝐭𝐢𝐟𝐢𝐜𝐚𝐭𝐢𝐨𝐧 𝐚𝐧𝐝 𝐜𝐥𝐚𝐬𝐬𝐢𝐟𝐢𝐜𝐚𝐭𝐢𝐨𝐧 𝐭𝐨𝐨𝐥 🛠️designed specifically for P-Ps:
✅ Accurate
✅ Sensitive
✅ Easy to use
📖 www.biorxiv.org/content/10.1...
Efficient detection and typing of phage-plasmids
Phage-plasmids are temperate phages that replicate as plasmids during lysogeny. Despite their high diversity, they carry genes similar to phages and plasmids. This leads to gene exchanges, and to the ...
www.biorxiv.org
September 3, 2025 at 1:03 PM
🚨 New preprint! 🧬
𝐏𝐡𝐚𝐠𝐞-𝐩𝐥𝐚𝐬𝐦𝐢𝐝𝐬 (𝐏-𝐏𝐬) are fascinating elements: both 𝐭𝐞𝐦𝐩𝐞𝐫𝐚𝐭𝐞 𝐩𝐡𝐚𝐠𝐞𝐬 and 𝐩𝐥𝐚𝐬𝐦𝐢𝐝𝐬 ➡️ tricky to detect.
We present 𝐭𝐲𝐏𝐏𝐢𝐧𝐠 — the first 𝐢𝐝𝐞𝐧𝐭𝐢𝐟𝐢𝐜𝐚𝐭𝐢𝐨𝐧 𝐚𝐧𝐝 𝐜𝐥𝐚𝐬𝐬𝐢𝐟𝐢𝐜𝐚𝐭𝐢𝐨𝐧 𝐭𝐨𝐨𝐥 🛠️designed specifically for P-Ps:
✅ Accurate
✅ Sensitive
✅ Easy to use
📖 www.biorxiv.org/content/10.1...
𝐏𝐡𝐚𝐠𝐞-𝐩𝐥𝐚𝐬𝐦𝐢𝐝𝐬 (𝐏-𝐏𝐬) are fascinating elements: both 𝐭𝐞𝐦𝐩𝐞𝐫𝐚𝐭𝐞 𝐩𝐡𝐚𝐠𝐞𝐬 and 𝐩𝐥𝐚𝐬𝐦𝐢𝐝𝐬 ➡️ tricky to detect.
We present 𝐭𝐲𝐏𝐏𝐢𝐧𝐠 — the first 𝐢𝐝𝐞𝐧𝐭𝐢𝐟𝐢𝐜𝐚𝐭𝐢𝐨𝐧 𝐚𝐧𝐝 𝐜𝐥𝐚𝐬𝐬𝐢𝐟𝐢𝐜𝐚𝐭𝐢𝐨𝐧 𝐭𝐨𝐨𝐥 🛠️designed specifically for P-Ps:
✅ Accurate
✅ Sensitive
✅ Easy to use
📖 www.biorxiv.org/content/10.1...
Reposted by Chloé Feltin
We also had an extraordinary session on phage-driven coevolutionary dynamics. Talks by @fredoleroux.bsky.social and her incredible datasets on vibrio phages, phage-plasmids, phage satellites and even phage-plasmid satellites & @clara-inrae.bsky.social on the phageome of apricot trees
#Phagesky
#Phagesky
August 20, 2025 at 4:59 AM
We also had an extraordinary session on phage-driven coevolutionary dynamics. Talks by @fredoleroux.bsky.social and her incredible datasets on vibrio phages, phage-plasmids, phage satellites and even phage-plasmid satellites & @clara-inrae.bsky.social on the phageome of apricot trees
#Phagesky
#Phagesky
New preprint out! 🧬🦠🌱
What shapes #phage–bacteria #networks in #plant environments?
- Ecological origins of bacteria and phages?
- Phage taxonomy?
- Bacterial phylogeny?
- #Prophages? #Defence-systems?
📖 here: www.biorxiv.org/content/10.1...
Discover which of these actually shape the network 👇
What shapes #phage–bacteria #networks in #plant environments?
- Ecological origins of bacteria and phages?
- Phage taxonomy?
- Bacterial phylogeny?
- #Prophages? #Defence-systems?
📖 here: www.biorxiv.org/content/10.1...
Discover which of these actually shape the network 👇
Ecological ubiquity and phylogeny drive nestedness in phages–bacteria networks and shape the bacterial defensome
Identifying the ecological and evolutionary factors that shape phage–bacterial interactions is key to understanding their dynamics in microbial communities. Yet, such interactions remain poorly charac...
www.biorxiv.org
August 11, 2025 at 7:46 AM
New preprint out! 🧬🦠🌱
What shapes #phage–bacteria #networks in #plant environments?
- Ecological origins of bacteria and phages?
- Phage taxonomy?
- Bacterial phylogeny?
- #Prophages? #Defence-systems?
📖 here: www.biorxiv.org/content/10.1...
Discover which of these actually shape the network 👇
What shapes #phage–bacteria #networks in #plant environments?
- Ecological origins of bacteria and phages?
- Phage taxonomy?
- Bacterial phylogeny?
- #Prophages? #Defence-systems?
📖 here: www.biorxiv.org/content/10.1...
Discover which of these actually shape the network 👇
Reposted by Chloé Feltin
Excited 🥳 to share our latest work on gut phages!
Big thanks to @epcrocha.bsky.social, Erick D, Camille d'H, @fplazaonate.bsky.social, Quentin LB, and all others involved for support and contributions! 🙌
Out in Cell Reports @cp-cellreports.bsky.social
doi.org/10.1016/j.ce...
Here's what we found 🤓
Big thanks to @epcrocha.bsky.social, Erick D, Camille d'H, @fplazaonate.bsky.social, Quentin LB, and all others involved for support and contributions! 🙌
Out in Cell Reports @cp-cellreports.bsky.social
doi.org/10.1016/j.ce...
Here's what we found 🤓
July 28, 2025 at 8:41 AM
Excited 🥳 to share our latest work on gut phages!
Big thanks to @epcrocha.bsky.social, Erick D, Camille d'H, @fplazaonate.bsky.social, Quentin LB, and all others involved for support and contributions! 🙌
Out in Cell Reports @cp-cellreports.bsky.social
doi.org/10.1016/j.ce...
Here's what we found 🤓
Big thanks to @epcrocha.bsky.social, Erick D, Camille d'H, @fplazaonate.bsky.social, Quentin LB, and all others involved for support and contributions! 🙌
Out in Cell Reports @cp-cellreports.bsky.social
doi.org/10.1016/j.ce...
Here's what we found 🤓
Finally on Blue sky ☄️
So proud, grateful, and a bit sentimental as I share this special moment of my thesis defense ! 🦠🧫🌱
A heartfelt thank you to my 3 amazing supervisors @clara-inrae.bsky.social @dbszane.bsky.social @Annette Bérard, and the wonderful defense committee ✨
So proud, grateful, and a bit sentimental as I share this special moment of my thesis defense ! 🦠🧫🌱
A heartfelt thank you to my 3 amazing supervisors @clara-inrae.bsky.social @dbszane.bsky.social @Annette Bérard, and the wonderful defense committee ✨
Congratulations to Dr. Chloé Feltin (still not on Bluesky) on an outstanding PhD defense and her pioneering work on the "Diversity and Interactions of Pseudomonas syringae Phages in Agricultural Environments". #proudPI #phages #Psyringae #INRAE
August 1, 2025 at 1:48 PM
Finally on Blue sky ☄️
So proud, grateful, and a bit sentimental as I share this special moment of my thesis defense ! 🦠🧫🌱
A heartfelt thank you to my 3 amazing supervisors @clara-inrae.bsky.social @dbszane.bsky.social @Annette Bérard, and the wonderful defense committee ✨
So proud, grateful, and a bit sentimental as I share this special moment of my thesis defense ! 🦠🧫🌱
A heartfelt thank you to my 3 amazing supervisors @clara-inrae.bsky.social @dbszane.bsky.social @Annette Bérard, and the wonderful defense committee ✨
Reposted by Chloé Feltin
Congratulations to Dr. Chloé Feltin (still not on Bluesky) on an outstanding PhD defense and her pioneering work on the "Diversity and Interactions of Pseudomonas syringae Phages in Agricultural Environments". #proudPI #phages #Psyringae #INRAE
December 5, 2024 at 9:37 AM
Congratulations to Dr. Chloé Feltin (still not on Bluesky) on an outstanding PhD defense and her pioneering work on the "Diversity and Interactions of Pseudomonas syringae Phages in Agricultural Environments". #proudPI #phages #Psyringae #INRAE
Reposted by Chloé Feltin
After many years in the making, here is our host range #phage paper with #ecology, #evolution and #biocontrol perspectives published in Molecular Ecology! @phimresearch.bsky.social @inrae-pv.bsky.social #PVBMT #JulianGarneau onlinelibrary.wiley.com/doi/10.1111/...
These are our key findings:
These are our key findings:
A Phylogenetic Host‐Range Index Reveals Ecological Constraints in Phage Specialisation and Virulence
Phages are typically known for having a limited host range, targeting particular strains within a bacterial species, but accurately measuring their specificity remains challenging. Factors like the g...
onlinelibrary.wiley.com
July 28, 2025 at 11:13 AM
After many years in the making, here is our host range #phage paper with #ecology, #evolution and #biocontrol perspectives published in Molecular Ecology! @phimresearch.bsky.social @inrae-pv.bsky.social #PVBMT #JulianGarneau onlinelibrary.wiley.com/doi/10.1111/...
These are our key findings:
These are our key findings: